Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.10G109500 Manihot esculenta HOM05D008739 ORTHO05D010871 4.2e-89 331.3 158 100.0
Manes.02G211000 Manihot esculenta HOM05D008739 ORTHO05D010871 1.3e-85 319.7 156 95.5
Potri.013G158300 Populus trichocarpa HOM05D008739 ORTHO05D010871 1.3e-37 160.2 163 48.5
Cpa.g.sc2.284 Carica papaya HOM05D008739 ORTHO05D010871 5.0e-26 121.7 166 42.2
Ciclev10003504m.g Citrus clementina HOM05D008739 ORTHO05D010871 7.3e-25 117.9 164 43.9
FvH4_3g40790 Fragaria vesca HOM05D008739 ORTHO05D010871 2.1e-24 116.3 160 43.8
FAN21G0180 Fragaria x ananassa HOM05D008739 ORTHO05D010871 2.1e-24 116.3 159 44.0
FAN21G0244 Fragaria x ananassa HOM05D008739 ORTHO05D010871 2.1e-24 116.3 160 43.8
FAN11G3221 Fragaria x ananassa HOM05D008739 ORTHO05D010871 3.6e-24 115.5 139 43.9
FAN16G3503 Fragaria x ananassa HOM05D008739 ORTHO05D010871 6.2e-24 114.8 139 43.9
Hma1.2p1_0161F.1_g072120 Hydrangea macrophylla HOM05D008739 ORTHO05D010871 8.0e-24 114.4 168 39.3
Peaxi162Scf00131g00137 Petunia axillaris HOM05D008739 ORTHO05D010871 1.0e-23 114.0 124 48.4
MD11G1052300 Malus domestica HOM05D008739 ORTHO05D010871 1.4e-23 113.6 154 37.0
RcHm_v2.0_Chr5g0073511 Rosa chinensis HOM05D008739 ORTHO05D010871 1.4e-23 113.6 162 43.2
ATR1127G131 Amborella trichopoda HOM05D008739 ORTHO05D010871 5.8e-22 108.2 157 38.9
Prupe.6G039900 Prunus persica HOM05D008739 ORTHO05D010871 4.9e-21 105.1 174 38.5
HanXRQChr08g0230271 Helianthus annuus HOM05D008739 ORTHO05D010871 1.9e-20 103.2 92 52.2
Sopen06g002410 Solanum pennellii HOM05D008739 ORTHO05D010871 2.4e-20 102.8 97 50.5
Phvul.008G246200 Phaseolus vulgaris HOM05D008739 ORTHO05D010871 5.4e-20 101.7 155 38.1
Migut.N00722 Erythranthe guttata HOM05D008739 ORTHO05D010871 9.2e-20 100.9 116 48.3
VMungo0647G0030 Vigna mungo HOM05D008739 ORTHO05D010871 2.7e-19 99.4 160 37.5
Thecc.10G185700 Theobroma cacao HOM05D008739 ORTHO05D010871 3.5e-19 99.0 128 43.0
COL.COLO4_19482 Corchorus olitorius HOM05D008739 ORTHO05D010871 6.0e-19 98.2 135 40.7
Lsat_1_v5_gn_9_13661 Lactuca sativa HOM05D008739 ORTHO05D010871 3.0e-18 95.9 93 48.4
SalBow2G3501 Salvia bowleyana HOM05D008739 ORTHO05D010871 2.5e-17 92.8 108 45.4
TPR.G28594 Trifolium pratense HOM05D008739 ORTHO05D010871 2.5e-17 92.8 150 38.0
Actinidia31640 Actinidia chinensis HOM05D008739 ORTHO05D010871 3.3e-17 92.4 159 35.8
Medtr5g075520 Medicago truncatula HOM05D008739 ORTHO05D010871 5.6e-17 91.7 173 34.1
DCAR_009469 Daucus carota HOM05D008739 ORTHO05D010871 9.5e-17 90.9 93 44.1
arahy.Tifrunner.gnm1.ann1.KWYB1L Arachis hypogaea HOM05D008739 ORTHO05D010871 1.2e-16 90.5 135 35.6
arahy.Tifrunner.gnm1.ann1.E8Q4P5 Arachis hypogaea HOM05D008739 ORTHO05D010871 1.1e-15 87.4 149 34.2
CiPaw.01G083500 Carya illinoinensis HOM05D008739 ORTHO05D010871 2.6e-14 82.8 96 43.8
Actinidia23835 Actinidia chinensis HOM05D000032 ORTHO05D009914 4.4e-14 82.0 108 42.6
PGR044G0285 Punica granatum HOM05D008739 ORTHO05D010871 4.4e-14 82.0 97 42.3
CiPaw.13G062800 Carya illinoinensis HOM05D008739 ORTHO05D010871 7.5e-14 81.3 115 47.8
Glyma.14G205400 Glycine max HOM05D008739 ORTHO05D010871 4.6e-11 72.0 105 37.1
Duzib114G0462 Durio zibethinus HOM05D008739 ORTHO05D010871 1.0e-10 70.9 74 40.5
Haze_24478 Corylus avellana HOM05D000224 ORTHO05D002442 1.1e-09 67.4 57 54.4
QL01p024407 Quercus lobata HOM05D008739 ORTHO05D010871 7.3e-09 64.7 107 37.4
MBI15_g32296_MAGBIO Magnolia biondii HOM05D008739 ORTHO05D010871 2.1e-08 63.2 81 38.3
SMO361G0689 Selaginella moellendorffii HOM05D007017 ORTHO05D008784 4.7e-08 62.0 96 38.5
MBI15_g46028_MAGBIO Magnolia biondii HOM05D008739 ORTHO05D010871 6.2e-08 61.6 68 41.2
SMO361G0424 Selaginella moellendorffii HOM05D007017 ORTHO05D008784 1.4e-07 60.5 91 39.6
FvH4_4g19330 Fragaria vesca HOM05D002444 ORTHO05D004748 2.6e-06 56.2 69 39.1
FAN12G1068 Fragaria x ananassa HOM05D002444 ORTHO05D004748 2.6e-06 56.2 69 39.1
FAN07G2635 Fragaria x ananassa HOM05D002444 ORTHO05D004748 3.4e-06 55.8 69 37.7
FAN12G3242 Fragaria x ananassa HOM05D002444 ORTHO05D004748 3.4e-06 55.8 69 37.7
GSVIVG01035038001 Vitis vinifera HOM05D002444 ORTHO05D004748 9.9e-06 54.3 79 38.0


User provided reference genes

Program Settings