Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.10G076500 Manihot esculenta HOM05D006149 ORTHO05D007341 2.4e-61 239.2 177 100.0
TWI32G0763 Tripterygium wilfordii HOM05D006149 ORTHO05D007341 4.4e-47 191.8 126 80.2
Gohir.A03G186300 Gossypium hirsutum HOM05D006149 ORTHO05D007341 1.3e-46 190.3 125 84.0
Gohir.D02G207100 Gossypium hirsutum HOM05D006149 ORTHO05D007341 1.3e-46 190.3 125 84.0
Gorai.005G235000 Gossypium raimondii HOM05D006149 ORTHO05D007341 1.3e-46 190.3 125 84.0
Potri.001G300300 Populus trichocarpa HOM05D006149 ORTHO05D007341 2.2e-46 189.5 125 80.0
Sabra09G0073900 Salix brachista HOM05D006149 ORTHO05D007341 8.4e-46 187.6 125 79.2
TWI34G0529 Tripterygium wilfordii HOM05D006149 ORTHO05D007341 1.1e-45 187.2 126 81.0
COL.COLO4_32597 Corchorus olitorius HOM05D006149 ORTHO05D007341 1.9e-45 186.4 177 78.0
Ca_11076_v3 Cicer arietinum L. HOM05D006149 ORTHO05D007341 4.2e-45 185.3 125 80.8
Cpa.g.sc76.22 Carica papaya HOM05D006149 ORTHO05D007341 9.3e-45 184.1 131 76.3
Psat6g219120 Pisum sativum HOM05D006149 ORTHO05D007341 2.1e-44 183.0 125 80.0
Thecc.02G107700 Theobroma cacao HOM05D006149 ORTHO05D007341 3.5e-44 182.2 125 78.4
PGR142G0815 Punica granatum HOM05D006149 ORTHO05D007341 4.6e-44 181.8 127 78.7
Medtr1g107435 Medicago truncatula HOM05D006149 ORTHO05D007341 1.3e-43 180.3 125 79.2
Duzib052G0317 Durio zibethinus HOM05D006149 ORTHO05D007341 1.7e-43 179.9 125 78.4
VMungo0720G1566 Vigna mungo HOM05D006149 ORTHO05D007341 3.0e-43 179.1 125 78.4
RcHm_v2.0_Chr6g0255351 Rosa chinensis HOM05D006149 ORTHO05D007341 6.6e-43 177.9 125 76.8
Phvul.007G040000 Phaseolus vulgaris HOM05D006149 ORTHO05D007341 1.1e-42 177.2 125 78.4
Ciclev10029393m.g Citrus clementina HOM05D006149 ORTHO05D007341 2.5e-42 176.0 125 76.8
Lj5g0003815 Lotus japonicus HOM05D006149 ORTHO05D007341 3.3e-42 175.6 125 77.6
MD05G1089500 Malus domestica HOM05D006149 ORTHO05D007341 4.3e-42 175.3 133 72.9
arahy.Tifrunner.gnm1.ann1.0F7AFP Arachis hypogaea HOM05D006149 ORTHO05D007341 1.6e-41 173.3 126 76.2
Nn4g25119 Nelumbo nucifera HOM05D006149 ORTHO05D007341 2.8e-41 172.6 118 78.0
arahy.Tifrunner.gnm1.ann1.GUMB1Z Arachis hypogaea HOM05D006149 ORTHO05D007341 4.8e-41 171.8 126 75.4
CANSAT25G3711 Cannabis sativa HOM05D006149 ORTHO05D007341 6.2e-41 171.4 122 76.2
FAN20G0990 Fragaria x ananassa HOM05D006149 ORTHO05D007341 1.1e-40 170.6 125 75.2
Nn1g04703 Nelumbo nucifera HOM05D006149 ORTHO05D007341 1.1e-40 170.6 128 76.6
Dinv42191 Davidia involucrata HOM05D006149 ORTHO05D007341 2.4e-40 169.5 128 73.4
Glyma.20G128800 Glycine max HOM05D006149 ORTHO05D007341 2.4e-40 169.5 125 76.0
Dinv15763 Davidia involucrata HOM05D006149 ORTHO05D007341 4.0e-40 168.7 128 72.7
Cfa004575 Carpinus fangiana HOM05D006149 ORTHO05D007341 1.5e-39 166.8 125 76.0
