Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.10G058650 Manihot esculenta HOM05D005062 ORTHO05D006410 1.5e-226 789.3 417 100.0
Potri.008G021600 Populus trichocarpa HOM05D005062 ORTHO05D006410 4.8e-169 598.2 418 76.1
Sabra08G0014600 Salix brachista HOM05D005062 ORTHO05D006410 2.9e-166 589.0 418 75.8
MD02G1255900 Malus domestica HOM05D005062 ORTHO05D006410 4.7e-156 555.1 423 70.7
Cfa010314 Carpinus fangiana HOM05D005062 ORTHO05D006410 5.7e-154 548.1 420 70.2
CiPaw.13G040200 Carya illinoinensis HOM05D005062 ORTHO05D006410 3.7e-153 545.4 421 69.6
Atru.chr12.1008 Acer truncatum HOM05D005062 ORTHO05D006410 3.2e-152 542.3 417 70.0
Duzib106G1045 Durio zibethinus HOM05D005062 ORTHO05D006410 2.0e-151 539.7 417 71.7
PGR044G2170 Punica granatum HOM05D005062 ORTHO05D006410 2.7e-151 539.3 426 70.7
QL04p046667 Quercus lobata HOM05D005062 ORTHO05D006410 1.7e-150 536.6 447 66.4
RcHm_v2.0_Chr1g0332571 Rosa chinensis HOM05D005062 ORTHO05D006410 8.6e-150 534.3 423 69.3
Eucgr.J00992 Eucalyptus grandis HOM05D005062 ORTHO05D006410 6.8e-147 524.6 418 68.9
Cpa.g.sc183.10 Carica papaya HOM05D005062 ORTHO05D006410 4.9e-145 518.5 423 66.2
FvH4_7g05590 Fragaria vesca HOM05D005062 ORTHO05D006410 1.1e-144 517.3 429 68.1
FAN01G3081 Fragaria x ananassa HOM05D005062 ORTHO05D006410 1.1e-144 517.3 429 68.1
FAN10G1073 Fragaria x ananassa HOM05D005062 ORTHO05D006410 1.2e-143 513.8 429 67.8
GSVIVG01011284001 Vitis vinifera HOM05D005062 ORTHO05D006410 6.0e-143 511.5 451 64.7
Dinv11848 Davidia involucrata HOM05D005062 ORTHO05D006410 5.6e-141 505.0 341 78.0
Gorai.008G099000 Gossypium raimondii HOM05D005062 ORTHO05D006410 9.5e-141 504.2 418 67.0
CSS0050380 Camellia sinensis var. sinensis HOM05D005062 ORTHO05D006410 1.8e-139 500.0 421 66.7
Gohir.A12G092722 Gossypium hirsutum HOM05D005062 ORTHO05D006410 1.8e-139 500.0 414 66.9
FAN23G1954 Fragaria x ananassa HOM05D005062 ORTHO05D006410 9.8e-138 494.2 379 70.7
HanXRQChr08g0217771 Helianthus annuus HOM05D005062 ORTHO05D006410 4.9e-137 491.9 435 63.7
Medtr1g050462 Medicago truncatula HOM05D005062 ORTHO05D006410 6.4e-137 491.5 408 64.0
TAR623G1543 Trochodendron aralioides HOM05D005062 ORTHO05D006410 6.4e-137 491.5 415 65.5
FAN06G1220 Fragaria x ananassa HOM05D005062 ORTHO05D006410 1.4e-136 490.3 403 68.5
Glyma.10G111800 Glycine max HOM05D005062 ORTHO05D006410 3.2e-136 489.2 417 63.1
CSS0021342 Camellia sinensis var. sinensis HOM05D005062 ORTHO05D006410 4.1e-136 488.8 425 65.4
FAN23G1474 Fragaria x ananassa HOM05D005062 ORTHO05D006410 2.1e-135 486.5 347 74.9
CsaV3_2G034960 Cucumis sativus L. HOM05D005062 ORTHO05D006410 1.0e-134 484.2 399 65.2
Solyc07g014740.3 Solanum lycopersicum HOM05D005062 ORTHO05D006410 3.0e-134 482.6 421 64.1
