Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.10G064901 Manihot esculenta HOM05D006789 ORTHO05D008460 1.6e-99 366.3 210 100.0
Gorai.N006500 Gossypium raimondii HOM05D006789 ORTHO05D008460 1.4e-79 300.1 207 75.4
Dinv24597 Davidia involucrata HOM05D006789 ORTHO05D008460 1.8e-79 299.7 207 77.3
Gohir.A06G170900 Gossypium hirsutum HOM05D006789 ORTHO05D008460 2.3e-79 299.3 207 75.4
Atru.chr3.2036 Acer truncatum HOM05D006789 ORTHO05D008460 3.1e-79 298.9 204 76.5
Ciclev10029282m.g Citrus clementina HOM05D006789 ORTHO05D008460 4.0e-79 298.5 209 76.1
Gohir.D06G178700 Gossypium hirsutum HOM05D006789 ORTHO05D008460 5.2e-79 298.1 207 74.9
Duzib106G0468 Durio zibethinus HOM05D006789 ORTHO05D008460 6.8e-79 297.7 205 77.6
Potri.008G012100 Populus trichocarpa HOM05D006789 ORTHO05D008460 4.9e-77 291.6 210 77.1
TWI38G1707 Tripterygium wilfordii HOM05D006789 ORTHO05D008460 1.4e-76 290.0 211 73.5
Thecc.10G129500 Theobroma cacao HOM05D006789 ORTHO05D008460 3.2e-76 288.9 218 72.9
Haze_03403 Corylus avellana HOM05D006789 ORTHO05D008460 5.4e-76 288.1 234 69.2
PGR044G1098 Punica granatum HOM05D006789 ORTHO05D008460 7.1e-76 287.7 211 73.9
Sabra08G0007400 Salix brachista HOM05D006789 ORTHO05D008460 2.1e-75 286.2 212 78.8
Hma1.2p1_0892F.1_g233210 Hydrangea macrophylla HOM05D006789 ORTHO05D008460 4.6e-75 285.0 207 73.4
arahy.Tifrunner.gnm1.ann1.G6AZCI Arachis hypogaea HOM05D006789 ORTHO05D008460 7.8e-75 284.3 168 84.5
arahy.Tifrunner.gnm1.ann1.KMQ9TB Arachis hypogaea HOM05D006789 ORTHO05D008460 7.8e-75 284.3 168 84.5
CiPaw.14G037500 Carya illinoinensis HOM05D006789 ORTHO05D008460 7.8e-75 284.3 207 73.4
TAR633G0905 Trochodendron aralioides HOM05D006789 ORTHO05D008460 1.0e-74 283.9 168 85.7
Lalb_Chr15g0079361 Lupinus albus HOM05D006789 ORTHO05D008460 1.7e-74 283.1 207 73.9
Prupe.2G061000 Prunus persica HOM05D006789 ORTHO05D008460 2.3e-74 282.7 214 73.8
Glyma.06G315000 Glycine max HOM05D006789 ORTHO05D008460 5.6e-73 278.1 168 85.1
MBI19_g19122_MAGBIO Magnolia biondii HOM05D006789 ORTHO05D008460 2.8e-72 275.8 168 82.7
Glyma.04G129000 Glycine max HOM05D006789 ORTHO05D008460 6.2e-72 274.6 206 71.4
COL.COLO4_28906 Corchorus olitorius HOM05D006789 ORTHO05D008460 1.1e-71 273.9 159 88.1
Rhsim07G0072100 Rhododendron simsii HOM05D006789 ORTHO05D008460 1.8e-71 273.1 221 67.4
Medtr3g006790 Medicago truncatula HOM05D006789 ORTHO05D008460 2.3e-71 272.7 168 82.7
TPR.G25521 Trifolium pratense HOM05D006789 ORTHO05D008460 2.3e-71 272.7 168 83.9
Gorai.010G208300 Gossypium raimondii HOM05D006789 ORTHO05D008460 5.2e-71 271.6 159 87.4
GSVIVG01027313001 Vitis vinifera HOM05D006789 ORTHO05D008460 5.2e-71 271.6 168 82.1
