Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.10G100511 Manihot esculenta HOM05D010549 ORTHO05D010355 6.4e-25 117.5 106 100.0
Manes.10G100844 Manihot esculenta HOM05D010549 ORTHO05D010355 6.0e-15 84.3 46 93.5
Manes.10G100275 Manihot esculenta HOM05D018722 ORTHO05D010355 1.1e-11 73.6 115 75.7
Manes.10G100025 Manihot esculenta HOM05D018722 ORTHO05D010355 8.9e-11 70.5 115 74.8
Potri.013G111632 Populus trichocarpa HOM05D010549 ORTHO05D010355 1.3e-09 66.6 121 64.5
Manes.10G100150 Manihot esculenta HOM05D018722 ORTHO05D010355 2.2e-09 65.9 115 72.2
Potri.013G111566 Populus trichocarpa HOM05D010549 ORTHO05D010355 1.4e-08 63.2 120 67.5
Potri.017G045800 Populus trichocarpa HOM05D010549 ORTHO05D010355 1.4e-08 63.2 120 67.5
Potri.017G045900 Populus trichocarpa HOM05D010549 ORTHO05D010355 3.2e-08 62.0 120 67.5
Potri.017G046400 Populus trichocarpa HOM05D010549 ORTHO05D010355 1.6e-07 59.7 120 66.7
Gohir.A13G070200 Gossypium hirsutum HOM05D007840 ORTHO05D010355 2.1e-07 59.3 48 68.8
Gohir.A13G070300 Gossypium hirsutum HOM05D007840 ORTHO05D010355 2.1e-07 59.3 48 68.8
Gorai.013G057900 Gossypium raimondii HOM05D007840 ORTHO05D022814 2.1e-07 59.3 48 68.8
Gorai.013G058000 Gossypium raimondii HOM05D007840 ORTHO05D022814 2.1e-07 59.3 48 68.8
Gohir.D13G052300 Gossypium hirsutum HOM05D007840 ORTHO05D010355 3.5e-07 58.5 104 40.4
Glyma.15G057500 Glycine max HOM05D016658 ORTHO05D010355 4.6e-07 58.2 46 67.4
Gohir.A13G067700 Gossypium hirsutum HOM05D007840 ORTHO05D010355 6.0e-07 57.8 44 70.5
Gohir.D13G051600 Gossypium hirsutum HOM05D007840 ORTHO05D022814 6.0e-07 57.8 48 66.7
Gohir.D13G051700 Gossypium hirsutum HOM05D007840 ORTHO05D022814 6.0e-07 57.8 48 66.7
Gohir.D13G051766 Gossypium hirsutum HOM05D007840 ORTHO05D022814 6.0e-07 57.8 48 66.7
Gohir.D13G051832 Gossypium hirsutum HOM05D007840 ORTHO05D010355 6.0e-07 57.8 48 66.7
Gorai.013G058300 Gossypium raimondii HOM05D007840 ORTHO05D010355 6.0e-07 57.8 105 41.0
TWI14G0428 Tripterygium wilfordii HOM05D052851 ORTHO05D010355 6.0e-07 57.8 44 68.2
Gorai.013G058200 Gossypium raimondii HOM05D007840 ORTHO05D010355 7.8e-07 57.4 48 66.7
Potri.017G045600 Populus trichocarpa HOM05D010549 ORTHO05D010355 7.8e-07 57.4 46 71.7
Gorai.013G058100 Gossypium raimondii HOM05D007840 ORTHO05D010355 1.0e-06 57.0 48 66.7
Potri.017G047000 Populus trichocarpa HOM05D010549 ORTHO05D332492 1.0e-06 57.0 46 71.7
Thecc.02G131100 Theobroma cacao HOM05D044150 ORTHO05D010355 1.0e-06 57.0 44 65.9
Potri.007G114200 Populus trichocarpa HOM05D010549 ORTHO05D010355 1.3e-06 56.6 44 72.7
Thecc.09G153700 Theobroma cacao HOM05D007840 ORTHO05D010355 1.3e-06 56.6 35 80.0
Gohir.A13G070000 Gossypium hirsutum HOM05D007840 ORTHO05D010355 1.7e-06 56.2 47 68.1
Gohir.D13G052200 Gossypium hirsutum HOM05D007840 ORTHO05D022785 1.7e-06 56.2 48 66.7
Gorai.013G056400 Gossypium raimondii HOM05D007840 ORTHO05D010355 1.7e-06 56.2 37 75.7
Gorai.N021600 Gossypium raimondii HOM05D007840 ORTHO05D010355 1.7e-06 56.2 48 64.6
Gorai.N021700 Gossypium raimondii HOM05D007840 ORTHO05D022785 1.7e-06 56.2 48 66.7
Potri.017G046100 Populus trichocarpa HOM05D010549 ORTHO05D331289 1.7e-06 56.2 120 64.2
Manes.10G100622 Manihot esculenta HOM05D038174 ORTHO05D250966 2.3e-06 55.8 129 57.4
Potri.017G046800 Populus trichocarpa HOM05D010549 ORTHO05D010355 2.3e-06 55.8 46 69.6
Gohir.A13G051800 Gossypium hirsutum HOM05D007840 ORTHO05D010355 3.0e-06 55.5 38 73.7
Gohir.D13G052100 Gossypium hirsutum HOM05D007840 ORTHO05D022785 3.0e-06 55.5 48 64.6
COL.COLO4_17724 Corchorus olitorius HOM05D007840 ORTHO05D010355 3.9e-06 55.1 36 77.8
Gohir.D13G050400 Gossypium hirsutum HOM05D007840 ORTHO05D010355 3.9e-06 55.1 38 71.1
Gohir.D13G051566 Gossypium hirsutum HOM05D007840 ORTHO05D022814 3.9e-06 55.1 48 64.6
Potri.017G046700 Populus trichocarpa HOM05D010549 ORTHO05D010355 3.9e-06 55.1 46 69.6
Gohir.D13G054000 Gossypium hirsutum HOM05D007840 ORTHO05D010355 5.1e-06 54.7 42 71.4
Gorai.013G060800 Gossypium raimondii HOM05D007840 ORTHO05D010355 5.1e-06 54.7 42 71.4
Thecc.02G131200 Theobroma cacao HOM05D007840 ORTHO05D010355 5.1e-06 54.7 133 48.9
Gohir.D13G051950 Gossypium hirsutum HOM05D007840 ORTHO05D022785 8.6e-06 53.9 48 64.6


User provided reference genes

Program Settings