Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.10G062200 Manihot esculenta HOM05D006196 ORTHO05D007758 8.3e-185 650.2 322 100.0
Manes.07G086900 Manihot esculenta HOM05D006196 ORTHO05D007758 1.2e-159 566.6 325 85.2
Potri.008G019700 Populus trichocarpa HOM05D006196 ORTHO05D007758 1.1e-125 453.8 320 70.6
Sabra08G0013000 Salix brachista HOM05D006196 ORTHO05D007758 3.1e-123 445.7 318 70.4
Potri.010G239700 Populus trichocarpa HOM05D006196 ORTHO05D007758 5.8e-122 441.4 322 68.6
Sabra10G0187700 Salix brachista HOM05D006196 ORTHO05D007758 1.7e-121 439.9 322 68.3
CSS0023098 Camellia sinensis var. sinensis HOM05D006196 ORTHO05D007758 1.0e-118 430.6 327 65.4
Lj2C33T17 Lonicera japonica HOM05D006196 ORTHO05D007758 2.4e-115 419.5 332 63.9
TAR623G1022 Trochodendron aralioides HOM05D006196 ORTHO05D007758 1.1e-112 410.6 322 64.6
Haze_03294 Corylus avellana HOM05D006196 ORTHO05D007758 1.6e-111 406.8 322 63.4
Atru.chr12.1044 Acer truncatum HOM05D006196 ORTHO05D007758 2.1e-111 406.4 327 63.0
Nitab4.5_0002586g0080 Nicotiana tabacum HOM05D006196 ORTHO05D007758 2.1e-111 406.4 326 62.6
Nitab4.5_0003590g0020 Nicotiana tabacum HOM05D006196 ORTHO05D007758 2.1e-111 406.4 326 62.9
Cpa.g.sc56.1 Carica papaya HOM05D006196 ORTHO05D007758 3.6e-111 405.6 335 61.2
Duzib114G0383 Durio zibethinus HOM05D006196 ORTHO05D007758 4.6e-111 405.2 328 61.9
Thecc.10G115000 Theobroma cacao HOM05D006196 ORTHO05D007758 4.6e-111 405.2 335 61.5
PGSC0003DMG400023969 Solanum tuberosum HOM05D006196 ORTHO05D007758 1.4e-110 403.7 323 61.9
Actinidia18628 Actinidia chinensis HOM05D006196 ORTHO05D007758 5.7e-109 398.3 322 62.7
COL.COLO4_29746 Corchorus olitorius HOM05D006196 ORTHO05D007758 7.4e-109 397.9 330 59.4
Solyc11g006830.2 Solanum lycopersicum HOM05D006196 ORTHO05D007758 7.4e-109 397.9 318 61.6
Sopen11g002750 Solanum pennellii HOM05D006196 ORTHO05D007758 9.7e-109 397.5 318 61.6
TWI38G1704 Tripterygium wilfordii HOM05D006196 ORTHO05D007758 2.2e-108 396.4 334 60.5
Rhsim03G0097800 Rhododendron simsii HOM05D006196 ORTHO05D007758 1.8e-107 393.3 337 59.3
CiPaw.13G040700 Carya illinoinensis HOM05D006196 ORTHO05D007758 3.1e-107 392.5 328 60.4
QL04p046737 Quercus lobata HOM05D006196 ORTHO05D007758 4.1e-107 392.1 353 58.6
CAN.G645.29 Capsicum annuum HOM05D006196 ORTHO05D007758 4.5e-106 388.7 322 60.2
Hma1.2p1_0457F.1_g156990 Hydrangea macrophylla HOM05D006196 ORTHO05D007758 7.7e-106 387.9 301 62.8
Oeu026604.1 Olea europaea HOM05D006196 ORTHO05D007758 4.2e-104 382.1 326 57.7
Gorai.012G020000 Gossypium raimondii HOM05D006196 ORTHO05D007758 5.1e-102 375.2 322 58.4
Gohir.A05G398600 Gossypium hirsutum HOM05D006196 ORTHO05D007758 2.6e-101 372.9 322 58.1
Gohir.D04G017300 Gossypium hirsutum HOM05D006196 ORTHO05D007758 2.6e-101 372.9 322 58.4
