Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.10G121100 Manihot esculenta HOM05D009888 ORTHO05D001895 2.9e-72 275.0 131 100.0
Manes.10G125112 Manihot esculenta HOM05D009888 ORTHO05D001895 1.1e-66 256.5 131 93.9
Manes.10G121200 Manihot esculenta HOM05D009888 ORTHO05D001895 2.1e-54 215.7 131 82.4
Manes.07G019800 Manihot esculenta HOM05D009888 ORTHO05D001895 1.4e-42 176.4 131 64.9
Manes.07G019700 Manihot esculenta HOM05D009888 ORTHO05D001895 3.5e-41 171.8 122 67.2
Potri.003G016733 Populus trichocarpa HOM05D009888 ORTHO05D001895 3.3e-39 165.2 133 59.4
Potri.003G013026 Populus trichocarpa HOM05D009888 ORTHO05D001895 4.3e-39 164.9 133 60.2
Potri.003G011875 Populus trichocarpa HOM05D009888 ORTHO05D001895 2.1e-38 162.5 131 58.8
Potri.003G021250 Populus trichocarpa HOM05D009888 ORTHO05D001895 4.8e-38 161.4 130 60.0
Sabra03G0007500 Salix brachista HOM05D009888 ORTHO05D001895 8.1e-38 160.6 134 59.0
Sabra03G0006600 Salix brachista HOM05D009888 ORTHO05D001895 2.4e-37 159.1 128 60.9
Potri.003G014750 Populus trichocarpa HOM05D009888 ORTHO05D001895 1.5e-36 156.4 131 56.5
Sabra03G0007700 Salix brachista HOM05D009888 ORTHO05D001895 4.4e-36 154.8 131 56.5
Potri.003G013601 Populus trichocarpa HOM05D009888 ORTHO05D001895 4.9e-35 151.4 133 56.4
Sabra03G0006900 Salix brachista HOM05D009888 ORTHO05D001895 6.4e-35 151.0 132 56.8
Sabra03G0007300 Salix brachista HOM05D009888 ORTHO05D001895 1.0e-32 143.7 131 55.0
Sabra03G0007000 Salix brachista HOM05D009888 ORTHO05D001895 1.3e-32 143.3 128 56.2
Sabra03G0007600 Salix brachista HOM05D009888 ORTHO05D001895 6.6e-32 141.0 134 53.7
Sabra03G0007200 Salix brachista HOM05D009888 ORTHO05D001895 2.5e-31 139.0 128 54.7
Potri.004G219800 Populus trichocarpa HOM05D002599 ORTHO05D001895 7.4e-23 110.9 122 45.9
Manes.02G167801 Manihot esculenta HOM05D009888 ORTHO05D001895 2.4e-21 105.9 124 42.7
Thecc.02G027800 Theobroma cacao HOM05D002599 ORTHO05D001895 1.2e-20 103.6 123 42.3
Potri.004G219900 Populus trichocarpa HOM05D002599 ORTHO05D001895 3.4e-20 102.1 117 46.2
Potri.004G219450 Populus trichocarpa HOM05D002599 ORTHO05D001895 3.8e-19 98.6 118 41.5
Potri.003G011132 Populus trichocarpa HOM05D002599 ORTHO05D001895 1.4e-18 96.7 115 42.6
Potri.004G219700 Populus trichocarpa HOM05D002599 ORTHO05D001895 4.2e-18 95.1 118 44.1
Thecc.02G091100 Theobroma cacao HOM05D002599 ORTHO05D001895 4.2e-18 95.1 128 43.0
Gohir.D13G034950 Gossypium hirsutum HOM05D002599 ORTHO05D001895 5.5e-18 94.7 130 46.2
COL.COLO4_25714 Corchorus olitorius HOM05D002599 ORTHO05D001895 9.3e-18 94.0 117 38.5
Sabra03G0006100 Salix brachista HOM05D002599 ORTHO05D001895 9.3e-18 94.0 116 44.8
Sabra03G0006400 Salix brachista HOM05D002599 ORTHO05D001895 1.2e-17 93.6 120 44.2
