Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.10G093300 Manihot esculenta HOM05D004672 ORTHO05D005732 4.1e-75 284.6 145 100.0
Manes.10G094200 Manihot esculenta HOM05D004672 ORTHO05D005732 1.4e-43 179.9 133 76.7
TWI59G0488 Tripterygium wilfordii HOM05D004672 ORTHO05D005732 4.8e-39 164.9 140 70.7
Lalb_Chr18g0060301 Lupinus albus HOM05D004672 ORTHO05D005732 1.3e-36 156.8 136 63.2
Gohir.D13G048000 Gossypium hirsutum HOM05D004672 ORTHO05D005732 2.9e-36 155.6 136 65.4
Psat1g212840 Pisum sativum HOM05D004672 ORTHO05D005732 1.4e-35 153.3 138 62.3
Sabra09G0061900 Salix brachista HOM05D004672 ORTHO05D005732 1.6e-34 149.8 144 58.3
CANSAT54G0310 Cannabis sativa HOM05D004672 ORTHO05D005732 2.1e-34 149.4 141 62.4
Ciclev10027696m.g Citrus clementina HOM05D004672 ORTHO05D005732 6.0e-34 147.9 138 63.0
Gorai.013G053600 Gossypium raimondii HOM05D004672 ORTHO05D005732 1.0e-33 147.1 136 63.2
Thecc.02G125000 Theobroma cacao HOM05D004672 ORTHO05D005732 2.3e-33 146.0 131 65.6
Potri.009G079900 Populus trichocarpa HOM05D004672 ORTHO05D005732 5.1e-33 144.8 142 59.9
Nn1g07286 Nelumbo nucifera HOM05D004672 ORTHO05D005732 1.1e-32 143.7 137 60.6
Duzib132G0551 Durio zibethinus HOM05D004672 ORTHO05D005732 1.5e-32 143.3 136 64.0
MSTRG.16633 Avicennia marina HOM05D004672 ORTHO05D005732 1.9e-32 142.9 137 61.3
RcHm_v2.0_Chr6g0269481 Rosa chinensis HOM05D004672 ORTHO05D005732 3.3e-32 142.1 146 59.6
FAN24G1132 Fragaria x ananassa HOM05D004672 ORTHO05D005732 4.3e-32 141.7 152 55.3
Gohir.A13G049500 Gossypium hirsutum HOM05D004672 ORTHO05D005732 7.4e-32 141.0 141 59.6
Potri.001G285600 Populus trichocarpa HOM05D004672 ORTHO05D005732 9.6e-32 140.6 142 60.6
FvH4_2g11160 Fragaria vesca HOM05D004672 ORTHO05D005732 1.6e-31 139.8 146 56.8
Dinv16032 Davidia involucrata HOM05D004672 ORTHO05D005732 4.8e-31 138.3 137 61.3
FAN20G2876 Fragaria x ananassa HOM05D004672 ORTHO05D005732 4.8e-31 138.3 147 56.5
MD10G1056900 Malus domestica HOM05D004672 ORTHO05D005732 1.4e-30 136.7 144 59.7
arahy.Tifrunner.gnm1.ann1.BVLY6P Arachis hypogaea HOM05D004672 ORTHO05D005732 2.4e-30 136.0 145 55.9
Atru.chr6.1354 Acer truncatum HOM05D004672 ORTHO05D005732 3.1e-30 135.6 139 59.7
TPR.G32637 Trifolium pratense HOM05D004672 ORTHO05D005732 4.0e-30 135.2 141 55.3
Phvul.006G199700 Phaseolus vulgaris HOM05D004672 ORTHO05D005732 5.3e-30 134.8 137 58.4
Glyma.13G254600 Glycine max HOM05D004672 ORTHO05D005732 9.0e-30 134.0 136 58.8
THA.LOC104799703 Tarenaya hassleriana HOM05D004672 ORTHO05D005732 9.0e-30 134.0 141 61.0
