Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.10G121200 Manihot esculenta HOM05D009888 ORTHO05D001895 4.9e-60 234.2 111 100.0
Manes.10G121100 Manihot esculenta HOM05D009888 ORTHO05D001895 1.8e-54 215.7 131 82.4
Manes.10G125112 Manihot esculenta HOM05D009888 ORTHO05D001895 2.2e-52 208.8 131 80.2
Manes.07G019800 Manihot esculenta HOM05D009888 ORTHO05D001895 1.0e-33 146.7 131 58.0
Manes.07G019700 Manihot esculenta HOM05D009888 ORTHO05D001895 1.6e-31 139.4 122 59.0
Potri.003G016733 Populus trichocarpa HOM05D009888 ORTHO05D001895 5.8e-29 131.0 133 51.1
Potri.003G013026 Populus trichocarpa HOM05D009888 ORTHO05D001895 9.9e-29 130.2 133 51.9
Potri.003G011875 Populus trichocarpa HOM05D009888 ORTHO05D001895 1.7e-28 129.4 131 51.9
Potri.003G013601 Populus trichocarpa HOM05D009888 ORTHO05D001895 3.8e-28 128.3 133 51.1
Potri.003G021250 Populus trichocarpa HOM05D009888 ORTHO05D001895 6.4e-28 127.5 132 51.5
Sabra03G0007500 Salix brachista HOM05D009888 ORTHO05D001895 1.1e-27 126.7 134 51.5
Potri.003G014750 Populus trichocarpa HOM05D009888 ORTHO05D001895 7.1e-27 124.0 131 50.4
Sabra03G0006600 Salix brachista HOM05D009888 ORTHO05D001895 7.9e-26 120.6 128 50.8
Sabra03G0007700 Salix brachista HOM05D009888 ORTHO05D001895 1.3e-25 119.8 132 48.5
Sabra03G0007000 Salix brachista HOM05D009888 ORTHO05D001895 8.7e-25 117.1 128 50.0
Sabra03G0007300 Salix brachista HOM05D009888 ORTHO05D001895 1.5e-24 116.3 132 48.5
Sabra03G0007600 Salix brachista HOM05D009888 ORTHO05D001895 5.6e-24 114.4 134 47.8
Sabra03G0006900 Salix brachista HOM05D009888 ORTHO05D001895 7.4e-24 114.0 132 47.7
Sabra03G0007200 Salix brachista HOM05D009888 ORTHO05D001895 1.8e-22 109.4 128 47.7
Thecc.02G027800 Theobroma cacao HOM05D002599 ORTHO05D001895 1.9e-16 89.4 123 38.2
Manes.02G167801 Manihot esculenta HOM05D009888 ORTHO05D001895 3.1e-14 82.0 75 52.0
Potri.004G219800 Populus trichocarpa HOM05D002599 ORTHO05D001895 3.1e-14 82.0 122 40.2
Thecc.02G092100 Theobroma cacao HOM05D002599 ORTHO05D001895 2.6e-13 79.0 127 36.2
Manes.07G021000 Manihot esculenta HOM05D016843 ORTHO05D001895 5.9e-13 77.8 125 35.2
Potri.004G219900 Populus trichocarpa HOM05D002599 ORTHO05D001895 7.6e-13 77.4 117 40.2
COL.COLO4_17767 Corchorus olitorius HOM05D002599 ORTHO05D001895 1.3e-12 76.6 121 38.0
Potri.004G219700 Populus trichocarpa HOM05D002599 ORTHO05D001895 2.2e-12 75.9 118 39.8
COL.COLO4_11745 Corchorus olitorius HOM05D002599 ORTHO05D001895 5.0e-12 74.7 132 32.6
Potri.004G219450 Populus trichocarpa HOM05D002599 ORTHO05D001895 1.9e-11 72.8 118 37.3
Sabra03G0006100 Salix brachista HOM05D002599 ORTHO05D001895 2.5e-11 72.4 116 39.7
COL.COLO4_25714 Corchorus olitorius HOM05D002599 ORTHO05D001895 3.2e-11 72.0 117 33.3