Lj5g0013601 Lotus japonicus HOM05D006196 ORTHO05D007758 3.3e-101 372.5 324 57.4
CANSAT56G0980 Cannabis sativa HOM05D006196 ORTHO05D007758 5.7e-101 371.7 319 58.0
ClCG08G008290 Citrullus lanatus HOM05D006196 ORTHO05D007758 7.4e-101 371.3 322 60.6
Phvul.007G023000 Phaseolus vulgaris HOM05D006196 ORTHO05D007758 1.7e-100 370.2 332 57.8
Glyma.20G111300 Glycine max HOM05D006196 ORTHO05D007758 3.7e-100 369.0 335 56.4
VMungo0720G0291 Vigna mungo HOM05D006196 ORTHO05D007758 3.7e-100 369.0 330 57.9
THA.LOC104811342 Tarenaya hassleriana HOM05D006196 ORTHO05D007758 1.1e-99 367.5 360 51.4
CsaV3_6G004260 Cucumis sativus L. HOM05D006196 ORTHO05D007758 4.1e-99 365.5 323 59.8
Sed0008038 Sechium edule HOM05D006196 ORTHO05D007758 7.0e-99 364.8 333 59.2
MBI01_g16486_MAGBIO Magnolia biondii HOM05D006196 ORTHO05D007758 1.2e-98 364.0 323 57.0
Sed0021157 Sechium edule HOM05D006196 ORTHO05D007758 1.2e-98 364.0 351 55.8
Glyma.10G278400 Glycine max HOM05D006196 ORTHO05D007758 1.6e-98 363.6 331 55.9
MELO3C019897.2 Cucumis melo HOM05D006196 ORTHO05D007758 2.0e-98 363.2 323 59.1
AT3G54290 Arabidopsis thaliana HOM05D006196 ORTHO05D007758 7.7e-98 361.3 347 50.7
Migut.F00871 Erythranthe guttata HOM05D006196 ORTHO05D007758 2.2e-97 359.8 328 54.6
AL5G35330 Arabidopsis lyrata HOM05D006196 ORTHO05D007758 1.5e-96 357.1 350 52.0
Cc02_g09600 Coffea canephora HOM05D006196 ORTHO05D007758 1.9e-96 356.7 331 55.6
GSVIVG01010724001 Vitis vinifera HOM05D006196 ORTHO05D007758 1.9e-96 356.7 259 67.2
Ca_25660_v3 Cicer arietinum L. HOM05D006196 ORTHO05D007758 2.5e-96 356.3 333 54.7
Lalb_Chr06g0166391 Lupinus albus HOM05D006196 ORTHO05D007758 3.2e-96 355.9 333 54.4
MSTRG.9056 Avicennia marina HOM05D006196 ORTHO05D007758 4.2e-96 355.5 330 54.8
BcaC02g09075 Brassica carinata HOM05D006196 ORTHO05D007758 7.2e-96 354.8 323 53.6
Sp5g08100 Schrenkiella parvula HOM05D006196 ORTHO05D007758 7.2e-96 354.8 351 49.3
Lsat_1_v5_gn_2_104380 Lactuca sativa HOM05D006196 ORTHO05D007758 1.2e-95 354.0 304 59.2
Medtr1g111960 Medicago truncatula HOM05D006196 ORTHO05D007758 1.2e-95 354.0 333 54.1
MSTRG.27569 Avicennia marina HOM05D006196 ORTHO05D007758 1.6e-95 353.6 310 56.1
SalBow6G5730 Salvia bowleyana HOM05D006196 ORTHO05D007758 1.6e-95 353.6 329 53.8
BcaB02g08483 Brassica carinata HOM05D006196 ORTHO05D007758 8.0e-95 351.3 324 52.8
TPR.G2427 Trifolium pratense HOM05D006196 ORTHO05D007758 8.0e-95 351.3 334 53.9
Thhalv10010495m.g Eutrema salsugineum HOM05D006196 ORTHO05D007758 1.0e-94 350.9 355 49.3
HanXRQChr11g0342081 Helianthus annuus HOM05D006196 ORTHO05D007758 1.4e-94 350.5 300 59.3
Psat0s1903g0040 Pisum sativum HOM05D006196 ORTHO05D007758 2.3e-94 349.7 334 53.9
