Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.10G047101 Manihot esculenta HOM05D006193 ORTHO05D007808 4.0e-69 264.6 132 100.0
Thecc.10G076000 Theobroma cacao HOM05D006193 ORTHO05D007808 1.0e-56 223.4 133 83.5
Haze_16878 Corylus avellana HOM05D006193 ORTHO05D007808 5.6e-55 217.6 133 80.5
Duzib114G0385 Durio zibethinus HOM05D006193 ORTHO05D007808 1.6e-54 216.1 133 78.9
Cfa001990 Carpinus fangiana HOM05D006193 ORTHO05D007808 8.1e-54 213.8 133 78.9
Gohir.D06G175300 Gossypium hirsutum HOM05D006193 ORTHO05D007808 8.1e-54 213.8 133 78.9
Gorai.010G205700 Gossypium raimondii HOM05D006193 ORTHO05D007808 8.1e-54 213.8 133 78.9
Cfa001656 Carpinus fangiana HOM05D006193 ORTHO05D007808 1.4e-53 213.0 132 80.3
COL.COLO4_28414 Corchorus olitorius HOM05D006193 ORTHO05D007808 1.5e-52 209.5 133 77.4
Gohir.A06G167900 Gossypium hirsutum HOM05D006193 ORTHO05D007808 1.5e-52 209.5 133 77.4
TAR623G1160 Trochodendron aralioides HOM05D006193 ORTHO05D007808 3.4e-52 208.4 130 77.7
Atru.chr12.797 Acer truncatum HOM05D006193 ORTHO05D007808 4.5e-52 208.0 135 80.0
Ciclev10033053m.g Citrus clementina HOM05D006193 ORTHO05D007808 9.9e-52 206.8 135 80.0
Actinidia38857 Actinidia chinensis HOM05D006193 ORTHO05D007808 8.4e-51 203.8 132 77.3
TAR369G0988 Trochodendron aralioides HOM05D006193 ORTHO05D007808 8.4e-51 203.8 129 76.0
Thhalv10026557m.g Eutrema salsugineum HOM05D006193 ORTHO05D007808 3.2e-50 201.8 132 75.8
AL7G42250 Arabidopsis lyrata HOM05D006193 ORTHO05D007808 5.5e-50 201.1 135 74.8
Lsat_1_v5_gn_1_77620 Lactuca sativa HOM05D006193 ORTHO05D007808 5.5e-50 201.1 130 76.9
TWI63G1140 Tripterygium wilfordii HOM05D006193 ORTHO05D007808 7.1e-50 200.7 132 75.8
QL08p055470 Quercus lobata HOM05D006193 ORTHO05D007808 1.2e-49 199.9 131 75.6
ECA248G2014 Erigeron canadensis HOM05D006193 ORTHO05D007808 2.1e-49 199.1 129 75.2
Duzib128G0799 Durio zibethinus HOM05D006193 ORTHO05D007808 3.5e-49 198.4 142 70.4
Carub.0007s2828 Capsella rubella HOM05D006193 ORTHO05D007808 4.6e-49 198.0 133 73.7
Migut.D01650 Erythranthe guttata HOM05D006193 ORTHO05D007808 4.6e-49 198.0 132 75.0
CSS0007064 Camellia sinensis var. sinensis HOM05D006193 ORTHO05D007808 6.0e-49 197.6 139 74.8
HanXRQChr01g0023971 Helianthus annuus HOM05D006193 ORTHO05D007808 6.0e-49 197.6 127 77.2
AT4G14145 Arabidopsis thaliana HOM05D006193 ORTHO05D007808 7.9e-49 197.2 135 73.3
SalBow4G2149 Salvia bowleyana HOM05D006193 ORTHO05D007808 1.0e-48 196.8 116 81.0
Migut.F01979 Erythranthe guttata HOM05D006193 ORTHO05D007808 1.3e-48 196.4 132 75.0
Nn2g10831 Nelumbo nucifera HOM05D006193 ORTHO05D007808 2.3e-48 195.7 128 74.2
RcHm_v2.0_Chr1g0363061 Rosa chinensis HOM05D006193 ORTHO05D007808 2.3e-48 195.7 110 80.9
BcaB04g18121 Brassica carinata HOM05D006193 ORTHO05D007808 3.0e-48 195.3 132 75.0
