Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.10G043900 Manihot esculenta HOM05D010162 ORTHO05D010383 3.1e-102 375.2 195 100.0
Manes.10G044000 Manihot esculenta HOM05D010162 ORTHO05D010383 2.4e-94 349.0 195 93.3
Manes.10G044100 Manihot esculenta HOM05D010162 ORTHO05D010383 3.2e-83 312.0 203 83.3
Manes.10G043800 Manihot esculenta HOM05D010162 ORTHO05D010383 3.1e-70 268.9 196 75.0
Duzib128G1476 Durio zibethinus HOM05D010162 ORTHO05D010383 1.3e-18 97.4 206 39.8
Thecc.10G069600 Theobroma cacao HOM05D010162 ORTHO05D010383 1.3e-18 97.4 210 41.4
Prupe.2G217100 Prunus persica HOM05D010935 ORTHO05D010383 3.7e-18 95.9 199 39.2
QL08p056651 Quercus lobata HOM05D000336 ORTHO05D002705 1.7e-15 87.0 221 35.7
Duzib114G0652 Durio zibethinus HOM05D010162 ORTHO05D010383 3.8e-15 85.9 191 40.3
MD07G1177700 Malus domestica HOM05D010935 ORTHO05D010383 3.8e-15 85.9 202 35.6
CiPaw.01G275300 Carya illinoinensis HOM05D010935 ORTHO05D010383 4.9e-15 85.5 206 36.4
MD01G1111500 Malus domestica HOM05D010935 ORTHO05D010383 1.1e-14 84.3 200 36.0
TAR383G0288 Trochodendron aralioides HOM05D003020 ORTHO05D003226 1.1e-14 84.3 206 35.4
Cfa001603 Carpinus fangiana HOM05D010935 ORTHO05D010383 9.3e-14 81.3 176 39.8
Dinv11798 Davidia involucrata HOM05D003020 ORTHO05D003226 7.9e-13 78.2 213 32.9
TAR626G0085 Trochodendron aralioides HOM05D003020 ORTHO05D003226 2.3e-12 76.6 234 32.1
Gohir.A13G024800 Gossypium hirsutum HOM05D010162 ORTHO05D010383 3.0e-12 76.3 210 34.3
COL.COLO4_23723 Corchorus olitorius HOM05D010162 ORTHO05D010383 5.1e-12 75.5 215 35.3
RcHm_v2.0_Chr1g0363961 Rosa chinensis HOM05D010935 ORTHO05D010383 8.7e-12 74.7 185 35.7
Gohir.D13G023650 Gossypium hirsutum HOM05D010162 ORTHO05D010383 1.1e-11 74.3 210 34.3
Gohir.D01G117600 Gossypium hirsutum HOM05D010162 ORTHO05D010383 1.5e-11 73.9 211 35.1
TAR383G0645 Trochodendron aralioides HOM05D003020 ORTHO05D003226 1.5e-11 73.9 245 31.0
FAN10G0666 Fragaria x ananassa HOM05D010935 ORTHO05D010383 4.3e-11 72.4 185 35.7
Gorai.002G143100 Gossypium raimondii HOM05D010162 ORTHO05D010383 4.3e-11 72.4 207 33.8
TAR626G1849 Trochodendron aralioides HOM05D003020 ORTHO05D003226 7.4e-11 71.6 235 29.8
Gorai.013G026500 Gossypium raimondii HOM05D010162 ORTHO05D010383 9.6e-11 71.2 212 32.1
TAR383G0698 Trochodendron aralioides HOM05D003020 ORTHO05D003226 1.3e-10 70.9 241 28.6
Dinv11796 Davidia involucrata HOM05D000336 ORTHO05D002705 1.6e-10 70.5 230 32.2
TAR383G0860 Trochodendron aralioides HOM05D003020 ORTHO05D003226 1.6e-10 70.5 237 30.8
Gorai.013G026600 Gossypium raimondii HOM05D010162 ORTHO05D010383 4.8e-10 68.9 213 33.8
Eucgr.J01119 Eucalyptus grandis HOM05D003020 ORTHO05D003226 1.1e-09 67.8 205 32.7
FAN06G0306 Fragaria x ananassa HOM05D010935 ORTHO05D010383 1.1e-09 67.8 185 35.7
FAN03G3034 Fragaria x ananassa HOM05D010935 ORTHO05D010383 1.4e-09 67.4 185 35.7
Manes.10G043400 Manihot esculenta HOM05D010935 ORTHO05D010383 2.4e-09 66.6 201 32.8
Lj1C921T2 Lonicera japonica HOM05D003020 ORTHO05D003226 3.1e-09 66.2 184 32.1
CsaV3_5G025880 Cucumis sativus L. HOM05D040659 ORTHO05D010383 5.3e-09 65.5 203 31.0
Dinv31354 Davidia involucrata HOM05D003020 ORTHO05D003226 5.3e-09 65.5 199 31.7
FvH4_7g20010 Fragaria vesca HOM05D010935 ORTHO05D010383 5.3e-09 65.5 185 35.1
Eucgr.G02810 Eucalyptus grandis HOM05D010935 ORTHO05D010383 6.9e-09 65.1 205 31.2
TAR625G0330 Trochodendron aralioides HOM05D003020 ORTHO05D003226 6.9e-09 65.1 240 29.6
MELO3C002880.2 Cucumis melo HOM05D040659 ORTHO05D010383 9.0e-09 64.7 201 32.3
