Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.10G039600 Manihot esculenta HOM05D007397 ORTHO05D009336 6.9e-70 267.7 191 100.0
Sabra08G0033900 Salix brachista HOM05D007397 ORTHO05D009336 4.2e-43 178.7 199 59.8
Potri.008G047800 Populus trichocarpa HOM05D007397 ORTHO05D009336 2.3e-41 172.9 202 59.9
TWI38G1005 Tripterygium wilfordii HOM05D007397 ORTHO05D009336 3.0e-41 172.6 189 55.6
Potri.010G213600 Populus trichocarpa HOM05D007397 ORTHO05D009336 1.1e-40 170.6 189 60.3
CSS0023256 Camellia sinensis var. sinensis HOM05D007397 ORTHO05D009336 1.8e-38 163.3 189 52.9
Cpa.g.sc1.304 Carica papaya HOM05D007397 ORTHO05D009336 6.9e-38 161.4 181 54.1
Gorai.011G244600 Gossypium raimondii HOM05D007397 ORTHO05D009336 6.9e-38 161.4 196 60.2
Ciclev10034008m.g Citrus clementina HOM05D007397 ORTHO05D009336 2.0e-37 159.8 95 83.2
Thecc.10G062300 Theobroma cacao HOM05D007397 ORTHO05D009336 2.0e-37 159.8 197 59.9
Glyma.04G095200 Glycine max HOM05D007397 ORTHO05D009336 4.5e-37 158.7 93 81.7
Prupe.2G224700 Prunus persica HOM05D007397 ORTHO05D009336 5.9e-37 158.3 192 63.0
PGR142G1402 Punica granatum HOM05D007397 ORTHO05D009336 7.7e-37 157.9 197 58.4
QL08p057549 Quercus lobata HOM05D007397 ORTHO05D009336 7.7e-37 157.9 192 69.3
Haze_16973 Corylus avellana HOM05D007397 ORTHO05D009336 1.0e-36 157.5 93 81.7
MD07G1184800 Malus domestica HOM05D007397 ORTHO05D009336 1.0e-36 157.5 95 80.0
Gohir.A10G209700 Gossypium hirsutum HOM05D007397 ORTHO05D009336 1.3e-36 157.1 196 62.8
Glyma.06G097000 Glycine max HOM05D007397 ORTHO05D009336 3.8e-36 155.6 93 79.6
GSVIVG01032626001 Vitis vinifera HOM05D007397 ORTHO05D009336 6.5e-36 154.8 96 79.2
Cfa001558 Carpinus fangiana HOM05D007397 ORTHO05D009336 8.5e-36 154.5 192 51.6
ClCG09G020320 Citrullus lanatus HOM05D007397 ORTHO05D009336 8.5e-36 154.5 87 87.4
Gohir.D10G218000 Gossypium hirsutum HOM05D007397 ORTHO05D009336 8.5e-36 154.5 196 51.5
CiPaw.01G279900 Carya illinoinensis HOM05D007397 ORTHO05D009336 4.2e-35 152.1 96 76.0
Atru.chr12.591 Acer truncatum HOM05D007397 ORTHO05D009336 5.5e-35 151.8 88 80.7
Lj5g0010768 Lotus japonicus HOM05D007397 ORTHO05D009336 5.5e-35 151.8 93 78.5
Duzib106G0993 Durio zibethinus HOM05D007397 ORTHO05D009336 1.2e-34 150.6 92 79.3
Hma1.2p1_0348F.1_g131665 Hydrangea macrophylla HOM05D007397 ORTHO05D009336 1.2e-34 150.6 193 53.4
Hma1.2p1_0348F.1_g131670 Hydrangea macrophylla HOM05D007397 ORTHO05D009336 1.2e-34 150.6 193 53.4
Aa31sc153G60 Aethionema arabicum HOM05D007397 ORTHO05D009336 1.6e-34 150.2 89 82.0
Oeu044824.1 Olea europaea HOM05D007397 ORTHO05D009336 1.6e-34 150.2 192 51.6
VMungo1309G1572 Vigna mungo HOM05D007397 ORTHO05D009336 2.1e-34 149.8 93 77.4
Ca_11323_v3 Cicer arietinum L. HOM05D007397 ORTHO05D009336 3.6e-34 149.1 91 78.0
Medtr1g115740 Medicago truncatula HOM05D007397 ORTHO05D009336 3.6e-34 149.1 96 74.0
Cc02_g08640 Coffea canephora HOM05D007397 ORTHO05D009336 4.6e-34 148.7 93 79.6
Phvul.009G036400 Phaseolus vulgaris HOM05D007397 ORTHO05D009336 6.1e-34 148.3 92 76.1
MELO3C025487.2 Cucumis melo HOM05D007397 ORTHO05D009336 7.9e-34 147.9 87 82.8
FAN01G1537 Fragaria x ananassa HOM05D007397 ORTHO05D009336 7.9e-34 147.9 97 74.2
CAN.G1557.1 Capsicum annuum HOM05D007397 ORTHO05D009336 1.0e-33 147.5 88 80.7
FAN01G1406 Fragaria x ananassa HOM05D007397 ORTHO05D009336 1.0e-33 147.5 96 74.0
SGA_v2.0_scaffold165G38243 Striga asiatica HOM05D007397 ORTHO05D009336 1.0e-33 147.5 89 80.9
MSTRG.7898 Avicennia marina HOM05D007397 ORTHO05D009336 1.8e-33 146.7 187 52.9
SalBow2G2387 Salvia bowleyana HOM05D007397 ORTHO05D009336 1.8e-33 146.7 89 79.8
CANSAT64G2695 Cannabis sativa HOM05D007397 ORTHO05D009336 5.1e-33 145.2 193 48.7
