Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.10G042300 Manihot esculenta HOM05D006911 ORTHO05D006663 5.9e-35 150.2 71 100.0
Manes.07G101802 Manihot esculenta HOM05D006911 ORTHO05D006663 2.1e-19 98.6 72 68.1
Thecc.01G170800 Theobroma cacao HOM05D006911 ORTHO05D006663 8.1e-16 86.7 68 57.4
Potri.005G203800 Populus trichocarpa HOM05D006911 ORTHO05D006663 1.2e-14 82.8 69 63.8
COL.COLO4_07174 Corchorus olitorius HOM05D006911 ORTHO05D006663 7.5e-14 80.1 64 57.8
Duzib133G0070 Durio zibethinus HOM05D006911 ORTHO05D006663 9.9e-14 79.7 68 54.4
Nn3g20669 Nelumbo nucifera HOM05D006911 ORTHO05D006663 6.0e-11 70.5 72 48.6
Cfa023065 Carpinus fangiana HOM05D006911 ORTHO05D006663 7.8e-11 70.1 71 52.1
Haze_13522 Corylus avellana HOM05D006911 ORTHO05D006663 7.8e-11 70.1 71 52.1
Gohir.A11G156500 Gossypium hirsutum HOM05D006911 ORTHO05D006663 1.0e-10 69.7 67 53.7
Gohir.D11G163600 Gossypium hirsutum HOM05D006911 ORTHO05D006663 2.3e-10 68.6 67 52.2
Gorai.007G174300 Gossypium raimondii HOM05D006911 ORTHO05D006663 2.3e-10 68.6 67 52.2
Potri.002G058400 Populus trichocarpa HOM05D006911 ORTHO05D006663 2.3e-10 68.6 69 55.1
CiPaw.04G139200 Carya illinoinensis HOM05D006911 ORTHO05D006663 2.5e-09 65.1 66 47.0
Nn4g26517 Nelumbo nucifera HOM05D006911 ORTHO05D006663 2.5e-09 65.1 54 55.6
Glyma.14G029400 Glycine max HOM05D006911 ORTHO05D006663 3.3e-09 64.7 57 54.4
LjContig00049g0014504 Lotus japonicus HOM05D006911 ORTHO05D006663 4.3e-09 64.3 57 52.6
Cpa.g.sc50.102 Carica papaya HOM05D006911 ORTHO05D006663 9.5e-09 63.2 71 47.9
COL.COLO4_24713 Corchorus olitorius HOM05D006911 ORTHO05D006663 9.5e-09 63.2 68 44.1
Medtr5g091310 Medicago truncatula HOM05D006911 ORTHO05D006663 1.2e-08 62.8 58 56.9
Prupe.3G175200 Prunus persica HOM05D006911 ORTHO05D006663 1.2e-08 62.8 56 53.6
FvH4_6g38520 Fragaria vesca HOM05D006911 ORTHO05D006663 1.6e-08 62.4 56 50.0
FAN02G1638 Fragaria x ananassa HOM05D006911 ORTHO05D006663 1.6e-08 62.4 56 50.0
FAN14G5866 Fragaria x ananassa HOM05D006911 ORTHO05D006663 1.6e-08 62.4 56 50.0
THA.LOC104800829 Tarenaya hassleriana HOM05D006911 ORTHO05D006663 1.6e-08 62.4 52 63.5
Ciclev10033778m.g Citrus clementina HOM05D006911 ORTHO05D006663 2.1e-08 62.0 76 46.1
RcHm_v2.0_Chr2g0151771 Rosa chinensis HOM05D006911 ORTHO05D006663 2.8e-08 61.6 50 56.0
MD17G1137200 Malus domestica HOM05D006911 ORTHO05D006663 3.6e-08 61.2 56 50.0
MBI10_g27413_MAGBIO Magnolia biondii HOM05D006911 ORTHO05D006663 6.2e-08 60.5 71 38.0
MD09G1150000 Malus domestica HOM05D006911 ORTHO05D006663 6.2e-08 60.5 56 46.4
QL08p044828 Quercus lobata HOM05D006911 ORTHO05D006663 6.2e-08 60.5 68 45.6
Thecc.06G153400 Theobroma cacao HOM05D006911 ORTHO05D006663 1.1e-07 59.7 60 43.3
CSS0014266 Camellia sinensis var. sinensis HOM05D006911 ORTHO05D006663 1.4e-07 59.3 60 50.0
CSS0033096 Camellia sinensis var. sinensis HOM05D006911 ORTHO05D006663 1.4e-07 59.3 60 50.0
QL05p059038 Quercus lobata HOM05D006911 ORTHO05D006663 1.8e-07 58.9 53 49.1
arahy.Tifrunner.gnm1.ann1.A53T08 Arachis hypogaea HOM05D006911 ORTHO05D006663 3.1e-07 58.2 43 60.5
Potri.004G131200 Populus trichocarpa HOM05D006911 ORTHO05D006663 3.1e-07 58.2 58 44.8
arahy.Tifrunner.gnm1.ann1.M9VZ51 Arachis hypogaea HOM05D006911 ORTHO05D006663 4.0e-07 57.8 43 60.5
Potri.011G079900 Populus trichocarpa HOM05D006911 ORTHO05D006663 4.0e-07 57.8 58 48.3
COL.COLO4_38300 Corchorus olitorius HOM05D006911 ORTHO05D006663 1.5e-06 55.8 56 44.6
TWI14G1424 Tripterygium wilfordii HOM05D006911 ORTHO05D006663 2.0e-06 55.5 62 48.4
Gohir.A05G149800 Gossypium hirsutum HOM05D006911 ORTHO05D006663 2.6e-06 55.1 58 43.1
Phvul.008G193200 Phaseolus vulgaris HOM05D006911 ORTHO05D006663 4.4e-06 54.3 57 47.4
Sp1g05240 Schrenkiella parvula HOM05D006911 ORTHO05D006663 4.4e-06 54.3 46 60.9
C05p04730 Brassica napus HOM05D006911 ORTHO05D006663 5.8e-06 53.9 46 56.5
BolC5t29245H Brassica oleracea HOM05D006911 ORTHO05D006663 5.8e-06 53.9 46 56.5
Gohir.D05G152400 Gossypium hirsutum HOM05D006911 ORTHO05D006663 5.8e-06 53.9 56 42.9
Gohir.A10G039300 Gossypium hirsutum HOM05D006911 ORTHO05D006663 9.9e-06 53.1 63 42.9


User provided reference genes

Program Settings