Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.10G110903 Manihot esculenta HOM05D053945 ORTHO05D036637 4.8e-55 217.6 112 100.0
Manes.10G110823 Manihot esculenta HOM05D053945 ORTHO05D036637 2.6e-53 211.8 112 97.3
Manes.10G111300 Manihot esculenta HOM05D000101 ORTHO05D003282 2.1e-26 122.5 110 60.9
Eucgr.J02649 Eucalyptus grandis HOM05D000101 ORTHO05D003282 3.5e-13 78.6 115 38.3
Eucgr.G00249 Eucalyptus grandis HOM05D000101 ORTHO05D003282 4.5e-13 78.2 115 38.3
TAR624G1018 Trochodendron aralioides HOM05D000101 ORTHO05D003282 1.4e-09 66.6 94 38.3
Haze_10009 Corylus avellana HOM05D000101 ORTHO05D003282 3.0e-09 65.5 80 47.5
Duzib205G1449 Durio zibethinus HOM05D000101 ORTHO05D003282 3.0e-09 65.5 92 44.6
COL.COLO4_28824 Corchorus olitorius HOM05D000101 ORTHO05D003282 2.0e-08 62.8 91 41.8
Thecc.03G111300 Theobroma cacao HOM05D000101 ORTHO05D003282 2.0e-08 62.8 92 43.5
Cfa026040 Carpinus fangiana HOM05D000101 ORTHO05D003282 4.4e-08 61.6 88 42.0
Eucgr.L01865 Eucalyptus grandis HOM05D000101 ORTHO05D003282 4.4e-08 61.6 88 40.9
QL02p102988 Quercus lobata HOM05D000101 ORTHO05D003282 5.7e-08 61.2 90 43.3
Thecc.03G111000 Theobroma cacao HOM05D000101 ORTHO05D003282 5.7e-08 61.2 92 42.4
QL02p102193 Quercus lobata HOM05D000101 ORTHO05D003282 7.5e-08 60.8 93 38.7
QL02p102834 Quercus lobata HOM05D000101 ORTHO05D003282 9.8e-08 60.5 81 40.7
Eucgr.G00087 Eucalyptus grandis HOM05D000101 ORTHO05D003282 1.3e-07 60.1 88 38.6
PGR042G3275 Punica granatum HOM05D000101 ORTHO05D003282 1.3e-07 60.1 88 40.9
QL02p102345 Quercus lobata HOM05D000101 ORTHO05D003282 1.7e-07 59.7 78 47.4
Eucgr.H05030 Eucalyptus grandis HOM05D000101 ORTHO05D003282 2.8e-07 58.9 88 37.5
Cfa026050 Carpinus fangiana HOM05D000101 ORTHO05D003282 4.8e-07 58.2 116 37.1
Eucgr.L00913 Eucalyptus grandis HOM05D000101 ORTHO05D003282 4.8e-07 58.2 88 38.6
Haze_10012 Corylus avellana HOM05D000101 ORTHO05D003282 6.3e-07 57.8 109 39.4
Gohir.A07G057900 Gossypium hirsutum HOM05D000101 ORTHO05D003282 6.3e-07 57.8 92 39.1
Gohir.D07G062700 Gossypium hirsutum HOM05D000101 ORTHO05D003282 6.3e-07 57.8 92 39.1
Gorai.001G066200 Gossypium raimondii HOM05D000101 ORTHO05D003282 6.3e-07 57.8 92 39.1
PGR042G3596 Punica granatum HOM05D000101 ORTHO05D003282 6.3e-07 57.8 88 38.6
Manes.10G114062 Manihot esculenta HOM05D000101 ORTHO05D003282 8.3e-07 57.4 93 34.4
Nn1g09693 Nelumbo nucifera HOM05D000101 ORTHO05D003282 8.3e-07 57.4 116 34.5
PGR042G0489 Punica granatum HOM05D000101 ORTHO05D036637 1.8e-06 56.2 88 37.5
Actinidia38979 Actinidia chinensis HOM05D000101 ORTHO05D003282 4.1e-06 55.1 91 38.5
QL02p102261 Quercus lobata HOM05D000101 ORTHO05D003282 4.1e-06 55.1 80 40.0
QL02p102904 Quercus lobata HOM05D000101 ORTHO05D003282 4.1e-06 55.1 90 36.7
Eucgr.G00112 Eucalyptus grandis HOM05D000101 ORTHO05D003282 5.4e-06 54.7 88 37.5
Eucgr.H05045 Eucalyptus grandis HOM05D000101 ORTHO05D003282 7.0e-06 54.3 88 36.4


User provided reference genes

Program Settings