Prupe.8G134800 Prunus persica HOM05D006149 ORTHO05D007341 1.5e-39 166.8 115 76.5
Glyma.10G262200 Glycine max HOM05D006149 ORTHO05D007341 2.0e-39 166.4 125 72.8
Sabra16G0188500 Salix brachista HOM05D006149 ORTHO05D007341 2.6e-39 166.0 167 57.5
CSS0036049 Camellia sinensis var. sinensis HOM05D006149 ORTHO05D007341 4.4e-39 165.2 127 72.4
vmacro19450 Vaccinium macrocarpon HOM05D006149 ORTHO05D007341 4.4e-39 165.2 129 70.5
Lj9A321G81 Lonicera japonica HOM05D006149 ORTHO05D007341 5.8e-39 164.9 118 72.9
Rhsim05G0088300 Rhododendron simsii HOM05D006149 ORTHO05D007341 7.6e-39 164.5 129 70.5
unitig_22.g5723 Utricularia gibba HOM05D006149 ORTHO05D007341 9.9e-39 164.1 127 73.2
Sc08g0001390 Simmondsia chinensis HOM05D006149 ORTHO05D007341 1.3e-38 163.7 106 81.1
FvH4_2g05220 Fragaria vesca HOM05D006149 ORTHO05D007341 1.7e-38 163.3 125 72.0
FAN15G1894 Fragaria x ananassa HOM05D006149 ORTHO05D007341 1.7e-38 163.3 125 72.0
FAN24G0478 Fragaria x ananassa HOM05D000289 ORTHO05D007341 1.7e-38 163.3 125 72.0
Nitab4.5_0002815g0010 Nicotiana tabacum HOM05D006149 ORTHO05D007341 2.9e-38 162.5 115 74.8
Nitab4.5_0005392g0090 Nicotiana tabacum HOM05D006149 ORTHO05D007341 2.9e-38 162.5 115 74.8
MELO3C019546.2 Cucumis melo HOM05D006149 ORTHO05D007341 4.9e-38 161.8 126 72.2
FAN27G1351 Fragaria x ananassa HOM05D000289 ORTHO05D007341 4.9e-38 161.8 125 71.2
ClCG05G010280 Citrullus lanatus HOM05D006149 ORTHO05D007341 8.4e-38 161.0 125 72.8
Sed0008540 Sechium edule HOM05D006149 ORTHO05D007341 8.4e-38 161.0 126 73.0
Hund06318 Selenicereus undatus HOM05D006149 ORTHO05D007341 8.4e-38 161.0 132 70.5
SHI05287 Sapria himalayana HOM05D006149 ORTHO05D007341 1.1e-37 160.6 125 72.0
Sed0001717 Sechium edule HOM05D006149 ORTHO05D007341 1.1e-37 160.6 129 69.8
THA.LOC104807242 Tarenaya hassleriana HOM05D006149 ORTHO05D007341 1.9e-37 159.8 127 68.5
TAR628G0594 Trochodendron aralioides HOM05D006149 ORTHO05D007341 1.9e-37 159.8 118 72.0
CsaV3_3G018210 Cucumis sativus L. HOM05D006149 ORTHO05D007341 3.2e-37 159.1 126 71.4
SGA_v2.0_scaffold225G43080 Striga asiatica HOM05D006149 ORTHO05D007341 7.1e-37 157.9 116 74.1
Lalb_Chr21g0308351 Lupinus albus HOM05D006149 ORTHO05D007341 9.3e-37 157.5 123 69.9
Sopen01g049800 Solanum pennellii HOM05D006149 ORTHO05D007341 1.2e-36 157.1 114 71.1
PGSC0003DMG400025768 Solanum tuberosum HOM05D006149 ORTHO05D007341 1.2e-36 157.1 114 71.1
AUR62039082 Chenopodium quinoa HOM05D006149 ORTHO05D007341 2.7e-36 156.0 130 66.9
CAN.G1231.7 Capsicum annuum HOM05D006149 ORTHO05D007341 3.5e-36 155.6 115 71.3
CDE02G2507 Ceratophyllum demersum HOM05D006149 ORTHO05D007341 6.0e-36 154.8 119 73.1
Duzib248G1531 Durio zibethinus HOM05D006149 ORTHO05D007341 7.9e-36 154.5 125 74.4
Solyc01g107610.4 Solanum lycopersicum HOM05D006149 ORTHO05D007341 7.9e-36 154.5 114 70.2
