Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.10G075803 Manihot esculenta HOM05D004473 ORTHO05D005652 5.8e-28 126.7 59 100.0
Potri.013G138201 Populus trichocarpa HOM05D004473 ORTHO05D005652 1.8e-16 88.6 54 75.9
Hma1.2p1_4210F.1_g338470 Hydrangea macrophylla HOM05D004473 ORTHO05D005652 2.2e-14 81.6 58 70.7
RcHm_v2.0_CPg0502521 Rosa chinensis HOM05D004473 ORTHO05D005652 6.3e-14 80.1 52 71.2
ScUNg0001290 Simmondsia chinensis HOM05D004473 ORTHO05D005652 8.2e-14 79.7 52 73.1
SalBow1G8010 Salvia bowleyana HOM05D004473 ORTHO05D005652 1.4e-13 79.0 54 68.5
PGR111G0117 Punica granatum HOM05D004473 ORTHO05D005652 1.8e-13 78.6 52 71.2
MD15G1438900 Malus domestica HOM05D004473 ORTHO05D005652 3.1e-13 77.8 52 71.2
Peaxi162Scf00219g00049 Petunia axillaris HOM05D004473 ORTHO05D005652 6.9e-13 76.6 54 64.8
Eucgr.D01147 Eucalyptus grandis HOM05D004473 ORTHO05D005652 1.2e-12 75.9 52 65.4
LjContig00318g0021272 Lotus japonicus HOM05D004473 ORTHO05D005652 1.2e-12 75.9 52 67.3
Nn1g08463 Nelumbo nucifera HOM05D004473 ORTHO05D005652 1.5e-12 75.5 57 61.4
LjContig00489g0020099 Lotus japonicus HOM05D004473 ORTHO05D005652 2.0e-12 75.1 54 64.8
Sed0024057 Sechium edule HOM05D004473 ORTHO05D005652 1.0e-11 72.8 52 63.5
CAN.G939.10 Capsicum annuum HOM05D004473 ORTHO05D005652 1.3e-11 72.4 56 64.3
MELO3C000879.2 Cucumis melo HOM05D004473 ORTHO05D005652 2.9e-11 71.2 50 66.0
MELO3C027497.2 Cucumis melo HOM05D004473 ORTHO05D005652 2.9e-11 71.2 50 66.0
PSO548G0076 Papaver somniferum HOM05D004473 ORTHO05D005652 3.8e-11 70.9 57 59.6
HanXRQChr00c0125g0571751 Helianthus annuus HOM05D004473 ORTHO05D005652 6.5e-11 70.1 54 68.5
HanXRQChr00c0165g0572171 Helianthus annuus HOM05D004473 ORTHO05D005652 6.5e-11 70.1 54 68.5
HanXRQChr00c0368g0574161 Helianthus annuus HOM05D004473 ORTHO05D005652 6.5e-11 70.1 54 68.5
HanXRQChr11g0326581 Helianthus annuus HOM05D004473 ORTHO05D005652 6.5e-11 70.1 54 68.5
HanXRQChr16g0503961 Helianthus annuus HOM05D004473 ORTHO05D005652 6.5e-11 70.1 54 68.5
HanXRQCPg0579741 Helianthus annuus HOM05D004473 ORTHO05D005652 6.5e-11 70.1 54 68.5
Hund10282 Selenicereus undatus HOM05D004473 ORTHO05D005652 1.1e-10 69.3 54 63.0
Hund27810 Selenicereus undatus HOM05D004473 ORTHO05D005652 1.1e-10 69.3 54 63.0
Hund28272 Selenicereus undatus HOM05D004473 ORTHO05D005652 1.1e-10 69.3 54 63.0
Hund29000 Selenicereus undatus HOM05D004473 ORTHO05D005652 1.1e-10 69.3 54 63.0
Hund29400 Selenicereus undatus HOM05D004473 ORTHO05D005652 1.1e-10 69.3 54 63.0
Hund29405 Selenicereus undatus HOM05D004473 ORTHO05D005652 1.1e-10 69.3 54 63.0