Manes.07G021000 Manihot esculenta HOM05D016843 ORTHO05D001895 2.1e-17 92.8 125 40.0
Potri.003G010700 Populus trichocarpa HOM05D002599 ORTHO05D001895 2.7e-17 92.4 119 43.7
Gohir.A13G036650 Gossypium hirsutum HOM05D002599 ORTHO05D001895 3.5e-17 92.0 136 43.4
Thecc.02G092100 Theobroma cacao HOM05D002599 ORTHO05D001895 3.5e-17 92.0 125 38.4
Gorai.013G039500 Gossypium raimondii HOM05D002599 ORTHO05D001895 4.6e-17 91.7 133 45.1
Potri.003G011066 Populus trichocarpa HOM05D002599 ORTHO05D001895 6.0e-17 91.3 121 42.1
Gohir.A13G015300 Gossypium hirsutum HOM05D002599 ORTHO05D001895 7.9e-17 90.9 116 37.9
Gohir.D13G016500 Gossypium hirsutum HOM05D002599 ORTHO05D001895 7.9e-17 90.9 116 37.9
Gorai.013G018200 Gossypium raimondii HOM05D002599 ORTHO05D001895 7.9e-17 90.9 116 37.9
Potri.004G221300 Populus trichocarpa HOM05D008886 ORTHO05D001895 1.0e-16 90.5 124 38.7
Thecc.10G017900 Theobroma cacao HOM05D002599 ORTHO05D001895 1.8e-16 89.7 117 37.6
Sabra01G0167100 Salix brachista HOM05D008886 ORTHO05D001895 2.3e-16 89.4 124 40.3
Potri.011G005300 Populus trichocarpa HOM05D008886 ORTHO05D001895 3.9e-16 88.6 123 39.0
Sabra07G0096600 Salix brachista HOM05D000527 ORTHO05D017379 3.9e-16 88.6 105 39.0
COL.COLO4_17767 Corchorus olitorius HOM05D002599 ORTHO05D001895 5.1e-16 88.2 121 41.3
Gorai.011G111100 Gossypium raimondii HOM05D002599 ORTHO05D001895 6.7e-16 87.8 118 40.7
Sabra07G0096500 Salix brachista HOM05D008886 ORTHO05D001895 6.7e-16 87.8 105 40.0
Gohir.A10G235900 Gossypium hirsutum HOM05D002599 ORTHO05D001895 8.7e-16 87.4 118 39.0
Sabra09G0045600 Salix brachista HOM05D008886 ORTHO05D001895 8.7e-16 87.4 123 38.2
Thecc.02G026500 Theobroma cacao HOM05D002599 ORTHO05D001895 1.1e-15 87.0 118 41.5
Manes.07G020500 Manihot esculenta HOM05D016843 ORTHO05D001895 1.5e-15 86.7 121 38.8
Manes.07G020700 Manihot esculenta HOM05D016843 ORTHO05D001895 2.5e-15 85.9 121 38.8
Thecc.02G026200 Theobroma cacao HOM05D002599 ORTHO05D001895 2.5e-15 85.9 119 40.3
Gohir.D10G101400 Gossypium hirsutum HOM05D002599 ORTHO05D001895 3.3e-15 85.5 118 39.8
Potri.004G220100 Populus trichocarpa HOM05D002599 ORTHO05D001895 4.3e-15 85.1 103 41.7
Potri.004G011000 Populus trichocarpa HOM05D008886 ORTHO05D001895 7.4e-15 84.3 122 41.0
COL.COLO4_11745 Corchorus olitorius HOM05D002599 ORTHO05D001895 1.3e-14 83.6 132 33.3
Manes.07G020550 Manihot esculenta HOM05D016843 ORTHO05D001895 1.3e-14 83.6 121 38.0
Gorai.011G286700 Gossypium raimondii HOM05D002599 ORTHO05D001895 1.6e-14 83.2 114 42.1
Potri.015G126301 Populus trichocarpa HOM05D002599 ORTHO05D001895 2.1e-14 82.8 110 39.1
Thecc.02G026400 Theobroma cacao HOM05D002599 ORTHO05D001895 2.1e-14 82.8 119 39.5
