Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.10G060700 Manihot esculenta HOM05D007308 ORTHO05D009157 3.9e-66 254.6 124 100.0
Glyma.20G194000 Glycine max HOM05D007308 ORTHO05D009157 5.1e-50 201.1 120 75.8
Glyma.10G196200 Glycine max HOM05D007308 ORTHO05D009157 9.7e-49 196.8 120 74.2
Phvul.007G138800 Phaseolus vulgaris HOM05D007308 ORTHO05D009157 2.2e-48 195.7 121 75.2
TAR623G1715 Trochodendron aralioides HOM05D007308 ORTHO05D009157 8.2e-48 193.7 120 71.7
Hma1.2p1_0457F.1_g156910 Hydrangea macrophylla HOM05D007308 ORTHO05D009157 1.4e-47 193.0 120 74.2
Thecc.10G116800 Theobroma cacao HOM05D007308 ORTHO05D009157 1.8e-47 192.6 120 75.8
Dinv08592 Davidia involucrata HOM05D007308 ORTHO05D009157 6.9e-47 190.7 120 73.3
Duzib106G1839 Durio zibethinus HOM05D007308 ORTHO05D009157 6.9e-47 190.7 120 75.8
QL04p047115 Quercus lobata HOM05D007308 ORTHO05D009157 6.9e-47 190.7 120 75.0
Potri.010G241700 Populus trichocarpa HOM05D007308 ORTHO05D009157 2.0e-46 189.1 120 75.0
Lalb_Chr02g0150981 Lupinus albus HOM05D007308 ORTHO05D009157 2.6e-46 188.7 121 72.7
VMungo0720G2616 Vigna mungo HOM05D007308 ORTHO05D009157 3.4e-46 188.3 120 70.8
Lsat_1_v5_gn_3_53161 Lactuca sativa HOM05D007308 ORTHO05D009157 5.9e-46 187.6 120 70.0
PGR044G1814 Punica granatum HOM05D007308 ORTHO05D009157 5.9e-46 187.6 123 69.1
TWI15G0952 Tripterygium wilfordii HOM05D007308 ORTHO05D009157 1.0e-45 186.8 124 72.6
CiPaw.13G043100 Carya illinoinensis HOM05D007308 ORTHO05D009157 1.3e-45 186.4 120 72.5
Sabra10G0189200 Salix brachista HOM05D000139 ORTHO05D000103 1.3e-45 186.4 120 75.0
Lj5g0023307 Lotus japonicus HOM05D007308 ORTHO05D009157 1.7e-45 186.0 120 72.5
Rhsim09G0141500 Rhododendron simsii HOM05D007308 ORTHO05D009157 1.7e-45 186.0 120 72.5
GSVIVG01034647001 Vitis vinifera HOM05D007308 ORTHO05D009157 1.7e-45 186.0 120 72.5
vmacro10315 Vaccinium macrocarpon HOM05D007308 ORTHO05D009157 2.9e-45 185.3 120 73.3
Aqoxy1G00692 Aquilegia oxysepala HOM05D007308 ORTHO05D009157 5.0e-45 184.5 122 68.9
arahy.Tifrunner.gnm1.ann1.I1QH9V Arachis hypogaea HOM05D007308 ORTHO05D009157 5.0e-45 184.5 121 71.1
arahy.Tifrunner.gnm1.ann1.ZU0NEU Arachis hypogaea HOM05D007308 ORTHO05D009157 1.9e-44 182.6 120 70.8
CSS0004692 Camellia sinensis var. sinensis HOM05D007308 ORTHO05D009157 4.2e-44 181.4 120 70.0
Gorai.013G010700 Gossypium raimondii HOM05D007308 ORTHO05D009157 4.2e-44 181.4 120 70.0
Gohir.D13G010000 Gossypium hirsutum HOM05D007308 ORTHO05D009157 5.5e-44 181.0 120 70.0
Medtr1g090630 Medicago truncatula HOM05D007308 ORTHO05D009157 5.5e-44 181.0 120 71.7
THA.LOC104816471 Tarenaya hassleriana HOM05D007308 ORTHO05D009157 5.5e-44 181.0 118 69.5
MSTRG.27555 Avicennia marina HOM05D007308 ORTHO05D009157 7.2e-44 180.6 120 70.0
Gohir.A13G009300 Gossypium hirsutum HOM05D007308 ORTHO05D009157 7.2e-44 180.6 120 70.0
CANSAT56G1109 Cannabis sativa HOM05D007308 ORTHO05D009157 9.4e-44 180.3 122 70.5
MD07G1062000 Malus domestica HOM05D007308 ORTHO05D009157 9.4e-44 180.3 120 70.0
Ciclev10016517m.g Citrus clementina HOM05D007308 ORTHO05D009157 2.1e-43 179.1 120 69.2
