Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.10G059200 Manihot esculenta HOM05D006565 ORTHO05D008717 1.9e-195 685.6 339 100.0
Potri.010G243900 Populus trichocarpa HOM05D006565 ORTHO05D008717 1.2e-144 516.9 314 81.8
Thecc.10G119100 Theobroma cacao HOM05D006565 ORTHO05D008717 8.6e-140 500.7 313 77.6
Ciclev10015763m.g Citrus clementina HOM05D006565 ORTHO05D008717 1.9e-139 499.6 322 75.5
Sabra10G0190700 Salix brachista HOM05D006565 ORTHO05D008717 3.3e-139 498.8 389 67.6
Duzib114G0050 Durio zibethinus HOM05D006565 ORTHO05D008717 4.0e-137 491.9 297 80.1
Lj5g0019410 Lotus japonicus HOM05D006565 ORTHO05D008717 2.2e-135 486.1 325 75.4
Glyma.20G195000 Glycine max HOM05D006565 ORTHO05D008717 3.7e-135 485.3 311 75.2
Gorai.009G302300 Gossypium raimondii HOM05D006565 ORTHO05D008717 1.1e-134 483.8 312 75.3
QL04p048612 Quercus lobata HOM05D006565 ORTHO05D008717 2.4e-134 482.6 343 71.4
CiPaw.14G036000 Carya illinoinensis HOM05D006565 ORTHO05D008717 3.1e-134 482.3 338 70.7
Gohir.D05G287300 Gossypium hirsutum HOM05D006565 ORTHO05D008717 3.1e-134 482.3 312 75.0
Atru.chr12.1084 Acer truncatum HOM05D006565 ORTHO05D008717 5.4e-134 481.5 349 70.5
Gohir.A05G286300 Gossypium hirsutum HOM05D006565 ORTHO05D008717 5.4e-134 481.5 319 73.7
TAR636G0179 Trochodendron aralioides HOM05D006565 ORTHO05D008717 2.7e-133 479.2 315 74.0
GSVIVG01034599001 Vitis vinifera HOM05D006565 ORTHO05D008717 1.0e-132 477.2 332 72.6
Prupe.2G073700 Prunus persica HOM05D006565 ORTHO05D008717 1.1e-131 473.8 312 75.0
MD07G1062700 Malus domestica HOM05D006565 ORTHO05D008717 2.5e-131 472.6 312 74.7
Lalb_Chr06g0169851 Lupinus albus HOM05D006565 ORTHO05D008717 4.3e-131 471.9 318 73.0
arahy.Tifrunner.gnm1.ann1.V0HLME Arachis hypogaea HOM05D006565 ORTHO05D008717 1.2e-130 470.3 300 76.3
arahy.Tifrunner.gnm1.ann1.51BCJ8 Arachis hypogaea HOM05D006565 ORTHO05D008717 6.1e-130 468.0 297 76.4
COL.COLO4_10008 Corchorus olitorius HOM05D006565 ORTHO05D008717 6.1e-130 468.0 301 77.1
Eucgr.G02667 Eucalyptus grandis HOM05D006565 ORTHO05D008717 6.1e-130 468.0 301 75.7
RcHm_v2.0_Chr1g0332191 Rosa chinensis HOM05D006565 ORTHO05D008717 1.8e-129 466.5 307 75.6
ClCG05G021990 Citrullus lanatus HOM05D006565 ORTHO05D008717 4.0e-129 465.3 332 70.5
Actinidia34736 Actinidia chinensis HOM05D006565 ORTHO05D008717 5.2e-129 464.9 322 72.7
Aqoxy1G00616 Aquilegia oxysepala HOM05D006565 ORTHO05D008717 6.8e-129 464.5 295 75.9
TWI15G0448 Tripterygium wilfordii HOM05D006565 ORTHO05D008717 6.8e-129 464.5 338 69.8
FvH4_7g05460 Fragaria vesca HOM05D006565 ORTHO05D008717 8.9e-129 464.2 313 73.5
Cc02_g09290 Coffea canephora HOM05D006565 ORTHO05D008717 7.5e-128 461.1 289 75.4