Potri.012G013700 Populus trichocarpa HOM05D002599 ORTHO05D001895 2.8e-14 82.4 112 40.2
Sabra01G0167200 Salix brachista HOM05D008886 ORTHO05D001895 2.8e-14 82.4 107 38.3
Sabra01G0167700 Salix brachista HOM05D008886 ORTHO05D001895 2.8e-14 82.4 119 42.9
Manes.07G017475 Manihot esculenta HOM05D016843 ORTHO05D001895 3.7e-14 82.0 122 36.1
Gohir.D02G236400 Gossypium hirsutum HOM05D002599 ORTHO05D001895 4.8e-14 81.6 110 39.1
Gorai.005G264500 Gossypium raimondii HOM05D002599 ORTHO05D001895 4.8e-14 81.6 110 39.1
Thecc.02G026300 Theobroma cacao HOM05D002599 ORTHO05D001895 4.8e-14 81.6 119 38.7
Potri.007G119400 Populus trichocarpa HOM05D008886 ORTHO05D001895 6.3e-14 81.3 105 38.1
COL.COLO4_25716 Corchorus olitorius HOM05D002599 ORTHO05D001895 8.2e-14 80.9 118 39.8
Potri.011G005601 Populus trichocarpa HOM05D008886 ORTHO05D001895 1.4e-13 80.1 123 36.6
Sabra11G0004700 Salix brachista HOM05D008886 ORTHO05D001895 1.8e-13 79.7 127 39.4
Sabra11G0005000 Salix brachista HOM05D008886 ORTHO05D001895 1.8e-13 79.7 127 39.4
Potri.011G006050 Populus trichocarpa HOM05D008886 ORTHO05D001895 2.4e-13 79.3 122 33.6
Sabra01G0166800 Salix brachista HOM05D002599 ORTHO05D001895 2.4e-13 79.3 112 37.5
Potri.012G013167 Populus trichocarpa HOM05D002599 ORTHO05D001895 3.1e-13 79.0 112 41.1
Sabra11G0004000 Salix brachista HOM05D008886 ORTHO05D001895 3.1e-13 79.0 122 40.2
Sabra11G0004600 Salix brachista HOM05D008886 ORTHO05D001895 3.1e-13 79.0 122 40.2
Sabra07G0096900 Salix brachista HOM05D008886 ORTHO05D001895 5.3e-13 78.2 105 36.2
Sabra11G0004400 Salix brachista HOM05D008886 ORTHO05D001895 6.9e-13 77.8 122 39.3
Sabra15G0012100 Salix brachista HOM05D002599 ORTHO05D001895 9.0e-13 77.4 109 41.3
Thecc.10G017400 Theobroma cacao HOM05D002599 ORTHO05D001895 9.0e-13 77.4 118 35.6
Sabra11G0005300 Salix brachista HOM05D008886 ORTHO05D001895 1.2e-12 77.0 124 39.5
AUR62019765 Chenopodium quinoa HOM05D002599 ORTHO05D001895 1.5e-12 76.6 118 38.1
Sabra11G0004100 Salix brachista HOM05D008886 ORTHO05D001895 1.5e-12 76.6 122 40.2
Thecc.02G092200 Theobroma cacao HOM05D002599 ORTHO05D001895 1.5e-12 76.6 115 33.9
Gohir.A01G056400 Gossypium hirsutum HOM05D002599 ORTHO05D001895 2.0e-12 76.3 114 34.2
Sabra11G0005100 Salix brachista HOM05D008886 ORTHO05D001895 2.0e-12 76.3 122 38.5
Gohir.A01G005400 Gossypium hirsutum HOM05D002599 ORTHO05D001895 2.6e-12 75.9 125 33.6
Sabra11G0005400 Salix brachista HOM05D008886 ORTHO05D001895 3.4e-12 75.5 122 38.5
Thecc.04G012700 Theobroma cacao HOM05D002599 ORTHO05D001895 3.4e-12 75.5 96 42.7
Sabra11G0004200 Salix brachista HOM05D008886 ORTHO05D001895 4.5e-12 75.1 122 39.3