HanXRQChr08g0229761 Helianthus annuus HOM05D006193 ORTHO05D007808 3.9e-48 194.9 111 82.9
PGR044G2737 Punica granatum HOM05D006193 ORTHO05D007808 3.9e-48 194.9 127 75.6
Prupe.2G212200 Prunus persica HOM05D006193 ORTHO05D007808 6.7e-48 194.1 105 84.8
Sp7g11980 Schrenkiella parvula HOM05D006193 ORTHO05D007808 6.7e-48 194.1 134 73.1
CiPaw.02G173400 Carya illinoinensis HOM05D006193 ORTHO05D007808 8.7e-48 193.7 104 86.5
Potri.010G223700 Populus trichocarpa HOM05D006193 ORTHO05D007808 1.1e-47 193.4 133 73.7
Eucgr.J01081 Eucalyptus grandis HOM05D006193 ORTHO05D007808 2.5e-47 192.2 131 71.8
Sed0026653 Sechium edule HOM05D006193 ORTHO05D007808 2.5e-47 192.2 133 72.9
MSTRG.27474 Avicennia marina HOM05D006193 ORTHO05D007808 3.3e-47 191.8 122 77.9
Sopen03g003450 Solanum pennellii HOM05D006193 ORTHO05D007808 7.4e-47 190.7 131 74.0
THA.LOC104808680 Tarenaya hassleriana HOM05D006193 ORTHO05D007808 7.4e-47 190.7 130 72.3
FvH4_7g19210 Fragaria vesca HOM05D006193 ORTHO05D007808 9.6e-47 190.3 105 83.8
Solyc03g007490.3 Solanum lycopersicum HOM05D006193 ORTHO05D007808 9.6e-47 190.3 131 74.0
Aa31LG9G3240 Aethionema arabicum HOM05D006193 ORTHO05D007808 2.8e-46 188.7 134 71.6
Cc02_g11260 Coffea canephora HOM05D006193 ORTHO05D007808 2.8e-46 188.7 127 74.8
DCAR_016552 Daucus carota HOM05D006193 ORTHO05D007808 4.8e-46 188.0 123 74.8
CAN.G108.21 Capsicum annuum HOM05D006193 ORTHO05D007808 8.2e-46 187.2 129 73.6
Sed0026413 Sechium edule HOM05D006193 ORTHO05D007808 8.2e-46 187.2 131 68.7
TPR.G1973 Trifolium pratense HOM05D006193 ORTHO05D007808 1.4e-45 186.4 129 71.3
FAN10G2131 Fragaria x ananassa HOM05D006509 ORTHO05D008144 1.8e-45 186.0 105 81.9
FAN10G3587 Fragaria x ananassa HOM05D006509 ORTHO05D007808 1.8e-45 186.0 105 81.9
Peaxi162Scf00011g01839 Petunia axillaris HOM05D006193 ORTHO05D007808 2.4e-45 185.7 131 71.8
arahy.Tifrunner.gnm1.ann1.889ECD Arachis hypogaea HOM05D006193 ORTHO05D007808 4.0e-45 184.9 129 72.9
arahy.Tifrunner.gnm1.ann1.4G5N71 Arachis hypogaea HOM05D006193 ORTHO05D007808 5.3e-45 184.5 129 72.1
Lalb_Chr01g0009491 Lupinus albus HOM05D006193 ORTHO05D007808 5.3e-45 184.5 127 72.4
Nitab4.5_0000071g0090 Nicotiana tabacum HOM05D006193 ORTHO05D007808 5.3e-45 184.5 129 74.4
Nitab4.5_0006507g0010 Nicotiana tabacum HOM05D006193 ORTHO05D007808 5.3e-45 184.5 129 72.9
CARHR220160 Cardamine hirsuta HOM05D006193 ORTHO05D007808 6.9e-45 184.1 113 77.9
PGSC0003DMG400009070 Solanum tuberosum HOM05D006193 ORTHO05D007808 9.0e-45 183.7 124 75.0
BolC8t48104H Brassica oleracea HOM05D006193 ORTHO05D007808 1.2e-44 183.3 132 72.7
Aqoxy1G03645 Aquilegia oxysepala HOM05D006193 ORTHO05D007808 1.5e-44 183.0 129 69.8
Peaxi162Scf00370g00117 Petunia axillaris HOM05D006193 ORTHO05D007808 1.5e-44 183.0 131 71.0