FAN15G2368 Fragaria x ananassa HOM05D004672 ORTHO05D005732 1.5e-29 133.3 136 58.1
Actinidia00323 Actinidia chinensis HOM05D004672 ORTHO05D005732 5.8e-29 131.3 137 59.1
VMungo0540G1852 Vigna mungo HOM05D004672 ORTHO05D005732 5.8e-29 131.3 140 56.4
Lj6g0005540 Lotus japonicus HOM05D004672 ORTHO05D005732 9.9e-29 130.6 137 56.2
Dinv08967 Davidia involucrata HOM05D004672 ORTHO05D005732 2.9e-28 129.0 130 61.5
vmacro19391 Vaccinium macrocarpon HOM05D004672 ORTHO05D005732 2.9e-28 129.0 139 58.3
Actinidia02411 Actinidia chinensis HOM05D004672 ORTHO05D005732 8.4e-28 127.5 138 58.0
SGA_v2.0_scaffold83G26394 Striga asiatica HOM05D004672 ORTHO05D005732 1.1e-27 127.1 134 54.5
DCAR_021895 Daucus carota HOM05D004672 ORTHO05D005732 1.4e-27 126.7 137 57.7
CAN.G504.43 Capsicum annuum HOM05D004672 ORTHO05D005732 4.2e-27 125.2 140 56.4
Eucgr.I02582 Eucalyptus grandis HOM05D004672 ORTHO05D005732 4.2e-27 125.2 139 56.1
Glyma.15G060100 Glycine max HOM05D004672 ORTHO05D005732 4.2e-27 125.2 137 54.7
Cc02_g20590 Coffea canephora HOM05D004672 ORTHO05D005732 7.1e-27 124.4 129 57.4
CsaV3_7G007430 Cucumis sativus L. HOM05D004672 ORTHO05D005732 7.1e-27 124.4 138 53.6
MD05G1049800 Malus domestica HOM05D004672 ORTHO05D005732 9.3e-27 124.0 144 55.6
Hund06479 Selenicereus undatus HOM05D004672 ORTHO05D005732 1.6e-26 123.2 145 51.7
Sed0014665 Sechium edule HOM05D004672 ORTHO05D005732 2.1e-26 122.9 142 51.4
SalBow6G5524 Salvia bowleyana HOM05D004672 ORTHO05D005732 2.7e-26 122.5 142 52.1
THA.LOC104818461 Tarenaya hassleriana HOM05D004672 ORTHO05D005732 4.6e-26 121.7 141 54.6
Carub.0008s2522 Capsella rubella HOM05D004672 ORTHO05D005732 7.9e-26 120.9 142 54.9
Sed0001753 Sechium edule HOM05D004672 ORTHO05D005732 7.9e-26 120.9 141 50.4
Sopen01g048630 Solanum pennellii HOM05D004672 ORTHO05D005732 7.9e-26 120.9 138 55.1
CSS0000676 Camellia sinensis var. sinensis HOM05D004672 ORTHO05D005732 1.0e-25 120.6 136 56.6
Aqoxy6G00637 Aquilegia oxysepala HOM05D004672 ORTHO05D005732 1.3e-25 120.2 137 50.4
CSS0013617 Camellia sinensis var. sinensis HOM05D004672 ORTHO05D005732 1.8e-25 119.8 140 54.3
Oeu042393.4 Olea europaea HOM05D004672 ORTHO05D005732 3.9e-25 118.6 138 56.5
Ca_00181_v3 Cicer arietinum L. HOM05D004672 ORTHO05D005732 6.7e-25 117.9 138 52.2
Lsat_1_v5_gn_9_113661 Lactuca sativa HOM05D004672 ORTHO05D005732 2.5e-24 115.9 141 50.4
Lsat_1_v5_gn_9_113760 Lactuca sativa HOM05D004672 ORTHO05D005732 2.5e-24 115.9 141 50.4
CiPaw.06G160900 Carya illinoinensis HOM05D004672 ORTHO05D005732 4.3e-24 115.2 172 44.8
Sabra16G0178000 Salix brachista HOM05D004672 ORTHO05D005732 4.3e-24 115.2 142 52.1