Potri.012G013000 Populus trichocarpa HOM05D002599 ORTHO05D001895 5.9e-12 74.7 114 38.6
Thecc.07G108500 Theobroma cacao HOM05D009888 ORTHO05D001895 5.9e-12 74.7 114 32.5
Sabra11G0004500 Salix brachista HOM05D008886 ORTHO05D001895 7.6e-12 74.3 122 39.3
Gohir.A01G056300 Gossypium hirsutum HOM05D002599 ORTHO05D001895 1.0e-11 73.9 114 32.5
Manes.07G017350 Manihot esculenta HOM05D016843 ORTHO05D001895 1.0e-11 73.9 121 31.4
Sabra11G0004900 Salix brachista HOM05D008886 ORTHO05D001895 1.0e-11 73.9 122 38.5
Gohir.A01G182500 Gossypium hirsutum HOM05D002599 ORTHO05D001895 1.3e-11 73.6 113 37.2
Gohir.D01G042900 Gossypium hirsutum HOM05D002599 ORTHO05D001895 1.3e-11 73.6 114 32.5
Gorai.002G006400 Gossypium raimondii HOM05D002599 ORTHO05D001895 1.3e-11 73.6 125 33.6
Gorai.002G061900 Gossypium raimondii HOM05D002599 ORTHO05D001895 1.3e-11 73.6 114 32.5
Thecc.10G017800 Theobroma cacao HOM05D002599 ORTHO05D001895 1.3e-11 73.6 119 34.5
Gohir.D01G005500 Gossypium hirsutum HOM05D002599 ORTHO05D001895 1.7e-11 73.2 125 33.6
Gorai.008G044600 Gossypium raimondii HOM05D002599 ORTHO05D001895 1.7e-11 73.2 121 33.9
Potri.011G005500 Populus trichocarpa HOM05D008886 ORTHO05D001895 1.7e-11 73.2 126 34.1
Thecc.10G017100 Theobroma cacao HOM05D002599 ORTHO05D001895 1.7e-11 73.2 115 41.7
COL.COLO4_17587 Corchorus olitorius HOM05D009888 ORTHO05D001895 2.2e-11 72.8 111 34.2
Gohir.D12G042600 Gossypium hirsutum HOM05D002599 ORTHO05D001895 2.2e-11 72.8 121 33.9
Sabra01G0167000 Salix brachista HOM05D008353 ORTHO05D001895 2.2e-11 72.8 98 40.8
Sabra11G0004300 Salix brachista HOM05D008886 ORTHO05D001895 2.2e-11 72.8 123 36.6
Sabra11G0005500 Salix brachista HOM05D008886 ORTHO05D001895 2.2e-11 72.8 107 39.3
Potri.003G011250 Populus trichocarpa HOM05D002599 ORTHO05D001895 5.0e-11 71.6 111 37.8
Thecc.07G108300 Theobroma cacao HOM05D009888 ORTHO05D001895 5.0e-11 71.6 109 32.1
Thecc.10G017300 Theobroma cacao HOM05D009631 ORTHO05D011824 5.0e-11 71.6 115 41.7
Prupe.1G574400 Prunus persica HOM05D002599 ORTHO05D001895 6.5e-11 71.2 117 33.3
Thecc.02G018800 Theobroma cacao HOM05D002599 ORTHO05D001895 6.5e-11 71.2 113 35.4
TWI14G1236 Tripterygium wilfordii HOM05D002599 ORTHO05D001895 6.5e-11 71.2 117 37.6
Gorai.002G215500 Gossypium raimondii HOM05D002599 ORTHO05D001895 8.4e-11 70.9 116 36.2
Potri.011G004900 Populus trichocarpa HOM05D008886 ORTHO05D001895 8.4e-11 70.9 127 33.9
Sabra15G0012000 Salix brachista HOM05D002599 ORTHO05D001895 8.4e-11 70.9 105 38.1
Potri.007G099100 Populus trichocarpa HOM05D002599 ORTHO05D001895 1.1e-10 70.5 117 35.9
Potri.015G015650 Populus trichocarpa HOM05D002599 ORTHO05D001895 1.1e-10 70.5 115 39.1
Atru.chr6.323 Acer truncatum HOM05D002599 ORTHO05D001895 1.4e-10 70.1 95 38.9
