Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.10G061700 Manihot esculenta HOM05D006058 ORTHO05D007686 1.3e-69 266.2 127 100.0
Manes.07G087200 Manihot esculenta HOM05D006058 ORTHO05D007686 9.6e-52 206.8 132 78.0
Hma1.2p1_1049F.1_g251900 Hydrangea macrophylla HOM05D006058 ORTHO05D007686 4.2e-47 191.4 128 72.7
RcHm_v2.0_Chr6g0292311 Rosa chinensis HOM05D006058 ORTHO05D007686 4.2e-47 191.4 128 71.1
Hma1.2p1_0399F.1_g144340 Hydrangea macrophylla HOM05D006058 ORTHO05D007686 1.6e-46 189.5 128 72.7
Oeu032852.1 Olea europaea HOM05D006058 ORTHO05D007686 2.7e-46 188.7 130 70.8
Potri.014G083500 Populus trichocarpa HOM05D006058 ORTHO05D007686 3.5e-46 188.3 131 68.7
CSS0022820 Camellia sinensis var. sinensis HOM05D006058 ORTHO05D007686 4.6e-46 188.0 130 70.8
Psat4g228760 Pisum sativum HOM05D006058 ORTHO05D007686 1.7e-45 186.0 130 66.2
vmacro02518 Vaccinium macrocarpon HOM05D006058 ORTHO05D007686 2.3e-45 185.7 130 71.5
Sc26g0003460 Simmondsia chinensis HOM05D006058 ORTHO05D007686 3.0e-45 185.3 130 69.2
PGR119G2453 Punica granatum HOM05D006058 ORTHO05D007686 5.1e-45 184.5 129 69.8
FvH4_2g24470 Fragaria vesca HOM05D006058 ORTHO05D007686 6.6e-45 184.1 128 68.8
FAN24G0575 Fragaria x ananassa HOM05D006058 ORTHO05D007686 6.6e-45 184.1 128 68.8
FAN27G3183 Fragaria x ananassa HOM05D006058 ORTHO05D007686 6.6e-45 184.1 128 68.8
Eucgr.H01614 Eucalyptus grandis HOM05D006058 ORTHO05D007686 1.5e-44 183.0 128 68.8
GSVIVG01011025001 Vitis vinifera HOM05D006058 ORTHO05D007686 2.5e-44 182.2 128 68.0
Sabra02G0198900 Salix brachista HOM05D006058 ORTHO05D007686 7.3e-44 180.6 131 67.9
TAR636G0052 Trochodendron aralioides HOM05D006058 ORTHO05D007686 9.6e-44 180.3 127 70.1
Lalb_Chr07g0187491 Lupinus albus HOM05D006058 ORTHO05D007686 1.3e-43 179.9 130 67.7
SGA_v2.0_scaffold130G34295 Striga asiatica HOM05D006058 ORTHO05D007686 1.3e-43 179.9 127 68.5
CANSAT25G3509 Cannabis sativa HOM05D006058 ORTHO05D007686 2.1e-43 179.1 128 66.4
TWI23G1093 Tripterygium wilfordii HOM05D006058 ORTHO05D007686 2.8e-43 178.7 128 70.3
Ca_03230_v3 Cicer arietinum L. HOM05D006058 ORTHO05D007686 4.8e-43 177.9 127 66.9
Prupe.8G268000 Prunus persica HOM05D006058 ORTHO05D007686 4.8e-43 177.9 131 67.2
MD04G1200100 Malus domestica HOM05D006058 ORTHO05D007686 6.2e-43 177.6 134 66.4
Nn4g26080 Nelumbo nucifera HOM05D006058 ORTHO05D007686 8.1e-43 177.2 130 65.4
Duzib211G0114 Durio zibethinus HOM05D006058 ORTHO05D007686 1.1e-42 176.8 128 67.2
Lj2g0026207 Lotus japonicus HOM05D006058 ORTHO05D007686 1.1e-42 176.8 128 65.6
vmacro04594 Vaccinium macrocarpon HOM05D006058 ORTHO05D007686 1.1e-42 176.8 124 71.8
DCAR_018372 Daucus carota HOM05D006058 ORTHO05D007686 1.4e-42 176.4 133 63.9
Peaxi162Scf00273g00034 Petunia axillaris HOM05D006058 ORTHO05D007686 4.0e-42 174.9 130 65.4