CDE02G0914 Ceratophyllum demersum HOM05D007308 ORTHO05D009157 6.1e-43 177.6 120 65.0
MBI17_g22148_MAGBIO Magnolia biondii HOM05D007308 ORTHO05D009157 6.1e-43 177.6 122 68.9
Nn2g14273 Nelumbo nucifera HOM05D007308 ORTHO05D009157 7.9e-43 177.2 120 65.8
ECA232G3668 Erigeron canadensis HOM05D007308 ORTHO05D009157 1.8e-42 176.0 120 67.5
Sabra08G0011300 Salix brachista HOM05D007308 ORTHO05D009157 2.3e-42 175.6 120 69.2
Lalb_Chr21g0312841 Lupinus albus HOM05D007308 ORTHO05D009157 3.0e-42 175.3 120 66.7
PGR044G1810 Punica granatum HOM05D007308 ORTHO05D009157 3.9e-42 174.9 121 65.3
AT5G04830 Arabidopsis thaliana HOM05D007308 ORTHO05D009157 5.1e-42 174.5 118 68.6
Migut.F00856 Erythranthe guttata HOM05D007308 ORTHO05D009157 5.1e-42 174.5 120 67.5
SGA_v2.0_scaffold272G46352 Striga asiatica HOM05D007308 ORTHO05D009157 6.7e-42 174.1 132 64.4
HanXRQChr05g0147281 Helianthus annuus HOM05D007308 ORTHO05D009157 8.8e-42 173.7 120 65.8
Prupe.2G071800 Prunus persica HOM05D007308 ORTHO05D009157 8.8e-42 173.7 120 64.2
Eucgr.J00279 Eucalyptus grandis HOM05D007308 ORTHO05D009157 1.5e-41 172.9 120 68.3
Hund06794 Selenicereus undatus HOM05D007308 ORTHO05D009157 1.5e-41 172.9 122 67.2
Sc20g0001110 Simmondsia chinensis HOM05D007308 ORTHO05D009157 1.5e-41 172.9 120 68.3
Cc02_g09470 Coffea canephora HOM05D007308 ORTHO05D009157 2.5e-41 172.2 120 65.8
AL6G14490 Arabidopsis lyrata HOM05D007308 ORTHO05D009157 3.3e-41 171.8 118 67.8
BcaB01g05916 Brassica carinata HOM05D007308 ORTHO05D009157 3.3e-41 171.8 118 67.8
C03p02230 Brassica napus HOM05D007308 ORTHO05D009157 3.3e-41 171.8 118 67.8
BolC3t12774H Brassica oleracea HOM05D007308 ORTHO05D009157 3.3e-41 171.8 118 67.8
Lj3C924T9 Lonicera japonica HOM05D007308 ORTHO05D009157 3.3e-41 171.8 155 56.8
CiPaw.14G034600 Carya illinoinensis HOM05D007308 ORTHO05D009157 5.7e-41 171.0 115 68.7
Sp6g38000 Schrenkiella parvula HOM05D007308 ORTHO05D009157 1.3e-40 169.9 118 66.9
BcaC06g32190 Brassica carinata HOM05D007308 ORTHO05D009157 1.7e-40 169.5 118 66.9
A10p31380 Brassica napus HOM05D007308 ORTHO05D009157 2.2e-40 169.1 118 66.9
A03p01870 Brassica napus HOM05D007308 ORTHO05D009157 2.8e-40 168.7 118 66.9
BraA03t09557Z Brassica rapa HOM05D007308 ORTHO05D009157 2.8e-40 168.7 118 66.9
Aa31LG11G5650 Aethionema arabicum HOM05D007308 ORTHO05D009157 3.7e-40 168.3 117 66.7
Carub.0006s0371 Capsella rubella HOM05D007308 ORTHO05D009157 3.7e-40 168.3 118 66.1
PSO339G2601 Papaver somniferum HOM05D007308 ORTHO05D009157 3.7e-40 168.3 122 62.3
Thhalv10014751m.g Eutrema salsugineum HOM05D007308 ORTHO05D009157 4.8e-40 167.9 118 66.9
C09p72050 Brassica napus HOM05D007308 ORTHO05D009157 6.3e-40 167.5 118 66.1
ClCG05G021890 Citrullus lanatus HOM05D007308 ORTHO05D009157 1.4e-39 166.4 117 66.7
CARHR208450 Cardamine hirsuta HOM05D007308 ORTHO05D009157 2.4e-39 165.6 118 65.3
CsaV3_5G035250 Cucumis sativus L. HOM05D007308 ORTHO05D009157 4.1e-39 164.9 117 66.7
PSO384G3587 Papaver somniferum HOM05D007308 ORTHO05D009157 4.1e-39 164.9 122 60.7
MELO3C012339.2 Cucumis melo HOM05D007308 ORTHO05D009157 9.1e-39 163.7 114 67.5
Os01g0965900 Oryza sativa ssp. japonica HOM05D007308 ORTHO05D009157 9.1e-39 163.7 120 63.3