Sabra03G0006400 Salix brachista HOM05D002599 ORTHO05D001895 4.2e-11 71.6 120 39.2
Gohir.A13G015300 Gossypium hirsutum HOM05D002599 ORTHO05D001895 9.4e-11 70.5 116 32.8
Gohir.D13G016500 Gossypium hirsutum HOM05D002599 ORTHO05D001895 9.4e-11 70.5 116 32.8
Gorai.013G018200 Gossypium raimondii HOM05D002599 ORTHO05D001895 9.4e-11 70.5 116 32.8
Manes.07G020500 Manihot esculenta HOM05D016843 ORTHO05D001895 9.4e-11 70.5 121 33.9
Sabra07G0096500 Salix brachista HOM05D008886 ORTHO05D001895 1.2e-10 70.1 105 36.2
Manes.07G020700 Manihot esculenta HOM05D016843 ORTHO05D001895 2.1e-10 69.3 121 33.1
Thecc.10G017900 Theobroma cacao HOM05D002599 ORTHO05D001895 2.1e-10 69.3 117 33.3
Potri.011G005300 Populus trichocarpa HOM05D008886 ORTHO05D001895 3.6e-10 68.6 84 41.7
Sabra07G0096600 Salix brachista HOM05D000527 ORTHO05D017379 4.6e-10 68.2 105 35.2
Potri.003G010700 Populus trichocarpa HOM05D002599 ORTHO05D001895 6.1e-10 67.8 119 37.8
Manes.07G020550 Manihot esculenta HOM05D016843 ORTHO05D001895 7.9e-10 67.4 121 33.1
Thecc.02G091100 Theobroma cacao HOM05D002599 ORTHO05D001895 1.0e-09 67.0 128 36.7
Potri.003G011132 Populus trichocarpa HOM05D002599 ORTHO05D001895 2.3e-09 65.9 115 34.8
Potri.004G220100 Populus trichocarpa HOM05D002599 ORTHO05D001895 2.3e-09 65.9 98 37.8
Potri.004G011000 Populus trichocarpa HOM05D008886 ORTHO05D001895 3.0e-09 65.5 74 47.3
Gohir.A01G005400 Gossypium hirsutum HOM05D002599 ORTHO05D001895 3.9e-09 65.1 125 31.2
Sabra09G0045600 Salix brachista HOM05D008886 ORTHO05D001895 5.1e-09 64.7 123 34.1
Potri.004G221300 Populus trichocarpa HOM05D008886 ORTHO05D001895 8.8e-09 63.9 124 33.1
Sabra01G0167200 Salix brachista HOM05D008886 ORTHO05D001895 8.8e-09 63.9 83 39.8
Gorai.011G111100 Gossypium raimondii HOM05D002599 ORTHO05D001895 1.5e-08 63.2 118 34.7
Sabra01G0167100 Salix brachista HOM05D008886 ORTHO05D001895 1.5e-08 63.2 124 34.7
Gohir.A10G235900 Gossypium hirsutum HOM05D002599 ORTHO05D001895 1.9e-08 62.8 118 33.1
Gorai.002G006400 Gossypium raimondii HOM05D002599 ORTHO05D001895 1.9e-08 62.8 125 31.2
Gohir.D01G005500 Gossypium hirsutum HOM05D002599 ORTHO05D001895 2.5e-08 62.4 125 31.2
Potri.003G011066 Populus trichocarpa HOM05D002599 ORTHO05D001895 2.5e-08 62.4 121 35.5
Potri.007G119400 Populus trichocarpa HOM05D008886 ORTHO05D001895 2.5e-08 62.4 105 34.3
Gorai.011G286700 Gossypium raimondii HOM05D002599 ORTHO05D001895 4.3e-08 61.6 114 36.8
Gohir.D10G101400 Gossypium hirsutum HOM05D002599 ORTHO05D001895 7.4e-08 60.8 118 33.9
Potri.003G011250 Populus trichocarpa HOM05D002599 ORTHO05D001895 1.3e-07 60.1 87 37.9
Potri.011G005601 Populus trichocarpa HOM05D008886 ORTHO05D001895 1.3e-07 60.1 84 38.1
