Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.10G086502 Manihot esculenta HOM05D001568 ORTHO05D008804 1.1e-130 469.9 235 100.0
Manes.07G057400 Manihot esculenta HOM05D001568 ORTHO05D008804 2.4e-72 276.2 285 55.4
Haze_10309 Corylus avellana HOM05D001568 ORTHO05D008804 7.9e-60 234.6 294 47.3
CSS0011887 Camellia sinensis var. sinensis HOM05D001568 ORTHO05D008804 3.3e-58 229.2 282 48.2
Potri.001G290100 Populus trichocarpa HOM05D001568 ORTHO05D008804 1.3e-57 227.3 284 48.6
TWI14G1141 Tripterygium wilfordii HOM05D001568 ORTHO05D008804 2.2e-57 226.5 287 47.0
TAR628G1281 Trochodendron aralioides HOM05D001568 ORTHO05D008804 2.8e-57 226.1 279 46.2
Cfa004706 Carpinus fangiana HOM05D001568 ORTHO05D008804 3.7e-57 225.7 285 47.4
GSVIVG01037056001 Vitis vinifera HOM05D001568 ORTHO05D008804 4.8e-57 225.3 278 47.1
Atru.chr5.2305 Acer truncatum HOM05D001568 ORTHO05D008804 8.2e-57 224.6 282 48.6
Ciclev10030269m.g Citrus clementina HOM05D001568 ORTHO05D008804 3.1e-56 222.6 279 48.0
Thecc.02G119500 Theobroma cacao HOM05D001568 ORTHO05D008804 5.3e-56 221.9 280 47.1
Hma1.2p1_0661F.1_g198113 Hydrangea macrophylla HOM05D001568 ORTHO05D008804 3.8e-54 215.7 282 45.4
Rhsim05G0092700 Rhododendron simsii HOM05D001568 ORTHO05D008804 6.5e-54 214.9 282 45.4
Gorai.008G019500 Gossypium raimondii HOM05D001568 ORTHO05D008804 3.2e-53 212.6 284 45.1
CiPaw.05G020500 Carya illinoinensis HOM05D001568 ORTHO05D008804 7.2e-53 211.5 288 45.5
Nn5g30645 Nelumbo nucifera HOM05D001568 ORTHO05D008804 7.2e-53 211.5 277 44.0
RcHm_v2.0_Chr6g0248601 Rosa chinensis HOM05D001568 ORTHO05D008804 2.1e-52 209.9 301 43.2
Prupe.8G149200 Prunus persica HOM05D001568 ORTHO05D008804 2.3e-51 206.5 290 43.4
CANSAT25G3386 Cannabis sativa HOM05D001568 ORTHO05D008804 3.0e-51 206.1 290 44.1
EL10Ac9g22185 Beta vulgaris HOM05D001568 ORTHO05D008804 3.9e-51 205.7 274 44.5
Gohir.A12G018701 Gossypium hirsutum HOM05D001568 ORTHO05D008804 6.7e-51 204.9 284 43.7
COL.COLO4_32489 Corchorus olitorius HOM05D001568 ORTHO05D008804 1.5e-50 203.8 283 44.5
PSO170G6576 Papaver somniferum HOM05D001568 ORTHO05D008804 3.3e-50 202.6 276 43.8
Actinidia04394 Actinidia chinensis HOM05D001568 ORTHO05D008804 7.4e-50 201.4 267 45.7
Lsat_1_v5_gn_9_113380 Lactuca sativa HOM05D001568 ORTHO05D008804 7.4e-50 201.4 257 45.9
PSO017G1092 Papaver somniferum HOM05D001568 ORTHO05D008804 1.7e-49 200.3 276 43.8
Sc14g0002500 Simmondsia chinensis HOM05D001568 ORTHO05D008804 1.7e-49 200.3 258 46.1
FvH4_2g03440 Fragaria vesca HOM05D001568 ORTHO05D008804 2.8e-49 199.5 289 43.6
ECA240G3857 Erigeron canadensis HOM05D001568 ORTHO05D008804 4.8e-49 198.7 266 44.0
QL11p029473 Quercus lobata HOM05D001568 ORTHO05D008804 4.8e-49 198.7 335 40.9
Aqoxy1G00265 Aquilegia oxysepala HOM05D001568 ORTHO05D008804 8.2e-49 198.0 273 43.6
Cfa004705 Carpinus fangiana HOM05D001568 ORTHO05D008804 1.8e-48 196.8 233 48.1
Medtr1g106055 Medicago truncatula HOM05D001568 ORTHO05D008804 4.1e-48 195.7 287 41.8
Glyma.20G135600 Glycine max HOM05D001568 ORTHO05D008804 7.0e-48 194.9 275 42.5
Nitab4.5_0001099g0070 Nicotiana tabacum HOM05D001568 ORTHO05D008804 7.0e-48 194.9 263 42.6
Ca_11027_v3 Cicer arietinum L. HOM05D001568 ORTHO05D008804 1.2e-47 194.1 312 40.7