BcaC07g37722 Brassica carinata HOM05D006193 ORTHO05D007808 2.0e-44 182.6 130 73.1
BraA08t33036Z Brassica rapa HOM05D006193 ORTHO05D007808 2.0e-44 182.6 130 73.1
Lj5g0007819 Lotus japonicus HOM05D006193 ORTHO05D007808 2.0e-44 182.6 104 82.7
CANSAT54G0886 Cannabis sativa HOM05D006193 ORTHO05D007808 2.6e-44 182.2 134 70.1
MD01G1107500 Malus domestica HOM05D006193 ORTHO05D007808 2.6e-44 182.2 116 74.1
PSO832G3015 Papaver somniferum HOM05D006193 ORTHO05D007808 2.6e-44 182.2 128 68.0
SGA_v2.0_scaffold355G49780 Striga asiatica HOM05D006193 ORTHO05D007808 2.6e-44 182.2 131 66.4
Oeu014384.2 Olea europaea HOM05D006193 ORTHO05D007808 3.4e-44 181.8 159 61.0
A08p24240 Brassica napus HOM05D006193 ORTHO05D007808 5.8e-44 181.0 125 72.0
CiPaw.16G031600 Carya illinoinensis HOM05D006193 ORTHO05D007808 5.8e-44 181.0 119 76.5
A08p10360 Brassica napus HOM05D006193 ORTHO05D007808 1.0e-43 180.3 130 71.5
MBI07_g44648_MAGBIO Magnolia biondii HOM05D006193 ORTHO05D007808 1.3e-43 179.9 114 74.6
ATR0329G030 Amborella trichopoda HOM05D006193 ORTHO05D007808 1.7e-43 179.5 113 73.5
PSO210G4078 Papaver somniferum HOM05D006193 ORTHO05D007808 1.7e-43 179.5 113 73.5
Os03g0288400 Oryza sativa ssp. japonica HOM05D006193 ORTHO05D007808 2.2e-43 179.1 108 76.9
ClCG05G021080 Citrullus lanatus HOM05D006193 ORTHO05D007808 4.9e-43 177.9 161 58.4
Glyma.20G180500 Glycine max HOM05D006193 ORTHO05D007808 1.1e-42 176.8 127 70.9
Phvul.007G095900 Phaseolus vulgaris HOM05D006193 ORTHO05D007808 1.1e-42 176.8 127 70.1
Glyma.10G210100 Glycine max HOM05D006193 ORTHO05D007808 2.5e-42 175.6 103 79.6
VMungo0720G0734 Vigna mungo HOM05D006193 ORTHO05D007808 2.5e-42 175.6 127 69.3
BraA08t34379Z Brassica rapa HOM05D006193 ORTHO05D007808 5.5e-42 174.5 124 70.2
Hund05693 Selenicereus undatus HOM05D006193 ORTHO05D007808 7.1e-42 174.1 105 79.0
SGA_v2.0_scaffold250G44987 Striga asiatica HOM05D006193 ORTHO05D007808 9.3e-42 173.7 129 65.1
BcaC01g00219 Brassica carinata HOM05D006193 ORTHO05D007808 1.6e-41 172.9 132 68.2
Sabra10G0173000 Salix brachista HOM05D006193 ORTHO05D007808 1.6e-41 172.9 172 56.4
Oeu042739.1 Olea europaea HOM05D006193 ORTHO05D007808 2.1e-41 172.6 137 65.0
GSVIVG01016260001 Vitis vinifera HOM05D006193 ORTHO05D007808 2.7e-41 172.2 122 64.8
CDE03G0070 Ceratophyllum demersum HOM05D006193 ORTHO05D007808 4.6e-41 171.4 120 65.8
FAN03G1544 Fragaria x ananassa HOM05D006193 ORTHO05D007808 7.9e-41 170.6 97 80.4
unitig_37.g12308 Utricularia gibba HOM05D006193 ORTHO05D007808 1.8e-40 169.5 129 65.1
SGA_v2.0_scaffold24G10658 Striga asiatica HOM05D006193 ORTHO05D007808 2.3e-40 169.1 126 65.1
MELO3C012421.2 Cucumis melo HOM05D006193 ORTHO05D007808 1.1e-39 166.8 163 53.4