Sabra07G0096900 Salix brachista HOM05D008886 ORTHO05D001895 1.7e-07 59.7 105 32.4
Potri.011G006050 Populus trichocarpa HOM05D008886 ORTHO05D001895 2.2e-07 59.3 83 34.9
COL.COLO4_25716 Corchorus olitorius HOM05D002599 ORTHO05D001895 2.8e-07 58.9 118 32.2
Sabra07G0096300 Salix brachista HOM05D001043 ORTHO05D001895 2.8e-07 58.9 63 41.3
Sabra11G0004700 Salix brachista HOM05D008886 ORTHO05D001895 3.7e-07 58.5 88 40.9
Sabra11G0005000 Salix brachista HOM05D008886 ORTHO05D001895 3.7e-07 58.5 88 40.9
Thecc.04G012700 Theobroma cacao HOM05D002599 ORTHO05D001895 3.7e-07 58.5 96 38.5
Prupe.1G574400 Prunus persica HOM05D002599 ORTHO05D001895 4.8e-07 58.2 75 37.3
Potri.011G004900 Populus trichocarpa HOM05D008886 ORTHO05D001895 6.3e-07 57.8 85 37.6
Gohir.A01G056400 Gossypium hirsutum HOM05D002599 ORTHO05D001895 8.2e-07 57.4 76 35.5
Potri.012G013700 Populus trichocarpa HOM05D002599 ORTHO05D001895 1.1e-06 57.0 112 33.0
Sabra11G0005300 Salix brachista HOM05D008886 ORTHO05D001895 1.1e-06 57.0 85 41.2
Thecc.07G108300 Theobroma cacao HOM05D009888 ORTHO05D001895 1.4e-06 56.6 109 29.4
Thecc.07G108500 Theobroma cacao HOM05D009888 ORTHO05D001895 1.4e-06 56.6 77 35.1
Thecc.01G060200 Theobroma cacao HOM05D002599 ORTHO05D001895 1.8e-06 56.2 119 35.3
COL.COLO4_17587 Corchorus olitorius HOM05D009888 ORTHO05D001895 3.1e-06 55.5 73 41.1
Sabra01G0166800 Salix brachista HOM05D002599 ORTHO05D001895 3.1e-06 55.5 112 32.1
Sabra11G0004000 Salix brachista HOM05D008886 ORTHO05D001895 3.1e-06 55.5 83 41.0
Sabra11G0004100 Salix brachista HOM05D008886 ORTHO05D001895 3.1e-06 55.5 83 41.0
Sabra11G0004400 Salix brachista HOM05D008886 ORTHO05D001895 3.1e-06 55.5 83 41.0
Sabra11G0004600 Salix brachista HOM05D008886 ORTHO05D001895 3.1e-06 55.5 83 41.0
Sabra11G0004200 Salix brachista HOM05D008886 ORTHO05D001895 4.1e-06 55.1 83 41.0
Sabra11G0004500 Salix brachista HOM05D008886 ORTHO05D001895 4.1e-06 55.1 83 41.0
TWI14G1236 Tripterygium wilfordii HOM05D002599 ORTHO05D001895 4.1e-06 55.1 117 32.5
Gohir.D01G042900 Gossypium hirsutum HOM05D002599 ORTHO05D001895 5.3e-06 54.7 76 34.2
Gorai.002G061900 Gossypium raimondii HOM05D002599 ORTHO05D001895 5.3e-06 54.7 76 34.2
Gohir.A01G056300 Gossypium hirsutum HOM05D002599 ORTHO05D001895 6.9e-06 54.3 114 28.1
Sabra11G0005400 Salix brachista HOM05D008886 ORTHO05D001895 6.9e-06 54.3 83 39.8
AUR62019765 Chenopodium quinoa HOM05D002599 ORTHO05D001895 9.1e-06 53.9 118 33.1
Prupe.1G574200 Prunus persica HOM05D002599 ORTHO05D001895 9.1e-06 53.9 119 30.3
Sabra11G0004900 Salix brachista HOM05D008886 ORTHO05D001895 9.1e-06 53.9 83 39.8
Sabra11G0005100 Salix brachista HOM05D008886 ORTHO05D001895 9.1e-06 53.9 83 39.8


User provided reference genes

Program Settings