Actinidia00707 Actinidia chinensis HOM05D006058 ORTHO05D007686 5.3e-42 174.5 113 75.2
Atru.chr5.1299 Acer truncatum HOM05D006058 ORTHO05D007686 6.9e-42 174.1 130 67.7
AUR62036672 Chenopodium quinoa HOM05D006058 ORTHO05D007686 6.9e-42 174.1 126 66.7
Nitab4.5_0009592g0010 Nicotiana tabacum HOM05D006058 ORTHO05D007686 6.9e-42 174.1 128 66.4
Thecc.01G288100 Theobroma cacao HOM05D006058 ORTHO05D007686 1.2e-41 173.3 130 64.6
Peaxi162Scf00026g00313 Petunia axillaris HOM05D006058 ORTHO05D007686 2.0e-41 172.6 130 66.9
Glyma.01G089000 Glycine max HOM05D006058 ORTHO05D007686 2.6e-41 172.2 128 64.1
Glyma.04G146600 Glycine max HOM05D006058 ORTHO05D007686 2.6e-41 172.2 128 64.1
Nitab4.5_0001499g0140 Nicotiana tabacum HOM05D006058 ORTHO05D007686 2.6e-41 172.2 131 64.1
Ciclev10022776m.g Citrus clementina HOM05D006058 ORTHO05D007686 3.4e-41 171.8 130 65.4
TPR.G16722 Trifolium pratense HOM05D006058 ORTHO05D007686 3.4e-41 171.8 127 62.2
MD12G1212600 Malus domestica HOM05D006058 ORTHO05D007686 4.5e-41 171.4 134 64.9
Medtr3g010210 Medicago truncatula HOM05D006058 ORTHO05D007686 7.6e-41 170.6 127 63.0
HanXRQChr03g0093951 Helianthus annuus HOM05D006058 ORTHO05D007686 9.9e-41 170.2 134 61.9
unitig_0.g1187 Utricularia gibba HOM05D006058 ORTHO05D007686 9.9e-41 170.2 130 60.0
Aqoxy4G03219 Aquilegia oxysepala HOM05D006058 ORTHO05D007686 1.3e-40 169.9 128 65.6
Ah.10g033440 Amaranthus hybridus HOM05D006058 ORTHO05D007686 1.7e-40 169.5 132 64.4
Nitab4.5_0004672g0030 Nicotiana tabacum HOM05D006058 ORTHO05D007686 1.7e-40 169.5 130 63.8
Gohir.A12G007700 Gossypium hirsutum HOM05D006058 ORTHO05D007686 2.9e-40 168.7 130 61.5
TPR.G8807 Trifolium pratense HOM05D006058 ORTHO05D007686 2.9e-40 168.7 127 60.6
Phvul.002G050500 Phaseolus vulgaris HOM05D006058 ORTHO05D007686 3.8e-40 168.3 130 61.5
Rhsim13G0018500 Rhododendron simsii HOM05D003625 ORTHO05D004382 3.8e-40 168.3 129 65.9
Gohir.D12G007100 Gossypium hirsutum HOM05D006058 ORTHO05D007686 4.9e-40 167.9 130 60.8
QL12p042454 Quercus lobata HOM05D006058 ORTHO05D007686 6.4e-40 167.5 130 64.6
TPR.G22635 Trifolium pratense HOM05D006058 ORTHO05D007686 8.4e-40 167.2 130 60.8
COL.COLO4_08051 Corchorus olitorius HOM05D006058 ORTHO05D007686 1.1e-39 166.8 130 65.4
Gorai.008G007300 Gossypium raimondii HOM05D006058 ORTHO05D007686 1.1e-39 166.8 130 60.8
SalBow3G0902 Salvia bowleyana HOM05D006058 ORTHO05D007686 1.1e-39 166.8 128 61.7
CiPaw.07G098200 Carya illinoinensis HOM05D006058 ORTHO05D007686 1.4e-39 166.4 130 64.6
Hund02088 Selenicereus undatus HOM05D006058 ORTHO05D007686 2.4e-39 165.6 128 62.5
Cfa006057 Carpinus fangiana HOM05D006058 ORTHO05D007686 3.2e-39 165.2 130 63.1
MELO3C015303.2 Cucumis melo HOM05D006058 ORTHO05D007686 3.2e-39 165.2 131 62.6
CsaV3_1G038790 Cucumis sativus L. HOM05D006058 ORTHO05D007686 3.2e-39 165.2 131 62.6