DCAR_006341 Daucus carota HOM05D005062 ORTHO05D006410 5.1e-134 481.9 422 61.1
Phvul.007G247700 Phaseolus vulgaris HOM05D005062 ORTHO05D006410 8.6e-134 481.1 413 65.1
Oeu026579.1 Olea europaea HOM05D005062 ORTHO05D006410 1.9e-133 479.9 429 62.9
Nn2g14130 Nelumbo nucifera HOM05D005062 ORTHO05D006410 2.5e-133 479.6 428 61.7
THA.LOC104824209 Tarenaya hassleriana HOM05D005062 ORTHO05D006410 9.5e-133 477.6 411 64.2
Ca_12731_v3 Cicer arietinum L. HOM05D005062 ORTHO05D006410 2.8e-132 476.1 416 61.8
Nitab4.5_0010225g0010 Nicotiana tabacum HOM05D005062 ORTHO05D006410 3.6e-132 475.7 422 63.7
CAN.G54.5 Capsicum annuum HOM05D005062 ORTHO05D006410 1.4e-131 473.8 411 65.7
Lj5g0026270 Lotus japonicus HOM05D005062 ORTHO05D006410 1.4e-131 473.8 423 61.5
Lalb_Chr19g0129181 Lupinus albus HOM05D005062 ORTHO05D006410 1.4e-131 473.8 429 62.0
SalBow6G6867 Salvia bowleyana HOM05D005062 ORTHO05D006410 1.5e-130 470.3 341 72.7
FAN23G2695 Fragaria x ananassa HOM05D005062 ORTHO05D006410 2.6e-130 469.5 437 62.0
ECA233G2289 Erigeron canadensis HOM05D005062 ORTHO05D006410 4.4e-130 468.8 412 63.6
Migut.F01613 Erythranthe guttata HOM05D005062 ORTHO05D006410 1.7e-129 466.8 369 69.6
Lsat_1_v5_gn_8_23960 Lactuca sativa HOM05D005062 ORTHO05D006410 3.2e-128 462.6 425 62.8
arahy.Tifrunner.gnm1.ann1.BZ57JC Arachis hypogaea HOM05D005062 ORTHO05D006410 7.1e-128 461.5 421 61.0
Sp5g06340 Schrenkiella parvula HOM05D005062 ORTHO05D006410 4.6e-127 458.8 401 63.8
AT3G56160 Arabidopsis thaliana HOM05D005062 ORTHO05D006410 6.0e-127 458.4 412 63.1
arahy.Tifrunner.gnm1.ann1.ZAGE2X Arachis hypogaea HOM05D005062 ORTHO05D006410 1.0e-126 457.6 409 61.6
FAN03G1004 Fragaria x ananassa HOM05D005062 ORTHO05D006410 1.0e-126 457.6 474 59.3
Cc02_g09770 Coffea canephora HOM05D005062 ORTHO05D006410 1.7e-126 456.8 339 71.7
Peaxi162Scf00235g10011 Petunia axillaris HOM05D005062 ORTHO05D006410 1.7e-126 456.8 422 61.1
AL5G37480 Arabidopsis lyrata HOM05D005062 ORTHO05D006410 2.3e-126 456.4 403 62.5
Actinidia18593 Actinidia chinensis HOM05D000444 ORTHO05D000489 8.6e-126 454.5 408 63.2
MSTRG.8110 Avicennia marina HOM05D005062 ORTHO05D006410 2.5e-125 453.0 430 60.0
AUR62034504 Chenopodium quinoa HOM05D005062 ORTHO05D006410 2.5e-125 453.0 357 65.8
CDE06G2329 Ceratophyllum demersum HOM05D005062 ORTHO05D006410 2.8e-124 449.5 383 62.9
Aqoxy2G01214 Aquilegia oxysepala HOM05D005062 ORTHO05D006410 4.7e-124 448.7 419 60.6
BraA09t40366Z Brassica rapa HOM05D005062 ORTHO05D006410 6.9e-123 444.9 405 63.0
BcaC07g39930 Brassica carinata HOM05D002435 ORTHO05D002550 2.0e-122 443.4 390 62.8
BolC8t50765H Brassica oleracea HOM05D002435 ORTHO05D002550 2.0e-122 443.4 390 62.8
A09p49130 Brassica napus HOM05D002435 ORTHO05D002550 2.6e-122 443.0 400 63.5