CARHR164220 Cardamine hirsuta HOM05D006196 ORTHO05D007758 3.0e-94 349.4 352 50.0
arahy.Tifrunner.gnm1.ann1.EL78PJ Arachis hypogaea HOM05D006196 ORTHO05D007758 4.0e-94 349.0 335 52.5
Carub.0005s2088 Capsella rubella HOM05D006196 ORTHO05D007758 8.8e-94 347.8 347 50.1
arahy.Tifrunner.gnm1.ann1.N25XM0 Arachis hypogaea HOM05D006196 ORTHO05D007758 1.5e-93 347.1 335 52.2
Aa31sc392G30 Aethionema arabicum HOM05D006196 ORTHO05D007758 2.6e-93 346.3 335 50.7
BraA04t16248Z Brassica rapa HOM05D006196 ORTHO05D007758 3.3e-93 345.9 324 53.4
ECA238G1493 Erigeron canadensis HOM05D006196 ORTHO05D007758 1.3e-92 344.0 300 57.3
A04p05460 Brassica napus HOM05D006196 ORTHO05D007758 3.7e-92 342.4 324 52.8
HanXRQChr07g0194291 Helianthus annuus HOM05D006196 ORTHO05D007758 6.3e-92 341.7 300 58.0
Medtr1g050385 Medicago truncatula HOM05D006196 ORTHO05D007758 1.1e-91 340.9 349 52.7
BraA09t40190Z Brassica rapa HOM05D006196 ORTHO05D007758 2.7e-90 336.3 362 47.0
Hund06787 Selenicereus undatus HOM05D006196 ORTHO05D007758 2.7e-90 336.3 351 51.6
SGA_v2.0_scaffold13G06435 Striga asiatica HOM05D006196 ORTHO05D007758 2.7e-90 336.3 375 48.5
BolC8t50558H Brassica oleracea HOM05D006196 ORTHO05D007758 4.5e-90 335.5 360 47.2
C04p38140 Brassica napus HOM05D006196 ORTHO05D007758 5.9e-90 335.1 323 51.4
A09p47290 Brassica napus HOM05D006196 ORTHO05D007758 1.3e-89 334.0 294 53.4
Lj6g0028083 Lotus japonicus HOM05D006196 ORTHO05D007758 1.7e-89 333.6 344 52.3
TPR.G10627 Trifolium pratense HOM05D006196 ORTHO05D007758 5.0e-89 332.0 351 51.9
C08p29520 Brassica napus HOM05D006196 ORTHO05D007758 1.5e-88 330.5 294 52.7
Sc09g0005310 Simmondsia chinensis HOM05D006196 ORTHO05D007758 1.5e-88 330.5 316 53.2
Ah.13g074540 Amaranthus hybridus HOM05D006196 ORTHO05D007758 1.9e-88 330.1 342 50.3
Peaxi162Scf00173g00018 Petunia axillaris HOM05D006196 ORTHO05D007758 5.5e-88 328.6 278 62.2
Dinv10931 Davidia involucrata HOM05D006196 ORTHO05D007758 1.2e-87 327.4 249 65.9
CDE08G0664 Ceratophyllum demersum HOM05D006196 ORTHO05D007758 1.6e-87 327.0 305 52.8
unitig_37.g12349 Utricularia gibba HOM05D006196 ORTHO05D007758 2.7e-87 326.2 329 52.0
PSO801G0620 Papaver somniferum HOM05D006196 ORTHO05D007758 1.8e-86 323.6 328 51.5
DCAR_019003 Daucus carota HOM05D006196 ORTHO05D007758 3.0e-86 322.8 334 51.5
PSO339G1429 Papaver somniferum HOM05D006196 ORTHO05D007758 3.0e-86 322.8 331 51.4
Psat6g093840 Pisum sativum HOM05D006196 ORTHO05D007758 4.4e-85 318.9 341 51.6
Ah.06g186650 Amaranthus hybridus HOM05D006196 ORTHO05D007758 9.8e-85 317.8 337 50.4
Prupe.2G067800 Prunus persica HOM05D006196 ORTHO05D007758 2.2e-84 316.6 348 51.1
Glyma.10G111100 Glycine max HOM05D006196 ORTHO05D007758 2.8e-84 316.2 349 49.9
Lalb_Chr01g0010431 Lupinus albus HOM05D006196 ORTHO05D007758 1.9e-80 303.5 377 46.2
