Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.10G120901 Manihot esculenta HOM05D021322 ORTHO05D001895 8.7e-53 209.9 98 100.0
Manes.10G125000 Manihot esculenta HOM05D021322 ORTHO05D001895 6.9e-50 200.3 98 93.9
Manes.10G120700 Manihot esculenta HOM05D021322 ORTHO05D001895 1.3e-48 196.1 106 88.7
Manes.10G124900 Manihot esculenta HOM05D021322 ORTHO05D001895 9.3e-47 189.9 106 85.8
Manes.07G022100 Manihot esculenta HOM05D021322 ORTHO05D001895 9.7e-28 126.7 104 60.6
Manes.07G021900 Manihot esculenta HOM05D021322 ORTHO05D001895 2.4e-26 122.1 104 56.7
COL.COLO4_11751 Corchorus olitorius HOM05D002599 ORTHO05D001895 8.8e-13 77.0 106 40.6
Gohir.A04G130718 Gossypium hirsutum HOM05D002599 ORTHO05D001895 5.7e-12 74.3 102 37.3
Potri.003G010730 Populus trichocarpa HOM05D011361 ORTHO05D015735 5.7e-12 74.3 102 39.2
Thecc.02G027800 Theobroma cacao HOM05D002599 ORTHO05D001895 7.5e-12 73.9 105 41.0
Gohir.D12G042600 Gossypium hirsutum HOM05D002599 ORTHO05D001895 1.3e-11 73.2 106 39.6
Gorai.008G044600 Gossypium raimondii HOM05D002599 ORTHO05D001895 1.3e-11 73.2 106 39.6
Manes.10G126325 Manihot esculenta HOM05D002599 ORTHO05D001895 1.4e-10 69.7 98 40.8
Thecc.02G090900 Theobroma cacao HOM05D002599 ORTHO05D001895 1.4e-10 69.7 104 36.5
Manes.10G124500 Manihot esculenta HOM05D002599 ORTHO05D001895 2.4e-10 68.9 104 39.4
Thecc.02G092100 Theobroma cacao HOM05D002599 ORTHO05D001895 2.4e-10 68.9 104 38.5
Thecc.02G092200 Theobroma cacao HOM05D002599 ORTHO05D001895 2.4e-10 68.9 105 36.2
COL.COLO4_17767 Corchorus olitorius HOM05D002599 ORTHO05D001895 3.1e-10 68.6 107 36.4
Thecc.02G024900 Theobroma cacao HOM05D002599 ORTHO05D001895 3.1e-10 68.6 103 35.0
Gohir.A12G043200 Gossypium hirsutum HOM05D002599 ORTHO05D001895 4.1e-10 68.2 106 37.7
Gorai.012G167400 Gossypium raimondii HOM05D019153 ORTHO05D047868 4.1e-10 68.2 100 35.0
Gohir.D04G176000 Gossypium hirsutum HOM05D019153 ORTHO05D047868 7.0e-10 67.4 100 35.0
Manes.10G124600 Manihot esculenta HOM05D002599 ORTHO05D001895 1.6e-09 66.2 104 38.5
Manes.10G120000 Manihot esculenta HOM05D002599 ORTHO05D001895 2.9e-08 62.0 104 36.5
COL.COLO4_29046 Corchorus olitorius HOM05D002599 ORTHO05D001895 5.0e-08 61.2 88 36.4
Gohir.A13G015300 Gossypium hirsutum HOM05D002599 ORTHO05D001895 5.0e-08 61.2 100 34.0
Gohir.D13G016500 Gossypium hirsutum HOM05D002599 ORTHO05D001895 5.0e-08 61.2 100 34.0
Gorai.013G018200 Gossypium raimondii HOM05D002599 ORTHO05D001895 5.0e-08 61.2 100 34.0
Thecc.10G017300 Theobroma cacao HOM05D009631 ORTHO05D011824 8.5e-08 60.5 101 32.7
Sabra09G0045600 Salix brachista HOM05D008886 ORTHO05D001895 1.5e-07 59.7 99 30.3
Potri.015G015800 Populus trichocarpa HOM05D002599 ORTHO05D001895 2.5e-07 58.9 103 35.0
COL.COLO4_25715 Corchorus olitorius HOM05D002599 ORTHO05D001895 4.2e-07 58.2 88 34.1
Sabra03G0005600 Salix brachista HOM05D011361 ORTHO05D015735 5.5e-07 57.8 108 38.0
Sabra03G0005700 Salix brachista HOM05D011361 ORTHO05D015735 5.5e-07 57.8 108 38.0
Thecc.02G018800 Theobroma cacao HOM05D002599 ORTHO05D001895 5.5e-07 57.8 106 32.1
Potri.003G010466 Populus trichocarpa HOM05D011361 ORTHO05D015735 7.2e-07 57.4 110 35.5
Potri.003G010763 Populus trichocarpa HOM05D008353 ORTHO05D001895 7.2e-07 57.4 103 34.0
Potri.003G010565 Populus trichocarpa HOM05D011361 ORTHO05D015735 9.4e-07 57.0 110 35.5
Potri.003G010598 Populus trichocarpa HOM05D011361 ORTHO05D015735 9.4e-07 57.0 110 35.5
Potri.015G016450 Populus trichocarpa HOM05D002599 ORTHO05D001895 1.6e-06 56.2 105 32.4
Gohir.D12G026733 Gossypium hirsutum HOM05D002599 ORTHO05D001895 2.7e-06 55.5 106 31.1
COL.COLO4_11744 Corchorus olitorius HOM05D002599 ORTHO05D001895 8.0e-06 53.9 71 42.3


User provided reference genes

Program Settings