Gohir.A01G182400 Gossypium hirsutum HOM05D002599 ORTHO05D001895 1.4e-10 70.1 116 36.2
Gohir.A03G214900 Gossypium hirsutum HOM05D002599 ORTHO05D001895 1.4e-10 70.1 112 36.6
Manes.10G124912 Manihot esculenta HOM05D002599 ORTHO05D001895 1.4e-10 70.1 114 33.3
Potri.015G015275 Populus trichocarpa HOM05D002599 ORTHO05D001895 1.4e-10 70.1 115 39.1
Potri.015G016100 Populus trichocarpa HOM05D002599 ORTHO05D001895 1.4e-10 70.1 106 37.7
Atru.chr3.612 Acer truncatum HOM05D002599 ORTHO05D001895 2.5e-10 69.3 108 36.1
Atru.chr3.613 Acer truncatum HOM05D002599 ORTHO05D001895 2.5e-10 69.3 106 34.9
Sabra03G0009900 Salix brachista HOM05D002599 ORTHO05D001895 3.2e-10 68.9 119 35.3
Sabra07G0096300 Salix brachista HOM05D001043 ORTHO05D001895 3.2e-10 68.9 84 38.1
Potri.012G013501 Populus trichocarpa HOM05D002599 ORTHO05D001895 4.2e-10 68.6 117 39.3
Sabra03G0009000 Salix brachista HOM05D002599 ORTHO05D001895 4.2e-10 68.6 119 35.3
Sabra03G0009300 Salix brachista HOM05D002599 ORTHO05D001895 4.2e-10 68.6 119 35.3
Sabra03G0009600 Salix brachista HOM05D002599 ORTHO05D001895 4.2e-10 68.6 119 35.3
Thecc.01G060200 Theobroma cacao HOM05D002599 ORTHO05D001895 4.2e-10 68.6 119 36.1
Sabra01G0167400 Salix brachista HOM05D008886 ORTHO05D001895 5.5e-10 68.2 91 44.0
Sabra07G0097000 Salix brachista HOM05D000527 ORTHO05D017379 5.5e-10 68.2 112 33.0
Potri.012G012950 Populus trichocarpa HOM05D002599 ORTHO05D001895 7.2e-10 67.8 110 38.2
Prupe.1G574200 Prunus persica HOM05D002599 ORTHO05D001895 9.3e-10 67.4 119 34.5
Manes.10G124500 Manihot esculenta HOM05D002599 ORTHO05D001895 1.2e-09 67.0 104 28.8
Thecc.07G108200 Theobroma cacao HOM05D009888 ORTHO05D001895 1.2e-09 67.0 114 29.8
Manes.10G124600 Manihot esculenta HOM05D002599 ORTHO05D001895 2.1e-09 66.2 104 28.8
Potri.012G012850 Populus trichocarpa HOM05D002599 ORTHO05D001895 2.1e-09 66.2 110 38.2
Potri.015G014850 Populus trichocarpa HOM05D002599 ORTHO05D001895 2.1e-09 66.2 115 35.7
Potri.015G015501 Populus trichocarpa HOM05D002599 ORTHO05D001895 2.7e-09 65.9 116 37.9
Thecc.02G023500 Theobroma cacao HOM05D002599 ORTHO05D001895 2.7e-09 65.9 110 33.6
Potri.004G010850 Populus trichocarpa HOM05D008886 ORTHO05D001895 3.5e-09 65.5 102 33.3
COL.COLO4_29046 Corchorus olitorius HOM05D002599 ORTHO05D001895 6.1e-09 64.7 97 36.1
Gohir.A04G130718 Gossypium hirsutum HOM05D002599 ORTHO05D001895 6.1e-09 64.7 92 40.2
Sabra12G0018100 Salix brachista HOM05D002599 ORTHO05D001895 6.1e-09 64.7 126 33.3
Sabra12G0018200 Salix brachista HOM05D002599 ORTHO05D001895 6.1e-09 64.7 85 43.5
Ciclev10024116m.g Citrus clementina HOM05D002599 ORTHO05D001895 7.9e-09 64.3 110 37.3