Medtr2g010110 Medicago truncatula HOM05D004672 ORTHO05D005732 1.3e-23 113.6 139 50.4
Nitab4.5_0005163g0020 Nicotiana tabacum HOM05D004672 ORTHO05D005732 1.3e-23 113.6 149 48.3
Nitab4.5_0002335g0010 Nicotiana tabacum HOM05D004672 ORTHO05D005732 1.6e-23 113.2 139 55.4
Solyc01g106220.4 Solanum lycopersicum HOM05D004672 ORTHO05D005732 1.6e-23 113.2 138 51.4
FAN27G2619 Fragaria x ananassa HOM05D004672 ORTHO05D005732 4.8e-23 111.7 147 49.0
Peaxi162Scf00016g03462 Petunia axillaris HOM05D004672 ORTHO05D005732 3.1e-22 109.0 136 51.5
Hma1.2p1_0908F.1_g235670 Hydrangea macrophylla HOM05D004672 ORTHO05D005732 6.9e-22 107.8 145 51.0
Nitab4.5_0005163g0030 Nicotiana tabacum HOM05D004672 ORTHO05D005732 6.9e-22 107.8 139 52.5
Sc06g0005830 Simmondsia chinensis HOM05D004672 ORTHO05D005732 6.9e-22 107.8 136 47.8
Duzib132G1253 Durio zibethinus HOM05D004672 ORTHO05D005732 9.0e-22 107.5 137 49.6
SHI04921 Sapria himalayana HOM05D004672 ORTHO05D005732 9.0e-22 107.5 127 52.8
arahy.Tifrunner.gnm1.ann1.GE1IDC Arachis hypogaea HOM05D004672 ORTHO05D005732 1.2e-21 107.1 144 47.9
ClCG09G016480 Citrullus lanatus HOM05D004672 ORTHO05D005732 1.2e-21 107.1 142 47.9
Lj9C342T12 Lonicera japonica HOM05D004672 ORTHO05D005732 2.6e-21 105.9 139 51.8
ATR0800G038 Amborella trichopoda HOM05D004672 ORTHO05D005732 3.4e-21 105.5 145 49.0
Haze_10395 Corylus avellana HOM05D004672 ORTHO05D005732 3.4e-21 105.5 180 42.8
GSVIVG01038520001 Vitis vinifera HOM05D004672 ORTHO05D005732 5.8e-21 104.8 136 50.0
CDE05G2025 Ceratophyllum demersum HOM05D004672 ORTHO05D005732 7.6e-21 104.4 138 48.6
C03p61860 Brassica napus HOM05D004672 ORTHO05D005732 1.0e-20 104.0 144 50.0
BolC3t18446H Brassica oleracea HOM05D004672 ORTHO05D005732 1.0e-20 104.0 144 50.0
PGR142G1680 Punica granatum HOM05D004672 ORTHO05D005732 1.0e-20 104.0 139 50.4
AT5G64420 Arabidopsis thaliana HOM05D004672 ORTHO05D005732 2.2e-20 102.8 141 50.4
Thhalv10003522m.g Eutrema salsugineum HOM05D004672 ORTHO05D005732 2.2e-20 102.8 140 50.7
Migut.B00522 Erythranthe guttata HOM05D004672 ORTHO05D005732 4.9e-20 101.7 144 47.2
AL8G41790 Arabidopsis lyrata HOM05D004672 ORTHO05D005732 1.4e-19 100.1 147 48.3
Oeu033795.2 Olea europaea HOM05D004672 ORTHO05D005732 1.4e-19 100.1 116 56.0
Sp2g27510 Schrenkiella parvula HOM05D004672 ORTHO05D005732 2.5e-19 99.4 143 49.7
AUR62027080 Chenopodium quinoa HOM05D004672 ORTHO05D005732 3.2e-19 99.0 138 47.1
CARHR278390 Cardamine hirsuta HOM05D004672 ORTHO05D005732 4.2e-19 98.6 146 48.6