MBI07_g41269_MAGBIO Magnolia biondii HOM05D006058 ORTHO05D007686 4.2e-39 164.9 130 64.6
HanXRQChr15g0476421 Helianthus annuus HOM05D006058 ORTHO05D007686 9.3e-39 163.7 135 62.2
CDE02G3716 Ceratophyllum demersum HOM05D006058 ORTHO05D007686 2.7e-38 162.2 128 59.4
PSO407G0089 Papaver somniferum HOM05D006058 ORTHO05D007686 3.5e-38 161.8 131 63.4
Solyc12g014020.2 Solanum lycopersicum HOM05D006058 ORTHO05D007686 4.6e-38 161.4 130 64.6
PSO170G2912 Papaver somniferum HOM05D006058 ORTHO05D007686 6.0e-38 161.0 131 61.8
Sopen12g005770 Solanum pennellii HOM05D006058 ORTHO05D007686 6.0e-38 161.0 118 68.6
Lju470C11T9 Lonicera japonica HOM05D006058 ORTHO05D007686 7.9e-38 160.6 129 63.6
Cc01_g20070 Coffea canephora HOM05D006058 ORTHO05D007686 1.0e-37 160.2 136 58.8
PGSC0003DMG400015370 Solanum tuberosum HOM05D006058 ORTHO05D007686 2.3e-37 159.1 132 65.2
Prupe.8G250400 Prunus persica HOM05D006058 ORTHO05D007686 3.9e-37 158.3 104 72.1
Hund29081 Selenicereus undatus HOM05D006058 ORTHO05D007686 6.7e-37 157.5 120 62.5
Hund29083 Selenicereus undatus HOM05D006058 ORTHO05D007686 6.7e-37 157.5 120 62.5
SHI14488 Sapria himalayana HOM05D006058 ORTHO05D007686 8.7e-37 157.1 134 61.2
Prupe.3G123100 Prunus persica HOM05D006058 ORTHO05D007686 1.9e-36 156.0 124 62.9
arahy.Tifrunner.gnm1.ann1.SHER6S Arachis hypogaea HOM05D006058 ORTHO05D007686 5.6e-36 154.5 113 65.5
arahy.Tifrunner.gnm1.ann1.Y2QWLJ Arachis hypogaea HOM05D006058 ORTHO05D007686 5.6e-36 154.5 113 65.5
Aa31LG10G11090 Aethionema arabicum HOM05D006058 ORTHO05D007686 7.4e-36 154.1 131 58.0
A06p30300 Brassica napus HOM05D006058 ORTHO05D007686 9.6e-36 153.7 131 55.7
CARHR277600 Cardamine hirsuta HOM05D006058 ORTHO05D007686 9.6e-36 153.7 130 58.5
BcaC01g02630 Brassica carinata HOM05D006058 ORTHO05D007686 2.1e-35 152.5 131 55.7
C03p62750 Brassica napus HOM05D006058 ORTHO05D007686 2.1e-35 152.5 131 55.7
BolC3t18529H Brassica oleracea HOM05D006058 ORTHO05D007686 2.1e-35 152.5 131 55.7
BraA06t25979Z Brassica rapa HOM05D006058 ORTHO05D007686 3.7e-35 151.8 131 55.7
THA.LOC104826323 Tarenaya hassleriana HOM05D006058 ORTHO05D007686 1.4e-34 149.8 131 55.7
AL8G40840 Arabidopsis lyrata HOM05D006058 ORTHO05D007686 3.1e-34 148.7 132 56.1
AT5G63690 Arabidopsis thaliana HOM05D006058 ORTHO05D007686 3.1e-34 148.7 131 54.2
Sp2g26790 Schrenkiella parvula HOM05D006058 ORTHO05D007686 3.1e-34 148.7 133 56.4
BcaB02g09737 Brassica carinata HOM05D006058 ORTHO05D007686 5.3e-34 147.9 133 54.1
ECA240G0292 Erigeron canadensis HOM05D006058 ORTHO05D007686 5.3e-34 147.9 119 63.9
Nn3g21231 Nelumbo nucifera HOM05D006058 ORTHO05D007686 5.3e-34 147.9 115 64.3
Thhalv10005102m.g Eutrema salsugineum HOM05D006058 ORTHO05D007686 1.5e-33 146.4 131 55.7
Carub.0008s2446 Capsella rubella HOM05D006058 ORTHO05D007686 2.6e-33 145.6 131 53.4