Gorai.N006000 Gossypium raimondii HOM05D006789 ORTHO05D008460 8.9e-71 270.8 156 88.5
Lj3g0008710 Lotus japonicus HOM05D006789 ORTHO05D008460 8.9e-71 270.8 168 82.7
MD02G1265000 Malus domestica HOM05D006789 ORTHO05D008460 8.9e-71 270.8 215 69.3
vmacro13786 Vaccinium macrocarpon HOM05D006789 ORTHO05D008460 1.5e-70 270.0 229 65.1
MELO3C012309.2 Cucumis melo HOM05D006789 ORTHO05D008460 2.6e-70 269.2 207 68.6
Actinidia19614 Actinidia chinensis HOM05D000583 ORTHO05D000442 3.4e-70 268.9 168 83.3
BcaC06g32200 Brassica carinata HOM05D006789 ORTHO05D008460 3.4e-70 268.9 216 64.4
CsaV3_5G034990 Cucumis sativus L. HOM05D006789 ORTHO05D008460 3.4e-70 268.9 207 68.6
ClCG05G022140 Citrullus lanatus HOM05D006789 ORTHO05D008460 5.8e-70 268.1 209 70.3
CANSAT56G4131 Cannabis sativa HOM05D006789 ORTHO05D008460 7.5e-70 267.7 211 67.8
Eucgr.J00312 Eucalyptus grandis HOM05D006789 ORTHO05D008460 1.3e-69 266.9 199 69.8
THA.LOC104826955 Tarenaya hassleriana HOM05D006789 ORTHO05D008460 2.9e-69 265.8 168 78.6
DCAR_006626 Daucus carota HOM05D006789 ORTHO05D008460 3.7e-69 265.4 167 79.6
Thhalv10014633m.g Eutrema salsugineum HOM05D006789 ORTHO05D008460 3.7e-69 265.4 168 78.6
BraA10t45166Z Brassica rapa HOM05D006789 ORTHO05D008460 1.1e-68 263.8 217 65.4
Carub.0006s0385 Capsella rubella HOM05D006789 ORTHO05D008460 1.4e-68 263.5 168 78.0
A10p31220 Brassica napus HOM05D006789 ORTHO05D008460 2.4e-68 262.7 217 65.0
BolC9t59933H Brassica oleracea HOM05D006789 ORTHO05D008460 2.4e-68 262.7 217 65.4
Peaxi162Scf00217g00626 Petunia axillaris HOM05D006789 ORTHO05D008460 2.4e-68 262.7 206 68.0
AL6G14600 Arabidopsis lyrata HOM05D006789 ORTHO05D008460 3.2e-68 262.3 165 78.2
Sp6g37890 Schrenkiella parvula HOM05D006789 ORTHO05D008460 3.2e-68 262.3 168 76.8
AT5G04910 Arabidopsis thaliana HOM05D006789 ORTHO05D008460 4.1e-68 261.9 168 76.8
VMungo0647G0732 Vigna mungo HOM05D006789 ORTHO05D008460 5.4e-68 261.5 206 68.0
Oeu013184.1 Olea europaea HOM05D006789 ORTHO05D008460 7.1e-68 261.2 215 65.1
C09p71840 Brassica napus HOM05D006789 ORTHO05D008460 9.2e-68 260.8 217 65.0
Lsat_1_v5_gn_2_28141 Lactuca sativa HOM05D006789 ORTHO05D008460 1.6e-67 260.0 207 67.6
Phvul.008G161900 Phaseolus vulgaris HOM05D006789 ORTHO05D008460 2.1e-67 259.6 204 67.6
SGA_v2.0_scaffold196G40989 Striga asiatica HOM05D006789 ORTHO05D008460 2.1e-67 259.6 168 76.8
MSTRG.5084 Avicennia marina HOM05D006789 ORTHO05D008460 4.6e-67 258.5 216 64.8
Gohir.A06G170906 Gossypium hirsutum HOM05D006789 ORTHO05D008460 1.0e-66 257.3 154 85.7
SalBow4G0168 Salvia bowleyana HOM05D006789 ORTHO05D008460 1.0e-66 257.3 221 62.9