Actinidia27971 Actinidia chinensis HOM05D006149 ORTHO05D007341 1.0e-35 154.1 130 67.7
Eucgr.E02957 Eucalyptus grandis HOM05D006149 ORTHO05D007341 1.7e-35 153.3 125 68.8
MD05G1088900 Malus domestica HOM05D006149 ORTHO05D007341 1.7e-35 153.3 179 54.2
CDE02G4185 Ceratophyllum demersum HOM05D006149 ORTHO05D007341 2.3e-35 152.9 119 72.3
ECA240G2462 Erigeron canadensis HOM05D006149 ORTHO05D007341 2.3e-35 152.9 131 67.2
Lsat_1_v5_gn_9_111221 Lactuca sativa HOM05D006149 ORTHO05D007341 3.9e-35 152.1 130 66.2
SalBow6G4084 Salvia bowleyana HOM05D006149 ORTHO05D007341 1.5e-34 150.2 127 65.4
CiPaw.05G011400 Carya illinoinensis HOM05D006149 ORTHO05D007341 3.3e-34 149.1 116 70.7
CDE04G1609 Ceratophyllum demersum HOM05D006149 ORTHO05D007341 3.3e-34 149.1 119 69.7
HanXRQChr03g0070291 Helianthus annuus HOM05D006149 ORTHO05D007341 3.3e-34 149.1 132 65.9
ATR0618G054 Amborella trichopoda HOM05D006149 ORTHO05D007341 2.1e-33 146.4 107 74.8
MSTRG.16714 Avicennia marina HOM05D006149 ORTHO05D007341 2.1e-33 146.4 128 65.6
Peaxi162Scf00016g02334 Petunia axillaris HOM05D006149 ORTHO05D007341 2.1e-33 146.4 125 68.8
QL11p033743 Quercus lobata HOM05D006149 ORTHO05D007341 3.6e-33 145.6 157 58.0
Aa31LG8G13110 Aethionema arabicum HOM05D006149 ORTHO05D007341 4.8e-33 145.2 91 80.2
CARHR105640 Cardamine hirsuta HOM05D006149 ORTHO05D007341 4.8e-33 145.2 125 65.6
Migut.B00388 Erythranthe guttata HOM05D006149 ORTHO05D007341 6.2e-33 144.8 120 66.7
Sp3g28510 Schrenkiella parvula HOM05D006149 ORTHO05D007341 8.1e-33 144.4 125 64.0
Carub.0003s2910 Capsella rubella HOM05D006149 ORTHO05D007341 1.1e-32 144.1 123 65.0
HPP92_004777 Vanilla planifolia HOM05D006149 ORTHO05D007341 1.4e-32 143.7 93 82.8
BcaB03g16271 Brassica carinata HOM05D006149 ORTHO05D007341 1.8e-32 143.3 125 64.0
BcaC06g36046 Brassica carinata HOM05D006149 ORTHO05D007341 1.8e-32 143.3 125 64.0
Thhalv10022867m.g Eutrema salsugineum HOM05D006149 ORTHO05D007341 1.8e-32 143.3 125 63.2
BcaC04g22139 Brassica carinata HOM05D006149 ORTHO05D007341 2.4e-32 142.9 125 63.2
C07p08530 Brassica napus HOM05D006149 ORTHO05D007341 2.4e-32 142.9 125 63.2
BolC7t41265H Brassica oleracea HOM05D006149 ORTHO05D007341 2.4e-32 142.9 125 63.2
AL3G46990 Arabidopsis lyrata HOM05D006149 ORTHO05D007341 3.1e-32 142.5 125 64.0
Oeu017469.1 Olea europaea HOM05D006149 ORTHO05D007341 3.1e-32 142.5 116 68.1
AT2G15270 Arabidopsis thaliana HOM05D006149 ORTHO05D007341 5.3e-32 141.7 124 63.7
Rhsim11G0160200 Rhododendron simsii HOM05D006149 ORTHO05D007341 6.9e-32 141.4 180 50.6
Os09g0104300 Oryza sativa ssp. japonica HOM05D006149 ORTHO05D007341 9.0e-32 141.0 125 64.8
Aqoxy3G02908 Aquilegia oxysepala HOM05D006149 ORTHO05D007341 1.2e-31 140.6 125 65.6
PSO541G1364 Papaver somniferum HOM05D006149 ORTHO05D007341 3.4e-31 139.0 122 60.7
A07p05350 Brassica napus HOM05D006149 ORTHO05D007341 5.8e-31 138.3 126 61.1