Hund29659 Selenicereus undatus HOM05D004473 ORTHO05D005652 1.1e-10 69.3 54 63.0
Hund29926 Selenicereus undatus HOM05D004473 ORTHO05D005652 1.1e-10 69.3 54 63.0
Hund30056 Selenicereus undatus HOM05D004473 ORTHO05D005652 1.1e-10 69.3 54 63.0
Hund30352 Selenicereus undatus HOM05D004473 ORTHO05D005652 1.1e-10 69.3 54 63.0
DCAR_032465 Daucus carota HOM05D004473 ORTHO05D005652 2.5e-10 68.2 56 64.3
Atru.chr6.757 Acer truncatum HOM05D004473 ORTHO05D005652 3.2e-10 67.8 53 66.0
Solyc00g500048.1 Solanum lycopersicum HOM05D004473 ORTHO05D005652 5.5e-10 67.0 60 61.7
Solyc00g500131.1 Solanum lycopersicum HOM05D004473 ORTHO05D005652 5.5e-10 67.0 60 61.7
Solyc00g500201.1 Solanum lycopersicum HOM05D004473 ORTHO05D005652 5.5e-10 67.0 60 61.7
Solyc00g500295.1 Solanum lycopersicum HOM05D004473 ORTHO05D005652 5.5e-10 67.0 60 61.7
Solyc00g500330.1 Solanum lycopersicum HOM05D004473 ORTHO05D005652 5.5e-10 67.0 60 61.7
Sopen01g008040 Solanum pennellii HOM05D004473 ORTHO05D005652 5.5e-10 67.0 60 61.7
SGA_v2.0_scaffold479G52250 Striga asiatica HOM05D004473 ORTHO05D005652 5.5e-10 67.0 54 55.6
arahy.Tifrunner.gnm1.ann1.40BINF Arachis hypogaea HOM05D004473 ORTHO05D005652 7.2e-10 66.6 56 60.7
Medtr7g021760 Medicago truncatula HOM05D004473 ORTHO05D005652 9.4e-10 66.2 52 61.5
Gohir.A04G039120 Gossypium hirsutum HOM05D004473 ORTHO05D005652 1.2e-09 65.9 53 62.3
Gohir.A04G039150 Gossypium hirsutum HOM05D004473 ORTHO05D005652 1.2e-09 65.9 53 62.3
Lj2P1239T154 Lonicera japonica HOM05D004473 ORTHO05D005652 1.2e-09 65.9 58 58.6
Medtr3g035685 Medicago truncatula HOM05D004473 ORTHO05D005652 1.2e-09 65.9 52 59.6
Medtr4g051280 Medicago truncatula HOM05D004473 ORTHO05D005652 1.2e-09 65.9 52 59.6
Medtr7g117940 Medicago truncatula HOM05D004473 ORTHO05D005652 1.2e-09 65.9 52 59.6
Hund10683 Selenicereus undatus HOM05D004473 ORTHO05D005652 1.2e-09 65.9 54 61.1
Hund11181 Selenicereus undatus HOM05D004473 ORTHO05D005652 1.2e-09 65.9 52 63.5
EL10As2g23210 Beta vulgaris HOM05D004473 ORTHO05D005652 1.6e-09 65.5 52 63.5
Gohir.1Z049403 Gossypium hirsutum HOM05D004473 ORTHO05D005652 3.6e-09 64.3 51 62.7
Lalb_Chr13g0292931 Lupinus albus HOM05D004473 ORTHO05D005652 8.8e-08 59.7 52 53.8
Lalb_Chr07g0191541 Lupinus albus HOM05D004473 ORTHO05D005652 1.1e-07 59.3 52 55.8
Psat0s1330g0240 Pisum sativum HOM05D004473 ORTHO05D005652 1.1e-07 59.3 56 53.6
BcaC05g28805 Brassica carinata HOM05D004473 ORTHO05D005652 4.8e-06 53.9 57 49.1
Gohir.1Z050066 Gossypium hirsutum HOM05D004473 ORTHO05D005652 4.8e-06 53.9 43 60.5


User provided reference genes

Program Settings