CSS0000309 Camellia sinensis var. sinensis HOM05D006789 ORTHO05D008460 1.3e-66 256.9 153 85.0
Aqoxy1G00021 Aquilegia oxysepala HOM05D006789 ORTHO05D008460 1.7e-66 256.5 168 76.8
Hund00694 Selenicereus undatus HOM05D006789 ORTHO05D008460 2.3e-66 256.1 178 73.6
SGA_v2.0_scaffold196G40996 Striga asiatica HOM05D006789 ORTHO05D008460 3.0e-66 255.8 168 76.2
Solyc10g039380.2 Solanum lycopersicum HOM05D006789 ORTHO05D008460 3.9e-66 255.4 166 78.3
RcHm_v2.0_Chr1g0331321 Rosa chinensis HOM05D006789 ORTHO05D008460 6.6e-66 254.6 172 76.7
Sopen10g012840 Solanum pennellii HOM05D006789 ORTHO05D008460 8.6e-66 254.2 166 77.7
Sed0016797 Sechium edule HOM05D006789 ORTHO05D008460 1.1e-65 253.8 207 66.2
Hma1.2p1_0892F.1_g233220 Hydrangea macrophylla HOM05D006789 ORTHO05D008460 1.5e-65 253.4 150 85.3
EL10Ac4g08777 Beta vulgaris HOM05D006789 ORTHO05D008460 1.9e-65 253.1 207 64.3
HanXRQChr06g0181521 Helianthus annuus HOM05D006789 ORTHO05D008460 1.6e-64 250.0 207 65.7
Gohir.D06G178832 Gossypium hirsutum HOM05D006789 ORTHO05D008460 3.6e-64 248.8 149 85.2
Nn2g14746 Nelumbo nucifera HOM05D006789 ORTHO05D008460 8.1e-64 247.7 167 76.0
Nitab4.5_0004033g0070 Nicotiana tabacum HOM05D006789 ORTHO05D008460 4.0e-63 245.4 155 79.4
ECA238G4254 Erigeron canadensis HOM05D006789 ORTHO05D008460 6.8e-63 244.6 208 65.4
FvH4_7g05010 Fragaria vesca HOM05D006789 ORTHO05D008460 2.0e-62 243.0 210 63.8
Sc22g0002280 Simmondsia chinensis HOM05D006789 ORTHO05D001455 3.4e-62 242.3 199 65.3
Aa31LG11G5790 Aethionema arabicum HOM05D006789 ORTHO05D008460 7.6e-62 241.1 165 73.3
FAN06G2149 Fragaria x ananassa HOM05D006789 ORTHO05D008460 9.9e-62 240.7 216 62.0
PSO339G2606 Papaver somniferum HOM05D006789 ORTHO05D008460 2.9e-61 239.2 202 61.4
Lj7C491T7 Lonicera japonica HOM05D006789 ORTHO05D008460 1.4e-60 236.9 152 82.2
Nitab4.5_0002156g0010 Nicotiana tabacum HOM05D006789 ORTHO05D008460 1.9e-60 236.5 155 76.8
PSO384G0303 Papaver somniferum HOM05D006789 ORTHO05D008460 2.4e-60 236.1 202 59.9
Cc02_g32010 Coffea canephora HOM05D006789 ORTHO05D008460 4.2e-60 235.3 158 75.3
Os01g0265700 Oryza sativa ssp. japonica HOM05D006789 ORTHO05D008460 4.2e-60 235.3 167 71.9
Zm00001eb128210 Zea mays HOM05D006789 ORTHO05D008460 3.5e-59 232.3 167 71.9
CDE08G0307 Ceratophyllum demersum HOM05D006789 ORTHO05D008460 7.8e-59 231.1 167 71.9
MBI06_g23363_MAGBIO Magnolia biondii HOM05D006789 ORTHO05D008460 3.9e-58 228.8 150 76.7
Carub.0010s0003 Capsella rubella HOM05D006789 ORTHO05D008460 1.1e-57 227.3 166 69.3
ATR0068G087 Amborella trichopoda HOM05D006789 ORTHO05D008460 1.9e-57 226.5 151 75.5
Sed0010043 Sechium edule HOM05D006789 ORTHO05D008460 6.2e-56 221.5 207 60.9