Rhsim03G0099700 Rhododendron simsii HOM05D005062 ORTHO05D006410 4.4e-122 442.2 500 53.6
Lsat_1_v5_gn_2_104621 Lactuca sativa HOM05D005062 ORTHO05D006410 5.8e-122 441.8 429 58.5
HanXRQChr11g0342201 Helianthus annuus HOM05D005062 ORTHO05D006410 4.9e-121 438.7 431 57.1
ATR0081G026 Amborella trichopoda HOM05D005062 ORTHO05D006410 8.4e-121 438.0 343 65.6
BcaB01g00026 Brassica carinata HOM05D002435 ORTHO05D002550 8.4e-121 438.0 384 64.1
C08p31440 Brassica napus HOM05D002435 ORTHO05D002550 1.2e-119 434.1 370 65.1
ECA238G3155 Erigeron canadensis HOM05D005062 ORTHO05D006410 3.5e-119 432.6 379 61.5
GSVIVG01036146001 Vitis vinifera HOM05D005062 ORTHO05D006410 1.9e-117 426.8 375 61.6
Thhalv10006005m.g Eutrema salsugineum HOM05D005062 ORTHO05D006410 3.4e-114 416.0 395 61.0
Os02g0531200 Oryza sativa ssp. japonica HOM05D005062 ORTHO05D006410 3.4e-114 416.0 346 62.7
CiPaw.14G101300 Carya illinoinensis HOM05D005062 ORTHO05D006410 3.5e-111 406.0 375 57.1
HanXRQChr08g0217571 Helianthus annuus HOM05D005062 ORTHO05D006410 3.5e-111 406.0 345 61.7
Sed0016949 Sechium edule HOM05D005062 ORTHO05D006410 1.3e-110 404.1 360 62.2
Sopen07g005620 Solanum pennellii HOM05D000002 ORTHO05D000001 3.3e-109 399.4 366 62.6
TPR.G10638 Trifolium pratense HOM05D005062 ORTHO05D006410 1.6e-108 397.1 278 72.7
Thecc.10G106400 Theobroma cacao HOM05D005062 ORTHO05D006410 6.9e-107 391.7 318 67.6
HPP92_007815 Vanilla planifolia HOM05D005062 ORTHO05D006410 6.9e-107 391.7 373 58.2
Eucgr.B03869 Eucalyptus grandis HOM05D005062 ORTHO05D006410 1.7e-105 387.1 350 57.4
EL10As25g24233 Beta vulgaris HOM05D005062 ORTHO05D006410 2.9e-105 386.3 470 48.5
PGR102G2753 Punica granatum HOM05D005062 ORTHO05D006410 1.6e-103 380.6 399 51.9
Sc12g0004460 Simmondsia chinensis HOM05D005062 ORTHO05D006410 3.5e-103 379.4 405 53.1
Gohir.D12G091480 Gossypium hirsutum HOM05D005062 ORTHO05D006410 6.2e-100 368.6 320 65.0
Ah.09g232820 Amaranthus hybridus HOM05D005062 ORTHO05D006410 1.1e-96 357.8 364 54.9
Ah.08g215800 Amaranthus hybridus HOM05D005062 ORTHO05D006410 2.1e-95 353.6 342 55.0
VMungo0720G3089 Vigna mungo HOM05D000444 ORTHO05D000489 1.3e-94 350.9 477 46.8
Ciclev10032297m.g Citrus clementina HOM05D005062 ORTHO05D006410 5.1e-94 349.0 286 67.8
Hund06778 Selenicereus undatus HOM05D005062 ORTHO05D006410 2.2e-89 333.6 360 53.6
CiPaw.14G101100 Carya illinoinensis HOM05D005062 ORTHO05D006410 1.3e-86 324.3 384 49.7
Prupe.2G079400 Prunus persica HOM05D005062 ORTHO05D006410 3.2e-80 303.1 263 65.4
Zm00001eb242730 Zea mays HOM05D005062 ORTHO05D006410 2.7e-79 300.1 239 65.3
unitig_578.g16343 Utricularia gibba HOM05D005062 ORTHO05D006410 7.4e-77 292.0 340 52.4