Eucgr.I02493 Eucalyptus grandis HOM05D001568 ORTHO05D008804 2.0e-47 193.4 253 46.2
HanXRQChr03g0072921 Helianthus annuus HOM05D001568 ORTHO05D008804 2.6e-47 193.0 263 43.7
Solyc01g106880.3 Solanum lycopersicum HOM05D001568 ORTHO05D008804 2.6e-47 193.0 270 42.6
Sopen01g049160 Solanum pennellii HOM05D001568 ORTHO05D008804 2.6e-47 193.0 286 41.6
AL1G57570 Arabidopsis lyrata HOM05D001568 ORTHO05D008804 3.5e-47 192.6 276 40.9
Nitab4.5_0010145g0020 Nicotiana tabacum HOM05D001568 ORTHO05D008804 4.5e-47 192.2 292 39.4
Sp1g36840 Schrenkiella parvula HOM05D001568 ORTHO05D008804 7.7e-47 191.4 276 40.9
SpUn0137_0040 Schrenkiella parvula HOM05D001568 ORTHO05D008804 7.7e-47 191.4 276 40.9
TPR.G21139 Trifolium pratense HOM05D001568 ORTHO05D008804 1.3e-46 190.7 288 42.7
Migut.B00460 Erythranthe guttata HOM05D001568 ORTHO05D008804 2.9e-46 189.5 252 43.3
AT1G50000 Arabidopsis thaliana HOM05D001568 ORTHO05D008804 5.0e-46 188.7 277 40.1
Carub.0151s0002 Capsella rubella HOM05D001568 ORTHO05D008804 5.0e-46 188.7 276 40.2
ClCG02G007120 Citrullus lanatus HOM05D001568 ORTHO05D008804 1.5e-45 187.2 268 42.9
Cc00_g17990 Coffea canephora HOM05D001568 ORTHO05D008804 1.9e-45 186.8 256 44.5
MBI16_g16470_MAGBIO Magnolia biondii HOM05D001568 ORTHO05D008804 1.9e-45 186.8 220 46.4
FAN15G2988 Fragaria x ananassa HOM05D001568 ORTHO05D008804 2.5e-45 186.4 265 41.9
Lalb_Chr06g0165001 Lupinus albus HOM05D001568 ORTHO05D008804 2.5e-45 186.4 285 40.0
MD10G1109100 Malus domestica HOM05D001568 ORTHO05D008804 2.5e-45 186.4 224 46.9
Gohir.D12G019200 Gossypium hirsutum HOM05D001568 ORTHO05D008804 3.2e-45 186.0 261 43.7
BcaB07g33452 Brassica carinata HOM05D001568 ORTHO05D008804 7.2e-45 184.9 277 40.4
Lj1g0020001 Lotus japonicus HOM05D001568 ORTHO05D008804 7.2e-45 184.9 279 39.1
THA.LOC104826495 Tarenaya hassleriana HOM05D001568 ORTHO05D008804 7.2e-45 184.9 290 39.7
BcaC08g43178 Brassica carinata HOM05D001568 ORTHO05D008804 9.4e-45 184.5 284 39.8
MELO3C018530.2 Cucumis melo HOM05D001568 ORTHO05D008804 9.4e-45 184.5 289 41.9
Lj9A337T44 Lonicera japonica HOM05D001568 ORTHO05D008804 1.2e-44 184.1 222 45.0
THA.LOC104826496 Tarenaya hassleriana HOM05D001568 ORTHO05D008804 1.2e-44 184.1 271 41.0
CAN.G606.69 Capsicum annuum HOM05D001568 ORTHO05D008804 2.7e-44 183.0 301 37.9
A06p03430 Brassica napus HOM05D001568 ORTHO05D008804 8.0e-44 181.4 282 40.1
CsaV3_7G007700 Cucumis sativus L. HOM05D001568 ORTHO05D008804 8.0e-44 181.4 269 42.0
CDE04G1257 Ceratophyllum demersum HOM05D001568 ORTHO05D008804 1.0e-43 181.0 278 40.3
ATR0739G203 Amborella trichopoda HOM05D001568 ORTHO05D008804 2.3e-43 179.9 248 42.3
DCAR_001738 Daucus carota HOM05D001568 ORTHO05D008804 2.3e-43 179.9 251 42.2
Dinv09541 Davidia involucrata HOM05D001568 ORTHO05D008804 2.3e-43 179.9 233 45.1
BolC6t35607H Brassica oleracea HOM05D001568 ORTHO05D008804 4.0e-43 179.1 285 39.6
SalBow6G4520 Salvia bowleyana HOM05D001568 ORTHO05D008804 1.1e-42 177.6 290 39.7
VMungo0720G2114 Vigna mungo HOM05D001568 ORTHO05D008804 1.1e-42 177.6 274 40.9
C06p04780 Brassica napus HOM05D001568 ORTHO05D008804 2.0e-42 176.8 285 39.3
Thhalv10011739m.g Eutrema salsugineum HOM05D001568 ORTHO05D008804 2.0e-42 176.8 246 40.2
BraA06t23551Z Brassica rapa HOM05D001568 ORTHO05D008804 5.7e-42 175.3 285 39.3