AUR62030919 Chenopodium quinoa HOM05D004672 ORTHO05D005732 7.1e-19 97.8 138 47.1
TAR628G0793 Trochodendron aralioides HOM05D004672 ORTHO05D005732 9.3e-19 97.4 137 47.4
Aa31LG1G17480 Aethionema arabicum HOM05D004672 ORTHO05D005732 1.6e-18 96.7 140 47.1
PSO478G3191 Papaver somniferum HOM05D004672 ORTHO05D005732 2.1e-18 96.3 144 45.8
HanXRQChr03g0071051 Helianthus annuus HOM05D004672 ORTHO05D005732 3.5e-18 95.5 145 46.9
EL10Ac9g22127 Beta vulgaris HOM05D004672 ORTHO05D005732 4.6e-18 95.1 142 45.1
MBI16_g10454_MAGBIO Magnolia biondii HOM05D004672 ORTHO05D005732 6.0e-18 94.7 121 52.1
PGSC0003DMG400010676 Solanum tuberosum HOM05D004672 ORTHO05D005732 6.0e-18 94.7 127 48.8
PSO017G1610 Papaver somniferum HOM05D004672 ORTHO05D005732 7.9e-18 94.4 146 43.8
Prupe.8G075100 Prunus persica HOM05D004672 ORTHO05D005732 1.3e-17 93.6 143 42.0
MELO3C018559.2 Cucumis melo HOM05D004672 ORTHO05D005732 3.0e-17 92.4 153 39.2
A06p31080 Brassica napus HOM05D004672 ORTHO05D005732 5.1e-17 91.7 147 44.9
BraA06t26051Z Brassica rapa HOM05D004672 ORTHO05D005732 5.1e-17 91.7 147 44.9
Cfa004803 Carpinus fangiana HOM05D004672 ORTHO05D005732 4.3e-16 88.6 174 39.7
QL11p026607 Quercus lobata HOM05D004672 ORTHO05D005732 1.6e-15 86.7 179 40.2
BcaB07g29742 Brassica carinata HOM05D004672 ORTHO05D005732 2.8e-15 85.9 133 50.4
ECA240G2418 Erigeron canadensis HOM05D004672 ORTHO05D005732 8.2e-15 84.3 138 44.2
Os02g0135700 Oryza sativa ssp. japonica HOM05D004672 ORTHO05D005732 9.0e-14 80.9 152 39.5
SEGI_31749 Sequoiadendron giganteum HOM05D004672 ORTHO05D005732 4.5e-13 78.6 147 40.8
unitig_744.g24197 Utricularia gibba HOM05D004672 ORTHO05D005732 1.7e-12 76.6 95 50.5
vmacro06228 Vaccinium macrocarpon HOM05D004672 ORTHO05D005732 1.7e-12 76.6 141 45.4
C02p63340 Brassica napus HOM05D004672 ORTHO05D005732 1.2e-10 70.5 123 44.7
BolC2t12404H Brassica oleracea HOM05D004672 ORTHO05D005732 1.2e-10 70.5 123 44.7
HPP92_024099 Vanilla planifolia HOM05D004672 ORTHO05D005732 3.6e-10 68.9 178 33.1
Ah.01g024170 Amaranthus hybridus HOM05D004672 ORTHO05D005732 4.6e-10 68.6 132 38.6
Zm00001eb231630 Zea mays HOM05D004672 ORTHO05D005732 1.5e-08 63.5 154 36.4
Peaxi162Scf00016g03257 Petunia axillaris HOM05D004672 ORTHO05D005732 2.0e-08 63.2 135 36.3
VMungo0540G1591 Vigna mungo HOM05D003578 ORTHO05D004021 2.2e-07 59.7 44 63.6
SMO358G0564 Selaginella moellendorffii HOM05D004672 ORTHO05D005732 1.8e-06 56.6 134 33.6
Ah.01g011940 Amaranthus hybridus HOM05D004672 ORTHO05D005732 5.3e-06 55.1 44 59.1


User provided reference genes

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