Rhsim03G0119300 Rhododendron simsii HOM05D006193 ORTHO05D007808 1.1e-39 166.8 204 49.0
HPP92_011207 Vanilla planifolia HOM05D006193 ORTHO05D007808 1.9e-39 166.0 108 71.3
Zm00001eb062340 Zea mays HOM05D006193 ORTHO05D007808 1.9e-39 166.0 99 76.8
Sc20g0001780 Simmondsia chinensis HOM05D006193 ORTHO05D007808 4.8e-38 161.4 134 61.9
Aqoxy1G03181 Aquilegia oxysepala HOM05D006193 ORTHO05D007808 3.4e-36 155.2 108 70.4
arahy.Tifrunner.gnm1.ann1.D81QGL Arachis hypogaea HOM05D006193 ORTHO05D007808 1.1e-34 150.2 106 71.7
arahy.Tifrunner.gnm1.ann1.N5AHK9 Arachis hypogaea HOM05D006193 ORTHO05D007808 1.4e-34 149.8 106 71.7
Psat6g182760 Pisum sativum HOM05D006193 ORTHO05D007808 5.5e-34 147.9 106 68.9
Ca_10561_v3 Cicer arietinum L. HOM05D006193 ORTHO05D007808 3.0e-32 142.1 84 81.0
EL10Ac7g18239 Beta vulgaris HOM05D006193 ORTHO05D007808 5.7e-31 137.9 130 56.2
FAN19G2294 Fragaria x ananassa HOM05D006193 ORTHO05D007808 3.7e-30 135.2 85 77.6
AUR62001381 Chenopodium quinoa HOM05D006193 ORTHO05D007808 6.9e-29 131.0 92 70.7
Ah.08g217480 Amaranthus hybridus HOM05D006193 ORTHO05D007808 3.4e-28 128.6 103 61.2
Mapoly0038s0090 Marchantia polymorpha HOM05D006193 ORTHO05D007808 3.2e-26 122.1 106 53.8
vmacro07063 Vaccinium macrocarpon HOM05D006193 ORTHO05D007808 3.2e-26 122.1 65 90.8
MBI07_g30981_MAGBIO Magnolia biondii HOM05D006193 ORTHO05D007808 1.8e-24 116.3 110 56.4
Medtr1g094840 Medicago truncatula HOM05D006193 ORTHO05D007808 2.3e-24 115.9 71 76.1
FAN06G3393 Fragaria x ananassa HOM05D006193 ORTHO05D007808 4.4e-23 111.7 66 78.8
CsaV3_5G036210 Cucumis sativus L. HOM05D006193 ORTHO05D007808 7.4e-23 110.9 67 79.1
BolC3t19959H Brassica oleracea HOM05D006193 ORTHO05D007808 6.3e-22 107.8 82 69.5
Lsat_1_v5_gn_2_8120 Lactuca sativa HOM05D006193 ORTHO05D007808 1.2e-20 103.6 87 58.6
AagrBONN_evm.TU.Sc2ySwM_228.264 Anthoceros agrestis HOM05D006193 ORTHO05D007808 5.5e-18 94.7 107 43.0
SMO232G0066 Selaginella moellendorffii HOM05D006193 ORTHO05D007808 2.1e-17 92.8 98 40.8
EL10Ac7g17093 Beta vulgaris HOM05D006193 ORTHO05D007808 1.0e-16 90.5 66 69.7
Nitab4.5_0005501g0010 Nicotiana tabacum HOM05D006193 ORTHO05D007808 1.8e-16 89.7 109 48.6
Pp3c5_20880 Physcomitrium patens HOM05D006193 ORTHO05D007808 3.9e-16 88.6 103 45.6
SMO241G0021 Selaginella moellendorffii HOM05D006193 ORTHO05D007808 5.7e-15 84.7 90 38.9
vmacro07064 Vaccinium macrocarpon HOM05D006193 ORTHO05D007808 3.7e-14 82.0 63 63.5
Potri.008G038500 Populus trichocarpa HOM05D006193 ORTHO05D007808 4.8e-14 81.6 57 68.4
CSS0043670 Camellia sinensis var. sinensis HOM05D006193 ORTHO05D007808 1.0e-08 63.9 68 54.4
Medtr1g094845 Medicago truncatula HOM05D006193 ORTHO05D007808 6.3e-06 54.7 51 51.0


User provided reference genes

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