MD02G1256100 Malus domestica HOM05D005062 ORTHO05D006410 2.6e-74 283.5 249 63.5
CARHR166310 Cardamine hirsuta HOM05D005062 ORTHO05D006410 3.4e-74 283.1 223 69.1
SGA_v2.0_scaffold13G06459 Striga asiatica HOM05D005062 ORTHO05D006410 1.9e-72 277.3 358 51.1
Sc20g0001180 Simmondsia chinensis HOM05D003607 ORTHO05D004049 4.2e-72 276.2 231 64.9
AUR62009772 Chenopodium quinoa HOM05D005062 ORTHO05D006410 7.9e-71 271.9 422 44.1
Zm00001eb296300 Zea mays HOM05D005062 ORTHO05D006410 7.9e-71 271.9 242 58.3
Lj3A928T57 Lonicera japonica HOM05D005062 ORTHO05D006410 9.7e-69 265.0 244 63.5
Carub.0005s2291 Capsella rubella HOM05D005062 ORTHO05D006410 2.0e-66 257.3 228 63.6
Haze_02484 Corylus avellana HOM05D005062 ORTHO05D006410 1.0e-65 255.0 241 62.2
EL10Ac7g15813 Beta vulgaris HOM05D005062 ORTHO05D006410 4.2e-64 249.6 413 40.2
Mapoly0046s0115 Marchantia polymorpha HOM05D005062 ORTHO05D006410 5.0e-57 226.1 337 39.8
Duzib128G0173 Durio zibethinus HOM05D005062 ORTHO05D006410 8.5e-57 225.3 235 57.9
SMO347G0520 Selaginella moellendorffii HOM05D005062 ORTHO05D006410 2.5e-56 223.8 325 43.4
AagrBONN_evm.TU.Sc2ySwM_117.1142 Anthoceros agrestis HOM05D005062 ORTHO05D006410 3.0e-54 216.9 252 49.6
AUR62039218 Chenopodium quinoa HOM05D005062 ORTHO05D006410 9.8e-53 211.8 335 40.0
A02p12720 Brassica napus HOM05D005062 ORTHO05D006410 2.0e-50 204.1 223 59.2
Haze_02485 Corylus avellana HOM05D005062 ORTHO05D006410 1.3e-49 201.4 203 54.2
Haze_23392 Corylus avellana HOM05D005062 ORTHO05D006410 1.3e-49 201.4 234 50.0
Pp3c3_30210 Physcomitrium patens HOM05D005062 ORTHO05D006410 2.3e-46 190.7 200 52.5
MD02G1256200 Malus domestica HOM05D005062 ORTHO05D006410 1.7e-44 184.5 126 71.4
Psat6g129720 Pisum sativum HOM05D005062 ORTHO05D006410 6.3e-44 182.6 141 66.0
PRCOL_00003606 Prasinoderma coloniale HOM05D005062 ORTHO05D006410 4.1e-43 179.9 333 37.8
Cre09.g395700 Chlamydomonas reinhardtii HOM05D005062 ORTHO05D006410 1.9e-40 171.0 346 36.7
CBR_g48207 Chara braunii HOM05D000019 ORTHO05D000048 5.2e-38 162.9 237 40.9
QL01p012456 Quercus lobata HOM05D005062 ORTHO05D006410 2.6e-37 160.6 129 60.5
COL.COLO4_24555 Corchorus olitorius HOM05D005062 ORTHO05D006410 2.7e-34 150.6 101 77.2
MCO15G192 Micromonas commoda HOM05D005062 ORTHO05D006410 2.3e-33 147.5 342 30.4
Ciclev10033893m.g Citrus clementina HOM05D005062 ORTHO05D006410 2.5e-32 144.1 103 74.8
FAN06G0036 Fragaria x ananassa HOM05D005062 ORTHO05D006410 2.5e-32 144.1 124 67.7
COL.COLO4_24556 Corchorus olitorius HOM05D005062 ORTHO05D006410 4.7e-31 139.8 84 78.6
Cre06.g250450 Chlamydomonas reinhardtii HOM05D005062 ORTHO05D006410 6.2e-31 139.4 371 29.4
Cfa010034 Carpinus fangiana HOM05D005062 ORTHO05D006410 1.8e-30 137.9 118 55.9