Ca_10426_v3 Cicer arietinum L. HOM05D006565 ORTHO05D008717 1.3e-127 460.3 282 78.4
MELO3C012330.2 Cucumis melo HOM05D006565 ORTHO05D008717 1.4e-126 456.8 332 70.2
TPR.G10259 Trifolium pratense HOM05D006565 ORTHO05D008717 2.4e-126 456.1 293 74.7
VMungo0720G0186 Vigna mungo HOM05D006565 ORTHO05D008717 4.1e-126 455.3 311 72.7
vmacro10331 Vaccinium macrocarpon HOM05D006565 ORTHO05D008717 5.4e-126 454.9 342 68.7
A03p21520 Brassica napus HOM05D006565 ORTHO05D008717 7.0e-126 454.5 307 72.3
HanXRQChr08g0217341 Helianthus annuus HOM05D006565 ORTHO05D008717 2.0e-125 453.0 323 71.8
Sc07g0003130 Simmondsia chinensis HOM05D006565 ORTHO05D008717 2.0e-125 453.0 289 75.8
Medtr1g090380 Medicago truncatula HOM05D006565 ORTHO05D008717 2.7e-125 452.6 294 74.8
THA.LOC104801973 Tarenaya hassleriana HOM05D006565 ORTHO05D008717 2.7e-125 452.6 322 71.1
CsaV3_5G035170 Cucumis sativus L. HOM05D006565 ORTHO05D008717 6.0e-125 451.4 287 76.3
Rhsim09G0140500 Rhododendron simsii HOM05D006565 ORTHO05D008717 6.0e-125 451.4 316 72.5
Solyc11g006420.2 Solanum lycopersicum HOM05D006565 ORTHO05D008717 1.1e-123 447.2 320 69.1
CAN.G143.52 Capsicum annuum HOM05D006565 ORTHO05D008717 1.9e-123 446.4 331 68.3
ECA233G2794 Erigeron canadensis HOM05D006565 ORTHO05D008717 1.2e-122 443.7 303 71.9
Nn2g14368 Nelumbo nucifera HOM05D006565 ORTHO05D008717 1.6e-122 443.4 317 68.5
PSO339G2240 Papaver somniferum HOM05D006565 ORTHO05D008717 1.6e-122 443.4 319 68.0
Psat6g171600 Pisum sativum HOM05D006565 ORTHO05D008717 1.6e-122 443.4 319 69.3
Dinv03812 Davidia involucrata HOM05D006565 ORTHO05D008717 2.1e-122 443.0 355 65.6
Sopen11g002320 Solanum pennellii HOM05D006565 ORTHO05D008717 2.1e-122 443.0 291 73.2
SGA_v2.0_scaffold90G27708 Striga asiatica HOM05D006565 ORTHO05D008717 2.1e-122 443.0 301 73.4
Migut.F00832 Erythranthe guttata HOM05D006565 ORTHO05D008717 3.6e-122 442.2 314 69.7
Sp4g21020 Schrenkiella parvula HOM05D006565 ORTHO05D008717 1.1e-121 440.7 319 69.3
Sed0004638 Sechium edule HOM05D006565 ORTHO05D008717 1.1e-121 440.7 286 75.2
CANSAT56G1291 Cannabis sativa HOM05D006565 ORTHO05D008717 1.4e-121 440.3 347 66.6
Carub.0004s2066 Capsella rubella HOM05D006565 ORTHO05D008717 2.3e-121 439.5 319 69.0
AUR62014278 Chenopodium quinoa HOM05D006565 ORTHO05D008717 4.0e-121 438.7 342 64.3
CARHR133350 Cardamine hirsuta HOM05D006565 ORTHO05D008717 1.5e-120 436.8 305 70.8
HPP92_013938 Vanilla planifolia HOM05D006565 ORTHO05D008717 1.5e-120 436.8 289 72.7
Lj3A921T38 Lonicera japonica HOM05D006565 ORTHO05D008717 3.4e-120 435.6 271 78.2
Os03g0648900 Oryza sativa ssp. japonica HOM05D006565 ORTHO05D008717 4.4e-120 435.3 288 72.6