FAN03G1759 Fragaria x ananassa HOM05D006789 ORTHO05D008460 4.0e-55 218.8 175 69.7
Migut.N01877 Erythranthe guttata HOM05D006789 ORTHO05D008460 2.6e-54 216.1 213 57.7
SEGI_32817 Sequoiadendron giganteum HOM05D006789 ORTHO05D008460 5.4e-52 208.4 155 66.5
MBI05_g14944_MAGBIO Magnolia biondii HOM05D006789 ORTHO05D008460 1.6e-48 196.8 132 74.2
FAN01G0280 Fragaria x ananassa HOM05D006789 ORTHO05D008460 6.2e-48 194.9 171 64.9
Psat5g230200 Pisum sativum HOM05D006789 ORTHO05D008460 8.1e-48 194.5 122 84.4
unitig_26.g9495 Utricularia gibba HOM05D006789 ORTHO05D008460 2.6e-46 189.5 167 58.1
AUR62014306 Chenopodium quinoa HOM05D006789 ORTHO05D008460 4.6e-43 178.7 167 59.3
Gorai.010G208600 Gossypium raimondii HOM05D006789 ORTHO05D008460 1.1e-39 167.5 146 67.1
Actinidia29655 Actinidia chinensis HOM05D006789 ORTHO05D008460 1.9e-36 156.8 199 51.3
Pp3c10_8520 Physcomitrium patens HOM05D006789 ORTHO05D008460 2.7e-35 152.9 161 49.1
CARHR208350 Cardamine hirsuta HOM05D006789 ORTHO05D008460 7.9e-35 151.4 90 81.1
Cfa010449 Carpinus fangiana HOM05D006789 ORTHO05D008460 5.1e-34 148.7 124 65.3
TAR633G1630 Trochodendron aralioides HOM05D006789 ORTHO05D008460 8.2e-32 141.4 86 83.7
TAR629G1007 Trochodendron aralioides HOM05D001508 ORTHO05D008460 1.1e-31 141.0 79 89.9
SMO364G0543 Selaginella moellendorffii HOM05D006789 ORTHO05D008460 4.1e-31 139.0 173 48.6
Mapoly0023s0087 Marchantia polymorpha HOM05D006789 ORTHO05D008460 1.5e-30 137.1 165 46.7
Ca_14025_v3 Cicer arietinum L. HOM05D006789 ORTHO05D008460 7.1e-28 128.3 78 80.8
Cfa005731 Carpinus fangiana HOM05D012552 ORTHO05D018926 5.1e-26 122.1 82 75.6
SMO353G0288 Selaginella moellendorffii HOM05D006789 ORTHO05D008460 1.3e-24 117.5 165 46.1
Cfa006091 Carpinus fangiana HOM05D006789 ORTHO05D008460 2.2e-24 116.7 84 75.0
TAR636G3403 Trochodendron aralioides HOM05D006789 ORTHO05D008460 2.2e-24 116.7 72 83.3
BcaB03g15210 Brassica carinata HOM05D006789 ORTHO05D008460 4.5e-22 109.0 65 78.5
CBR_g54451 Chara braunii HOM05D003248 ORTHO05D000301 2.7e-19 99.8 240 31.2
AUR62034099 Chenopodium quinoa HOM05D006789 ORTHO05D008460 3.3e-17 92.8 61 73.8
Phvul.005G010900 Phaseolus vulgaris HOM05D006789 ORTHO05D008460 5.7e-17 92.0 90 60.0
Cfa010304 Carpinus fangiana HOM05D012552 ORTHO05D018926 1.3e-16 90.9 85 64.7
SHI05402 Sapria himalayana HOM05D005149 ORTHO05D006251 9.4e-12 74.7 71 53.5
SHI21242 Sapria himalayana HOM05D006789 ORTHO05D008460 2.6e-09 66.6 53 64.2
Cre16.g683483 Chlamydomonas reinhardtii HOM05D006789 ORTHO05D008460 6.3e-08 62.0 86 39.5


User provided reference genes

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