BraA07t28328Z Brassica rapa HOM05D006149 ORTHO05D007341 5.8e-31 138.3 126 61.1
PSO675G5876 Papaver somniferum HOM05D006149 ORTHO05D007341 7.6e-31 137.9 122 59.0
BcaB08g34585 Brassica carinata HOM05D006149 ORTHO05D007341 3.8e-30 135.6 125 60.0
AUR62010304 Chenopodium quinoa HOM05D006149 ORTHO05D007341 3.8e-30 135.6 114 66.7
THA.LOC104819555 Tarenaya hassleriana HOM05D006149 ORTHO05D007341 4.9e-30 135.2 76 90.8
Zm00001eb393310 Zea mays HOM05D006149 ORTHO05D007341 6.4e-30 134.8 118 66.1
Zm00001eb020500 Zea mays HOM05D006149 ORTHO05D007341 1.4e-29 133.7 77 87.0
CANSAT25G0333 Cannabis sativa HOM05D006149 ORTHO05D007341 7.1e-29 131.3 113 65.5
SEGI_00829 Sequoiadendron giganteum HOM05D006149 ORTHO05D007341 1.8e-27 126.7 111 66.7
Pp3c2_21780 Physcomitrium patens HOM05D006149 ORTHO05D007341 1.1e-26 124.0 100 70.0
SMO364G0740 Selaginella moellendorffii HOM05D006149 ORTHO05D007341 1.9e-26 123.2 92 71.7
DCAR_001643 Daucus carota HOM05D006149 ORTHO05D007341 2.5e-26 122.9 101 66.3
HanXRQChr02g0033021 Helianthus annuus HOM05D006149 ORTHO05D007341 1.6e-25 120.2 117 62.4
AagrBONN_evm.TU.Sc2ySwM_228.2976 Anthoceros agrestis HOM05D006149 ORTHO05D007341 2.1e-25 119.8 79 77.2
vmacro02004 Vaccinium macrocarpon HOM05D006149 ORTHO05D007341 8.1e-25 117.9 143 52.4
Pp3c1_15220 Physcomitrium patens HOM05D006149 ORTHO05D007341 1.2e-23 114.0 91 71.4
Ciclev10006213m.g Citrus clementina HOM05D006149 ORTHO05D007341 3.4e-23 112.5 111 58.6
EL10Ac9g22279 Beta vulgaris HOM05D006149 ORTHO05D007341 1.7e-22 110.2 133 50.4
CBR_g44544 Chara braunii HOM05D006149 ORTHO05D007341 1.7e-22 110.2 97 66.0
Haze_10168 Corylus avellana HOM05D006149 ORTHO05D007341 4.9e-22 108.6 253 36.4
Mapoly0056s0071 Marchantia polymorpha HOM05D006149 ORTHO05D007341 8.4e-22 107.8 113 56.6
CSS0028016 Camellia sinensis var. sinensis HOM05D006149 ORTHO05D007341 1.8e-19 100.1 89 64.0
PGR042G0697 Punica granatum HOM05D006149 ORTHO05D007341 6.7e-19 98.2 73 72.6
Actinidia05494 Actinidia chinensis HOM05D006149 ORTHO05D007341 1.5e-18 97.1 90 62.2
TAR376G0787 Trochodendron aralioides HOM05D006149 ORTHO05D007341 1.1e-13 80.9 78 60.3
MBI12_g27878_MAGBIO Magnolia biondii HOM05D006149 ORTHO05D007341 4.6e-12 75.5 94 54.3
Cre03.g193150 Chlamydomonas reinhardtii HOM05D006149 ORTHO05D007341 6.1e-12 75.1 75 54.7
QL11p033903 Quercus lobata HOM05D006149 ORTHO05D007341 1.1e-10 70.9 40 92.5
SMO197G0096 Selaginella moellendorffii HOM05D024641 ORTHO05D007341 1.5e-10 70.5 52 71.2
Ah.01g018230 Amaranthus hybridus HOM05D006149 ORTHO05D007341 1.6e-09 67.0 132 38.6
MCO08G345 Micromonas commoda HOM05D006149 ORTHO05D007341 4.5e-07 58.9 67 46.3
Thecc.04G122800 Theobroma cacao HOM05D006149 ORTHO05D007341 3.8e-06 55.8 37 70.3


User provided reference genes

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