BolC9t59950H Brassica oleracea HOM05D007308 ORTHO05D009157 2.6e-38 162.2 126 62.7
Sed0002245 Sechium edule HOM05D007308 ORTHO05D009157 2.6e-38 162.2 117 67.5
BraA10t45184Z Brassica rapa HOM05D007308 ORTHO05D009157 3.4e-38 161.8 126 62.7
Sed0004755 Sechium edule HOM05D007308 ORTHO05D009157 4.5e-38 161.4 117 64.1
HPP92_005473 Vanilla planifolia HOM05D007308 ORTHO05D009157 4.5e-38 161.4 120 61.7
PGSC0003DMG400001980 Solanum tuberosum HOM05D007308 ORTHO05D009157 7.7e-38 160.6 120 65.8
Nitab4.5_0001047g0020 Nicotiana tabacum HOM05D007308 ORTHO05D009157 1.3e-37 159.8 120 64.2
Zm00001eb362380 Zea mays HOM05D007308 ORTHO05D009157 1.3e-37 159.8 120 60.8
Haze_03470 Corylus avellana HOM05D007308 ORTHO05D009157 2.9e-37 158.7 106 68.9
unitig_32.g11899 Utricularia gibba HOM05D007308 ORTHO05D009157 8.5e-37 157.1 120 60.0
Peaxi162Scf00725g00524 Petunia axillaris HOM05D007308 ORTHO05D009157 1.4e-36 156.4 120 64.2
SalBow3G3836 Salvia bowleyana HOM05D007308 ORTHO05D009157 1.9e-36 156.0 120 63.3
ATR0772G202 Amborella trichopoda HOM05D007308 ORTHO05D009157 5.5e-36 154.5 119 58.8
CSS0017788 Camellia sinensis var. sinensis HOM05D007308 ORTHO05D009157 2.6e-33 145.6 120 60.0
Mapoly0021s0141 Marchantia polymorpha HOM05D007308 ORTHO05D009157 3.3e-33 145.2 123 56.9
SEGI_14438 Sequoiadendron giganteum HOM05D007308 ORTHO05D009157 2.8e-32 142.1 122 57.4
AagrBONN_evm.TU.Sc2ySwM_344.2550 Anthoceros agrestis HOM05D007308 ORTHO05D009157 2.6e-30 135.6 123 54.5
Pp3c19_15880 Physcomitrium patens HOM05D007308 ORTHO05D009157 1.3e-29 133.3 122 56.6
Solyc11g006505.1 Solanum lycopersicum HOM05D007308 ORTHO05D009157 6.5e-29 131.0 103 63.1
Sopen11g002410 Solanum pennellii HOM05D007308 ORTHO05D009157 8.5e-29 130.6 103 63.1
Pp3c1_28520 Physcomitrium patens HOM05D007308 ORTHO05D009157 1.5e-28 129.8 119 54.6
Pp3c14_20980 Physcomitrium patens HOM05D007308 ORTHO05D009157 6.1e-27 124.4 122 53.3
SMO143G0271 Selaginella moellendorffii HOM05D007308 ORTHO05D009157 4.0e-26 121.7 121 53.7
Actinidia34730 Actinidia chinensis HOM05D000139 ORTHO05D000103 8.8e-26 120.6 77 71.4
Potri.008G017701 Populus trichocarpa HOM05D007308 ORTHO05D009157 8.8e-26 120.6 80 66.2
BcaNung05151 Brassica carinata HOM05D007308 ORTHO05D009157 3.7e-24 115.2 129 49.6
Atru.BG.262.p Acer truncatum HOM05D007308 ORTHO05D009157 6.3e-24 114.4 80 68.8
SEGI_29808 Sequoiadendron giganteum HOM05D007308 ORTHO05D009157 4.1e-23 111.7 89 58.4
SMO265G0003 Selaginella moellendorffii HOM05D007308 ORTHO05D009157 1.2e-22 110.2 121 51.2
RcHm_v2.0_Chr1g0331851 Rosa chinensis HOM05D007308 ORTHO05D009157 2.9e-21 105.5 78 62.8
PGSC0003DMG400007605 Solanum tuberosum HOM05D000011 ORTHO05D000018 3.7e-08 62.0 44 61.4
Actinidia27055 Actinidia chinensis HOM05D007308 ORTHO05D009157 8.3e-08 60.8 67 50.7
Pp3c2_31450 Physcomitrium patens HOM05D007308 ORTHO05D009157 9.2e-07 57.4 72 48.6
CBR_g30213 Chara braunii HOM05D007308 ORTHO05D009157 1.2e-06 57.0 113 33.6
Sopen11g002430 Solanum pennellii HOM05D000011 ORTHO05D000018 7.7e-06 54.3 45 55.6


User provided reference genes

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