MD07G1059000 Malus domestica HOM05D006196 ORTHO05D007758 2.5e-80 303.1 355 48.7
MD07G1059300 Malus domestica HOM05D006196 ORTHO05D007758 4.7e-79 298.9 361 47.4
Ciclev10015947m.g Citrus clementina HOM05D006196 ORTHO05D007758 3.1e-75 286.2 329 48.9
BcaB01g00209 Brassica carinata HOM05D006196 ORTHO05D007758 1.8e-67 260.4 360 40.8
ATR0820G221 Amborella trichopoda HOM05D006196 ORTHO05D007758 6.2e-63 245.4 216 53.2
BolC4t25389H Brassica oleracea HOM05D006196 ORTHO05D007758 1.6e-58 230.7 203 54.2
HPP92_026086 Vanilla planifolia HOM05D006196 ORTHO05D007758 8.3e-52 208.4 336 39.9
unitig_46.g18638 Utricularia gibba HOM05D006196 ORTHO05D007758 4.6e-50 202.6 179 56.4
HPP92_025137 Vanilla planifolia HOM05D006196 ORTHO05D007758 1.1e-48 198.0 336 39.0
SMO146G0289 Selaginella moellendorffii HOM05D006196 ORTHO05D007758 3.6e-47 193.0 243 40.3
Os01g0861700 Oryza sativa ssp. japonica HOM05D006196 ORTHO05D007758 1.1e-43 181.4 318 37.1
Zm00001eb147080 Zea mays HOM05D006196 ORTHO05D007758 4.6e-42 176.0 321 35.2
Ca_20266_v3 Cicer arietinum L. HOM05D006196 ORTHO05D007758 1.7e-41 174.1 210 46.2
Mapoly0016s0155 Marchantia polymorpha HOM05D006196 ORTHO05D007758 2.0e-37 160.6 285 33.3
Pp3c13_16840 Physcomitrium patens HOM05D006196 ORTHO05D007758 1.7e-36 157.5 216 40.3
Pp3c12_15440 Physcomitrium patens HOM05D006196 ORTHO05D007758 1.0e-33 148.3 199 38.2
AagrBONN_evm.TU.Sc2ySwM_228.4853 Anthoceros agrestis HOM05D006196 ORTHO05D007758 1.3e-33 147.9 223 39.9
Pp3c3_21020 Physcomitrium patens HOM05D006196 ORTHO05D007758 1.5e-32 144.4 199 38.7
Pp3c16_23090 Physcomitrium patens HOM05D006196 ORTHO05D007758 4.3e-32 142.9 207 36.2
Pp3c16_23080 Physcomitrium patens HOM05D006196 ORTHO05D007758 1.6e-31 141.0 198 37.9
Pp3c25_11830 Physcomitrium patens HOM05D006196 ORTHO05D007758 3.6e-31 139.8 198 37.4
Pp3c6_4750 Physcomitrium patens HOM05D006196 ORTHO05D007758 1.1e-30 138.3 233 32.6
SMO198G0051 Selaginella moellendorffii HOM05D006196 ORTHO05D007758 2.4e-30 137.1 226 35.4
arahy.Tifrunner.gnm1.ann1.5GK804 Arachis hypogaea HOM05D006196 ORTHO05D007758 1.0e-25 121.7 121 50.4
Pp3c25_11860 Physcomitrium patens HOM05D006196 ORTHO05D007758 2.3e-25 120.6 150 40.0
Actinidia02755 Actinidia chinensis HOM05D006196 ORTHO05D007758 4.0e-22 109.8 85 62.4
arahy.Tifrunner.gnm1.ann1.K1D1LI Arachis hypogaea HOM05D006196 ORTHO05D007758 4.0e-22 109.8 115 49.6
CBR_g31351 Chara braunii HOM05D006196 ORTHO05D007758 2.6e-21 107.1 164 34.1
Zm00001eb366830 Zea mays HOM05D006196 ORTHO05D007758 3.3e-16 90.1 129 40.3
unitig_46.g18639 Utricularia gibba HOM05D006196 ORTHO05D007758 8.1e-15 85.5 94 47.9


User provided reference genes

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