BcaC03g18221 Brassica carinata HOM05D006058 ORTHO05D007686 3.4e-33 145.2 134 53.7
BolC2t12363H Brassica oleracea HOM05D006058 ORTHO05D007686 3.4e-33 145.2 134 53.7
A02p42950 Brassica napus HOM05D006058 ORTHO05D007686 5.8e-33 144.4 134 53.7
HPP92_016068 Vanilla planifolia HOM05D006058 ORTHO05D007686 7.6e-33 144.1 127 56.7
Migut.D00240 Erythranthe guttata HOM05D006058 ORTHO05D007686 9.9e-33 143.7 133 54.9
SEGI_21939 Sequoiadendron giganteum HOM05D006058 ORTHO05D007686 9.9e-33 143.7 130 52.3
C02p62900 Brassica napus HOM05D006058 ORTHO05D007686 1.3e-32 143.3 132 53.8
VMungo1215G3318 Vigna mungo HOM05D006058 ORTHO05D007686 1.7e-32 142.9 110 60.9
BraA02t09218Z Brassica rapa HOM05D006058 ORTHO05D007686 2.2e-32 142.5 132 53.8
BcaB07g29701 Brassica carinata HOM05D006058 ORTHO05D007686 3.8e-32 141.7 134 53.7
EL10Ac7g17168 Beta vulgaris HOM05D006058 ORTHO05D007686 8.4e-32 140.6 128 54.7
ClCG03G017360 Citrullus lanatus HOM05D006058 ORTHO05D007686 1.9e-31 139.4 111 63.1
CAN.G964.10 Capsicum annuum HOM05D006058 ORTHO05D007686 3.2e-31 138.7 129 55.8
Eucgr.H01617 Eucalyptus grandis HOM05D006058 ORTHO05D007686 9.3e-31 137.1 128 54.7
Zm00001eb106990 Zea mays HOM05D006058 ORTHO05D007686 7.9e-30 134.0 135 51.1
Sed0020474 Sechium edule HOM05D006058 ORTHO05D007686 1.5e-28 129.8 107 60.7
AUR62034597 Chenopodium quinoa HOM05D006058 ORTHO05D007686 1.6e-27 126.3 87 69.0
Pp3c3_34830 Physcomitrium patens HOM05D006058 ORTHO05D007686 1.6e-27 126.3 112 52.7
Mapoly0068s0046 Marchantia polymorpha HOM05D006058 ORTHO05D007686 4.8e-27 124.8 108 51.9
Mapoly0122s0023 Marchantia polymorpha HOM05D006058 ORTHO05D007686 1.8e-26 122.9 114 51.8
AagrBONN_evm.TU.Sc2ySwM_369.269 Anthoceros agrestis HOM05D006058 ORTHO05D007686 4.0e-26 121.7 118 49.2
EL10Ac3g06921 Beta vulgaris HOM05D006058 ORTHO05D007686 9.0e-26 120.6 86 65.1
SMO244G0033 Selaginella moellendorffii HOM05D006058 ORTHO05D007686 1.2e-25 120.2 128 47.7
ATR0225G019 Amborella trichopoda HOM05D006058 ORTHO05D007686 2.0e-25 119.4 103 59.2
Sc05g0004330 Simmondsia chinensis HOM05D006058 ORTHO05D007686 2.0e-25 119.4 80 67.5
CBR_g26410 Chara braunii HOM05D006058 ORTHO05D007686 1.3e-24 116.7 116 50.0
BolC4t22707H Brassica oleracea HOM05D006058 ORTHO05D007686 3.5e-22 108.6 91 57.1
TAR365G0318 Trochodendron aralioides HOM05D006058 ORTHO05D007686 7.9e-22 107.5 78 62.8
Aa31LG1G18150 Aethionema arabicum HOM05D000706 ORTHO05D001554 5.7e-20 101.3 86 57.0
MBI07_g41268_MAGBIO Magnolia biondii HOM05D002731 ORTHO05D003073 6.3e-19 97.8 90 53.3
CBR_g24266 Chara braunii HOM05D006058 ORTHO05D007686 1.1e-18 97.1 112 42.0
vmacro09159 Vaccinium macrocarpon HOM05D006058 ORTHO05D007686 4.3e-12 75.1 46 71.7
QL12p023442 Quercus lobata HOM05D006058 ORTHO05D007686 8.2e-11 70.9 81 49.4


User provided reference genes

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