HanXRQChr02g0049321 Helianthus annuus HOM05D006565 ORTHO05D008717 5.8e-120 434.9 290 74.1
Thhalv10016992m.g Eutrema salsugineum HOM05D006565 ORTHO05D008717 9.8e-120 434.1 295 72.9
MSTRG.9025 Avicennia marina HOM05D006565 ORTHO05D008717 1.3e-119 433.7 289 72.7
ATR0697G221 Amborella trichopoda HOM05D006565 ORTHO05D008717 4.9e-119 431.8 305 68.9
AUR62034160 Chenopodium quinoa HOM05D006565 ORTHO05D008717 4.9e-119 431.8 299 70.6
PGSC0003DMG400014108 Solanum tuberosum HOM05D006565 ORTHO05D008717 4.9e-119 431.8 291 71.1
Phvul.007G137100 Phaseolus vulgaris HOM05D006565 ORTHO05D008717 2.4e-118 429.5 306 69.9
BolC3t14938H Brassica oleracea HOM05D006565 ORTHO05D008717 4.1e-118 428.7 308 69.2
BraA03t11388Z Brassica rapa HOM05D006565 ORTHO05D008717 1.2e-117 427.2 285 73.3
EL10Ac4g08734 Beta vulgaris HOM05D006565 ORTHO05D008717 2.1e-117 426.4 291 71.8
Peaxi162Scf00120g01317 Petunia axillaris HOM05D006565 ORTHO05D008717 2.1e-117 426.4 326 65.6
AT2G38680 Arabidopsis thaliana HOM05D006565 ORTHO05D008717 2.7e-117 426.0 301 70.1
Dinv06042 Davidia involucrata HOM05D006565 ORTHO05D008717 4.6e-117 425.2 283 74.6
RhsimUnG0215000 Rhododendron simsii HOM05D006565 ORTHO05D008717 6.0e-117 424.9 375 61.6
Zm00001eb218510 Zea mays HOM05D006565 ORTHO05D008717 1.3e-116 423.7 288 70.8
C03p25510 Brassica napus HOM05D006565 ORTHO05D008717 3.9e-116 422.2 319 66.8
Lsat_1_v5_gn_8_21800 Lactuca sativa HOM05D006565 ORTHO05D008717 2.5e-115 419.5 304 69.1
Hund06810 Selenicereus undatus HOM05D006565 ORTHO05D008717 1.4e-110 403.7 301 68.1
Oeu009252.1 Olea europaea HOM05D006565 ORTHO05D008717 2.1e-109 399.8 295 69.5
Nitab4.5_0001781g0210 Nicotiana tabacum HOM05D006565 ORTHO05D008717 5.1e-108 395.2 291 68.0
CDE06G1733 Ceratophyllum demersum HOM05D006565 ORTHO05D008717 8.9e-105 384.4 270 71.1
FAN01G3085 Fragaria x ananassa HOM05D006565 ORTHO05D008717 1.5e-104 383.6 307 65.8
FAN06G1903 Fragaria x ananassa HOM05D006565 ORTHO05D008717 1.4e-102 377.1 299 66.9
SEGI_36612 Sequoiadendron giganteum HOM05D006565 ORTHO05D008717 1.6e-101 373.6 268 67.9
SMO367G1082 Selaginella moellendorffii HOM05D006565 ORTHO05D008717 3.9e-100 369.0 288 61.8
FAN10G4168 Fragaria x ananassa HOM05D006565 ORTHO05D008717 1.1e-97 360.9 324 61.4
Prupe.2G074100 Prunus persica HOM05D006565 ORTHO05D008717 4.4e-96 355.5 217 79.3
Pp3c1_24570 Physcomitrium patens HOM05D006565 ORTHO05D008717 9.9e-96 354.4 286 60.5
FAN21G0259 Fragaria x ananassa HOM05D006565 ORTHO05D008717 3.8e-95 352.4 272 67.3
AagrBONN_evm.TU.Sc2ySwM_228.2835 Anthoceros agrestis HOM05D006565 ORTHO05D008717 6.4e-95 351.7 283 61.8
AL4G35960 Arabidopsis lyrata HOM05D006565 ORTHO05D008717 1.0e-92 344.4 293 60.8