Cre09.g393250 Chlamydomonas reinhardtii HOM05D005062 ORTHO05D006410 4.0e-30 136.7 331 33.5
QL01p012462 Quercus lobata HOM05D005062 ORTHO05D006410 6.8e-30 136.0 145 52.4
Cre12.g521950 Chlamydomonas reinhardtii HOM05D005062 ORTHO05D006410 8.9e-30 135.6 338 30.5
Lj3C928T13 Lonicera japonica HOM05D005062 ORTHO05D006410 3.4e-29 133.7 168 48.2
FAN01G2457 Fragaria x ananassa HOM05D005062 ORTHO05D006410 1.7e-28 131.3 82 85.4
Cre02.g147450 Chlamydomonas reinhardtii HOM05D005062 ORTHO05D006410 2.2e-28 131.0 386 30.3
FAN06G3794 Fragaria x ananassa HOM05D005062 ORTHO05D006410 4.9e-28 129.8 96 69.8
FvH4_7g05870 Fragaria vesca HOM05D005062 ORTHO05D006410 6.4e-28 129.4 117 66.7
Psat6g129760 Pisum sativum HOM05D005062 ORTHO05D006410 4.1e-27 126.7 157 45.9
Ca_00262_v3 Cicer arietinum L. HOM05D005062 ORTHO05D006410 1.5e-24 118.2 159 41.5
ClCG02G008710 Citrullus lanatus HOM05D005062 ORTHO05D006410 1.8e-22 111.3 153 43.1
SEGI_26426 Sequoiadendron giganteum HOM05D005062 ORTHO05D006410 1.2e-21 108.6 73 69.9
GSVIVG01034679001 Vitis vinifera HOM05D005062 ORTHO05D006410 4.4e-21 106.7 73 80.8
BraA02t06329Z Brassica rapa HOM05D005062 ORTHO05D006410 2.2e-20 104.4 80 73.8
Haze_23393 Corylus avellana HOM05D005062 ORTHO05D006410 7.1e-19 99.4 75 65.3
Hma1.2p1_0165F.1_g073310 Hydrangea macrophylla HOM05D005062 ORTHO05D006410 1.2e-18 98.6 66 71.2
Hma1.2p1_1068F.1_g253985 Hydrangea macrophylla HOM05D005062 ORTHO05D006410 1.3e-17 95.1 58 77.6
Dinv42565 Davidia involucrata HOM05D005062 ORTHO05D006410 4.3e-16 90.1 106 52.8
RcHm_v2.0_Chr1g0332551 Rosa chinensis HOM05D005062 ORTHO05D006410 2.1e-15 87.8 59 72.9
Hund18750 Selenicereus undatus HOM05D005062 ORTHO05D006410 4.0e-14 83.6 112 41.1
SEGI_01082 Sequoiadendron giganteum HOM05D005062 ORTHO05D006410 4.0e-14 83.6 59 71.2
FAN01G2288 Fragaria x ananassa HOM05D005062 ORTHO05D006410 1.2e-13 82.0 55 76.4
RcHm_v2.0_Chr1g0332541 Rosa chinensis HOM05D005062 ORTHO05D006410 6.4e-12 76.3 58 65.5
MCO11G881 Micromonas commoda HOM05D005062 ORTHO05D028578 1.0e-09 68.9 413 25.4
DCAR_017587 Daucus carota HOM05D000943 ORTHO05D008314 2.3e-09 67.8 419 26.0
Ca_12794_v3 Cicer arietinum L. HOM05D005062 ORTHO05D006410 3.0e-09 67.4 54 70.4
SEGI_13629 Sequoiadendron giganteum HOM05D005062 ORTHO05D006410 3.9e-09 67.0 67 52.2
HanXRQChr10g0305601 Helianthus annuus HOM05D000943 ORTHO05D008314 3.3e-08 63.9 320 25.0
ECA234G1223 Erigeron canadensis HOM05D005685 ORTHO05D007046 4.3e-08 63.5 294 26.9
MELO3C034937.2 Cucumis melo HOM05D005062 ORTHO05D006410 9.6e-08 62.4 77 46.8
CDE08G0076 Ceratophyllum demersum HOM05D005062 ORTHO05D006410 2.1e-07 61.2 38 73.7
Cre02.g095086 Chlamydomonas reinhardtii HOM05D005062 ORTHO05D028578 9.0e-06 55.8 246 24.4


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