Gorai.012G167500 Gossypium raimondii HOM05D002599 ORTHO05D001895 7.9e-09 64.3 92 40.2
Sabra16G0267500 Salix brachista HOM05D008886 ORTHO05D001895 7.9e-09 64.3 82 39.0
Sabra01G0165000 Salix brachista HOM05D002599 ORTHO05D001895 1.0e-08 63.9 119 33.6
Thecc.07G108400 Theobroma cacao HOM05D002599 ORTHO05D001895 1.0e-08 63.9 116 31.0
Manes.10G120000 Manihot esculenta HOM05D002599 ORTHO05D001895 1.3e-08 63.5 102 30.4
Potri.011G005400 Populus trichocarpa HOM05D008886 ORTHO05D001895 1.3e-08 63.5 125 32.8
Ciclev10003864m.g Citrus clementina HOM05D022543 ORTHO05D001895 1.8e-08 63.2 99 34.3
Potri.003G015900 Populus trichocarpa HOM05D002599 ORTHO05D001895 1.8e-08 63.2 119 34.5
Gohir.D04G176033 Gossypium hirsutum HOM05D002599 ORTHO05D001895 2.3e-08 62.8 92 40.2
Manes.10G126325 Manihot esculenta HOM05D002599 ORTHO05D001895 2.3e-08 62.8 103 30.1
Sabra07G0096700 Salix brachista HOM05D008886 ORTHO05D001895 2.3e-08 62.8 99 32.3
COL.COLO4_17753 Corchorus olitorius HOM05D002599 ORTHO05D001895 3.0e-08 62.4 107 35.5
Thecc.02G024800 Theobroma cacao HOM05D002599 ORTHO05D001895 3.0e-08 62.4 110 35.5
Sabra16G0269300 Salix brachista HOM05D008886 ORTHO05D001895 3.9e-08 62.0 91 39.6
Thecc.07G108700 Theobroma cacao HOM05D002599 ORTHO05D001895 3.9e-08 62.0 115 30.4
Potri.014G068000 Populus trichocarpa HOM05D002599 ORTHO05D001895 8.7e-08 60.8 112 33.0
EL10Ac5g12341 Beta vulgaris HOM05D035930 ORTHO05D001895 1.1e-07 60.5 107 35.5
Potri.003G010763 Populus trichocarpa HOM05D008353 ORTHO05D001895 1.1e-07 60.5 123 32.5
Sabra15G0010100 Salix brachista HOM05D002599 ORTHO05D001895 1.1e-07 60.5 113 36.3
Manes.10G122700 Manihot esculenta HOM05D002599 ORTHO05D001895 1.9e-07 59.7 119 31.9
Manes.07G021700 Manihot esculenta HOM05D002599 ORTHO05D001895 7.4e-07 57.8 118 28.0
Gohir.A04G130700 Gossypium hirsutum HOM05D002599 ORTHO05D001895 9.7e-07 57.4 105 37.1
Gorai.012G167300 Gossypium raimondii HOM05D002599 ORTHO05D001895 1.3e-06 57.0 105 38.1
Thecc.02G024900 Theobroma cacao HOM05D002599 ORTHO05D001895 1.6e-06 56.6 84 40.5
Cpa.g.sc48.191 Carica papaya HOM05D007656 ORTHO05D008529 2.2e-06 56.2 97 36.1
Gorai.012G167400 Gossypium raimondii HOM05D019153 ORTHO05D047868 2.8e-06 55.8 107 34.6
Potri.014G067900 Populus trichocarpa HOM05D002599 ORTHO05D001895 2.8e-06 55.8 114 28.9
Gohir.D04G175900 Gossypium hirsutum HOM05D002599 ORTHO05D001895 3.7e-06 55.5 105 37.1
COL.COLO4_11449 Corchorus olitorius HOM05D006446 ORTHO05D007832 4.8e-06 55.1 90 36.7
Gohir.D04G176000 Gossypium hirsutum HOM05D019153 ORTHO05D047868 4.8e-06 55.1 107 34.6
COL.COLO4_25715 Corchorus olitorius HOM05D002599 ORTHO05D001895 8.2e-06 54.3 92 26.1


User provided reference genes

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