Mapoly0082s0075 Marchantia polymorpha HOM05D006565 ORTHO05D008717 6.2e-90 335.1 266 59.8
PGSC0003DMG400001988 Solanum tuberosum HOM05D006565 ORTHO05D008717 1.2e-85 320.9 206 73.8
FvH4_1g27810 Fragaria vesca HOM05D006565 ORTHO05D008717 7.6e-80 301.6 277 61.4
CBR_g36829 Chara braunii HOM05D006565 ORTHO05D001468 1.5e-75 287.3 391 41.2
Nitab4.5_0016854g0010 Nicotiana tabacum HOM05D006565 ORTHO05D008717 1.3e-74 284.3 221 66.5
Sabra13G0091500 Salix brachista HOM05D006565 ORTHO05D008717 1.1e-65 254.6 157 80.3
MBI05_g36782_MAGBIO Magnolia biondii HOM05D006565 ORTHO05D008717 3.1e-65 253.1 159 77.4
Haze_03436 Corylus avellana HOM05D006565 ORTHO05D008717 9.0e-65 251.5 307 48.2
Potri.008G015201 Populus trichocarpa HOM05D006565 ORTHO05D008717 5.0e-63 245.7 142 84.5
Lj3A922G54 Lonicera japonica HOM05D006565 ORTHO05D008717 1.4e-57 227.6 163 68.7
PSO384G3661 Papaver somniferum HOM05D006565 ORTHO05D008717 3.8e-47 193.0 171 57.9
FAN10G3234 Fragaria x ananassa HOM05D006565 ORTHO05D008717 2.5e-46 190.3 277 44.4
Hma1.2p1_0098F.1_g048200 Hydrangea macrophylla HOM05D006565 ORTHO05D008717 8.0e-45 185.3 108 81.5
Glyma.10G195001 Glycine max HOM05D006565 ORTHO05D008717 9.1e-41 171.8 107 72.9
FAN03G2487 Fragaria x ananassa HOM05D006565 ORTHO05D008717 1.6e-40 171.0 210 50.5
FAN10G0629 Fragaria x ananassa HOM05D006565 ORTHO05D008717 3.5e-40 169.9 210 50.5
Lj3A922G55 Lonicera japonica HOM05D006565 ORTHO05D008717 2.6e-35 153.7 89 82.0
Cpa.g.sc33.129 Carica papaya HOM05D006565 ORTHO05D008717 2.8e-34 150.2 98 71.4
Cpa.g.sc33.128 Carica papaya HOM05D006565 ORTHO05D008717 1.8e-33 147.5 82 84.1
CSS0040424 Camellia sinensis var. sinensis HOM05D006565 ORTHO05D008717 8.6e-23 112.1 66 74.2
CSS0049814 Camellia sinensis var. sinensis HOM05D006565 ORTHO05D008717 2.3e-20 104.0 57 86.0
RhsimUnG0214900 Rhododendron simsii HOM05D006565 ORTHO05D008717 4.4e-19 99.8 81 65.4
Aqoxy6G01578 Aquilegia oxysepala HOM05D006565 ORTHO05D008717 2.4e-17 94.0 144 41.0
MBI15_g31580_MAGBIO Magnolia biondii HOM05D001433 ORTHO05D011977 2.5e-14 84.0 60 68.3
MBI08_g05402_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 7.3e-14 82.4 56 71.4
Aqoxy6G01581 Aquilegia oxysepala HOM05D006565 ORTHO05D000596 1.4e-09 68.2 50 62.0
MBI17_g02193_MAGBIO Magnolia biondii HOM05D006565 ORTHO05D011977 3.2e-09 67.0 44 75.0
MBI05_g33289_MAGBIO Magnolia biondii HOM05D006565 ORTHO05D008717 2.0e-08 64.3 44 75.0
Psat7g239080 Pisum sativum HOM05D005767 ORTHO05D006785 2.7e-08 63.9 107 39.3
MBI06_g14037_MAGBIO Magnolia biondii HOM05D001433 ORTHO05D011977 5.6e-06 56.2 45 62.2


User provided reference genes

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