FAN01G2770 Fragaria x ananassa HOM05D010935 ORTHO05D010383 9.0e-09 64.7 172 34.9
Potri.008G042900 Populus trichocarpa HOM05D010162 ORTHO05D010383 9.0e-09 64.7 211 31.8
Potri.010G219300 Populus trichocarpa HOM05D010162 ORTHO05D010383 9.0e-09 64.7 162 40.1
Gohir.A13G024900 Gossypium hirsutum HOM05D010162 ORTHO05D010383 1.5e-08 63.9 209 34.0
Duzib168G2116 Durio zibethinus HOM05D003020 ORTHO05D003226 2.6e-08 63.2 230 31.7
Thecc.09G173200 Theobroma cacao HOM05D003020 ORTHO05D003226 5.8e-08 62.0 231 29.9
TPR.G21624 Trifolium pratense HOM05D009308 ORTHO05D011513 7.6e-08 61.6 154 32.5
Gohir.D13G023700 Gossypium hirsutum HOM05D010162 ORTHO05D010383 1.0e-07 61.2 199 31.7
Dinv41250 Davidia involucrata HOM05D003020 ORTHO05D003226 1.7e-07 60.5 229 26.6
Hma1.2p1_0453F.1_g156030 Hydrangea macrophylla HOM05D003020 ORTHO05D003226 2.9e-07 59.7 191 33.0
Lj1P920T18 Lonicera japonica HOM05D003020 ORTHO05D003226 2.9e-07 59.7 171 31.6
Prupe.2G217000 Prunus persica HOM05D010935 ORTHO05D010383 2.9e-07 59.7 200 33.0
Duzib170G0355 Durio zibethinus HOM05D003020 ORTHO05D003226 3.8e-07 59.3 223 31.4
COL.COLO4_35897 Corchorus olitorius HOM05D003020 ORTHO05D003226 4.9e-07 58.9 233 32.2
Peaxi162Scf00851g00012 Petunia axillaris HOM05D012114 ORTHO05D014153 4.9e-07 58.9 215 30.7
Dinv31353 Davidia involucrata HOM05D003020 ORTHO05D003226 6.5e-07 58.5 181 33.1
Gohir.D13G023750 Gossypium hirsutum HOM05D010162 ORTHO05D010383 6.5e-07 58.5 222 31.1
Nitab4.5_0021955g0010 Nicotiana tabacum HOM05D011460 ORTHO05D010383 6.5e-07 58.5 172 30.2
Actinidia04141 Actinidia chinensis HOM05D003020 ORTHO05D003226 8.4e-07 58.2 211 28.0
Oeu026427.1 Olea europaea HOM05D011460 ORTHO05D010383 8.4e-07 58.2 231 31.6
ClCG09G020520 Citrullus lanatus HOM05D040659 ORTHO05D010383 1.4e-06 57.4 211 33.6
Cfa013505 Carpinus fangiana HOM05D003020 ORTHO05D003226 1.9e-06 57.0 223 30.5
Duzib150G1089 Durio zibethinus HOM05D003020 ORTHO05D003226 1.9e-06 57.0 221 31.7
FvH4_7g20000 Fragaria vesca HOM05D010935 ORTHO05D010383 1.9e-06 57.0 212 33.0
Gohir.D13G023725 Gossypium hirsutum HOM05D010162 ORTHO05D010383 1.9e-06 57.0 222 30.6
Haze_22098 Corylus avellana HOM05D003020 ORTHO05D003226 2.5e-06 56.6 229 29.7
MD07G1177600 Malus domestica HOM05D010935 ORTHO05D010383 2.5e-06 56.6 205 29.8
SalBow4G1965 Salvia bowleyana HOM05D003020 ORTHO05D003226 2.5e-06 56.6 241 29.0
Atru.chr12.703 Acer truncatum HOM05D043902 ORTHO05D010383 3.2e-06 56.2 153 33.3
FAN03G0405 Fragaria x ananassa HOM05D010935 ORTHO05D010383 3.2e-06 56.2 212 33.0
Gorai.013G026700 Gossypium raimondii HOM05D010162 ORTHO05D010383 4.2e-06 55.8 222 30.6
Nn2g12774 Nelumbo nucifera HOM05D003020 ORTHO05D003226 4.2e-06 55.8 238 29.0
TWI38G1817 Tripterygium wilfordii HOM05D003020 ORTHO05D003226 4.2e-06 55.8 194 32.0
CiPaw.02G176000 Carya illinoinensis HOM05D003020 ORTHO05D003226 5.5e-06 55.5 238 29.4
CiPaw.07G071600 Carya illinoinensis HOM05D003020 ORTHO05D003226 5.5e-06 55.5 240 29.6
Haze_16927 Corylus avellana HOM05D003020 ORTHO05D003226 5.5e-06 55.5 234 28.2
Cpa.g.sc53.28 Carica papaya HOM05D003020 ORTHO05D003226 7.1e-06 55.1 232 29.7
Gorai.004G031500 Gossypium raimondii HOM05D003020 ORTHO05D003226 7.1e-06 55.1 212 29.7
Atru.chr12.713 Acer truncatum HOM05D043902 ORTHO05D010383 9.3e-06 54.7 153 32.7
DCAR_006457 Daucus carota HOM05D011460 ORTHO05D010383 9.3e-06 54.7 163 31.3
Eucgr.J01114 Eucalyptus grandis HOM05D003020 ORTHO05D003226 9.3e-06 54.7 238 28.6
Psat1g081520 Pisum sativum HOM05D009308 ORTHO05D011513 9.3e-06 54.7 167 29.3


User provided reference genes

Program Settings