SGA_v2.0_scaffold225G43060 Striga asiatica HOM05D001568 ORTHO05D008804 9.7e-42 174.5 284 38.4
arahy.Tifrunner.gnm1.ann1.ESII2D Arachis hypogaea HOM05D001568 ORTHO05D008804 8.2e-41 171.4 229 42.4
arahy.Tifrunner.gnm1.ann1.804FU2 Arachis hypogaea HOM05D001568 ORTHO05D008804 1.8e-40 170.2 229 41.9
unitig_744.g24207 Utricularia gibba HOM05D001568 ORTHO05D008804 1.8e-40 170.2 258 39.9
Sabra16G0181700 Salix brachista HOM05D001568 ORTHO05D008804 3.1e-40 169.5 217 46.1
vmacro22256 Vaccinium macrocarpon HOM05D001568 ORTHO05D009161 1.2e-39 167.5 271 38.7
Sed0001597 Sechium edule HOM05D001568 ORTHO05D008804 2.0e-39 166.8 212 47.6
CARHR040100 Cardamine hirsuta HOM05D001568 ORTHO05D008804 2.7e-39 166.4 217 42.9
AUR62027019 Chenopodium quinoa HOM05D001568 ORTHO05D008804 7.7e-39 164.9 217 44.7
Peaxi162Scf00016g03020 Petunia axillaris HOM05D001568 ORTHO05D008804 3.8e-38 162.5 248 39.1
Hma1.2p1_0661F.1_g198116 Hydrangea macrophylla HOM05D001568 ORTHO05D008804 6.5e-38 161.8 202 45.5
HPP92_026588 Vanilla planifolia HOM05D001568 ORTHO05D008804 8.5e-38 161.4 237 38.8
Os03g0729700 Oryza sativa ssp. japonica HOM05D001568 ORTHO05D008804 9.4e-37 157.9 237 37.6
AUR62030859 Chenopodium quinoa HOM05D001568 ORTHO05D008804 2.2e-33 146.7 204 42.6
Aa31LG10G4130 Aethionema arabicum HOM05D001568 ORTHO05D008804 6.3e-33 145.2 206 40.3
Psat6g214440 Pisum sativum HOM05D001568 ORTHO05D008804 2.4e-32 143.3 168 47.0
PGR142G1084 Punica granatum HOM05D001568 ORTHO05D008804 4.1e-32 142.5 203 42.9
FAN24G1144 Fragaria x ananassa HOM05D001568 ORTHO05D008804 2.5e-29 133.3 195 43.6
Phvul.007G046900 Phaseolus vulgaris HOM05D001568 ORTHO05D008804 5.5e-29 132.1 155 48.4
AagrBONN_evm.TU.Sc2ySwM_362.475 Anthoceros agrestis HOM05D001568 ORTHO05D008804 1.6e-28 130.6 228 35.1
TAR376G0809 Trochodendron aralioides HOM05D001568 ORTHO05D008804 2.1e-28 130.2 216 43.1
Mapoly0081s0053 Marchantia polymorpha HOM05D001568 ORTHO05D008804 4.7e-28 129.0 267 32.6
Ah.01g007040 Amaranthus hybridus HOM05D001568 ORTHO05D008804 1.5e-26 124.0 175 40.6
Aqoxy335s004 Aquilegia oxysepala HOM05D001568 ORTHO05D008804 4.9e-25 119.0 104 56.7
Pp3c3_17050 Physcomitrium patens HOM05D001568 ORTHO05D008804 6.3e-25 118.6 246 32.5
SMO358G0428 Selaginella moellendorffii HOM05D001568 ORTHO05D008804 4.1e-24 115.9 221 33.9
THA.LOC104809178 Tarenaya hassleriana HOM05D001568 ORTHO05D008804 5.6e-21 105.5 165 38.8
FAN24G0164 Fragaria x ananassa HOM05D001568 ORTHO05D008804 7.5e-18 95.1 85 56.5
CBR_g48696 Chara braunii HOM05D001568 ORTHO05D008804 4.9e-17 92.4 226 28.8
MSTRG.20236 Avicennia marina HOM05D001568 ORTHO05D008804 4.1e-16 89.4 85 51.8
Thhalv10012254m.g Eutrema salsugineum HOM05D001568 ORTHO05D008804 1.0e-14 84.7 84 48.8
RhsimUnG0183700 Rhododendron simsii HOM05D002338 ORTHO05D006706 1.0e-14 84.7 224 32.6
Rhsim05G0092200 Rhododendron simsii HOM05D001568 ORTHO05D004404 5.2e-11 72.4 96 44.8
Ah.01g007020 Amaranthus hybridus HOM05D001568 ORTHO05D008804 5.4e-08 62.4 49 61.2
MCO02G312 Micromonas commoda HOM05D001568 ORTHO05D008804 1.0e-06 58.2 161 29.2
Actinidia27998 Actinidia chinensis HOM05D001568 ORTHO05D008804 1.3e-06 57.8 43 65.1


User provided reference genes

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