COL.COLO4_37769 Corchorus olitorius HOM05D007397 ORTHO05D009336 5.1e-33 145.2 193 65.3
Sc06g0001870 Simmondsia chinensis HOM05D007397 ORTHO05D009336 5.1e-33 145.2 159 52.8
TPR.G10388 Trifolium pratense HOM05D007397 ORTHO05D009336 6.7e-33 144.8 90 75.6
RcHm_v2.0_Chr1g0365021 Rosa chinensis HOM05D007397 ORTHO05D009336 8.8e-33 144.4 97 74.2
THA.LOC104809886 Tarenaya hassleriana HOM05D007397 ORTHO05D009336 1.5e-32 143.7 89 79.8
FAN03G3257 Fragaria x ananassa HOM05D007397 ORTHO05D009336 2.0e-32 143.3 195 47.7
THA.LOC104827311 Tarenaya hassleriana HOM05D007397 ORTHO05D009336 2.6e-32 142.9 89 80.9
AL3G23990 Arabidopsis lyrata HOM05D007397 ORTHO05D009336 3.3e-32 142.5 89 76.4
Carub.0003s1170 Capsella rubella HOM05D007397 ORTHO05D009336 4.4e-32 142.1 180 48.9
Rhsim09G0155900 Rhododendron simsii HOM05D007397 ORTHO05D009336 4.4e-32 142.1 180 46.7
Sopen04g005370 Solanum pennellii HOM05D007397 ORTHO05D009336 4.4e-32 142.1 194 51.0
Solyc04g010190.1 Solanum lycopersicum HOM05D007397 ORTHO05D009336 5.7e-32 141.7 192 52.1
PGSC0003DMG400011470 Solanum tuberosum HOM05D007397 ORTHO05D009336 5.7e-32 141.7 192 47.4
Nn2g12828 Nelumbo nucifera HOM05D007397 ORTHO05D009336 7.4e-32 141.4 195 51.8
Psat6g239080 Pisum sativum HOM05D007397 ORTHO05D009336 7.4e-32 141.4 91 71.4
Nitab4.5_0007221g0040 Nicotiana tabacum HOM05D007397 ORTHO05D009336 9.7e-32 141.0 193 61.7
Migut.L01413 Erythranthe guttata HOM05D007397 ORTHO05D009336 1.3e-31 140.6 89 74.2
Lalb_Chr06g0164111 Lupinus albus HOM05D007397 ORTHO05D009336 1.3e-31 140.6 90 76.7
EL10Ac2g03499 Beta vulgaris HOM05D007397 ORTHO05D009336 1.7e-31 140.2 92 73.9
CARHR086880 Cardamine hirsuta HOM05D007397 ORTHO05D009336 1.7e-31 140.2 174 47.1
AT3G12345 Arabidopsis thaliana HOM05D007397 ORTHO05D009336 2.2e-31 139.8 89 75.3
AUR62042666 Chenopodium quinoa HOM05D007397 ORTHO05D009336 2.2e-31 139.8 179 45.3
unitig_22.g6935 Utricularia gibba HOM05D007397 ORTHO05D009336 2.2e-31 139.8 92 78.3
PSO384G5114 Papaver somniferum HOM05D007397 ORTHO05D009336 2.8e-31 139.4 87 74.7
Thhalv10021616m.g Eutrema salsugineum HOM05D007397 ORTHO05D009336 4.8e-31 138.7 89 74.2
PSO339G5749 Papaver somniferum HOM05D007397 ORTHO05D009336 6.3e-31 138.3 87 73.6
Peaxi162Scf00135g00025 Petunia axillaris HOM05D007397 ORTHO05D009336 1.1e-30 137.5 89 76.4
Sp3g10540 Schrenkiella parvula HOM05D007397 ORTHO05D009336 1.4e-30 137.1 179 46.9
Sed0011140 Sechium edule HOM05D007397 ORTHO05D009336 1.4e-30 137.1 87 74.7
TAR320G0002 Trochodendron aralioides HOM05D007397 ORTHO05D009336 1.8e-30 136.7 90 70.0
Aqoxy5G01687 Aquilegia oxysepala HOM05D007397 ORTHO05D009336 2.4e-30 136.3 91 72.5
CsaV3_5G026110 Cucumis sativus L. HOM05D007397 ORTHO05D009336 5.3e-30 135.2 82 81.7
HanXRQChr14g0460741 Helianthus annuus HOM05D007397 ORTHO05D009336 6.9e-30 134.8 87 74.7
Lj1P929T40 Lonicera japonica HOM05D007397 ORTHO05D009336 9.1e-30 134.4 94 67.0
BcaC05g29269 Brassica carinata HOM05D007397 ORTHO05D009336 2.0e-29 133.3 170 46.5
A05p37050 Brassica napus HOM05D007397 ORTHO05D009336 2.6e-29 132.9 175 45.7
C05p55480 Brassica napus HOM05D007397 ORTHO05D009336 2.6e-29 132.9 171 46.2
BolC5t34214H Brassica oleracea HOM05D007397 ORTHO05D009336 2.6e-29 132.9 171 46.2
MBI05_g30757_MAGBIO Magnolia biondii HOM05D007397 ORTHO05D009336 2.6e-29 132.9 93 65.6
MBI05_g32638_MAGBIO Magnolia biondii HOM05D007397 ORTHO05D009336 2.6e-29 132.9 93 65.6
Actinidia38224 Actinidia chinensis HOM05D007397 ORTHO05D009336 5.9e-29 131.7 83 74.7
BcaB04g21083 Brassica carinata HOM05D007397 ORTHO05D009336 7.7e-29 131.3 89 68.5
BcaB04g21085 Brassica carinata HOM05D007397 ORTHO05D009336 7.7e-29 131.3 89 68.5
DCAR_015250 Daucus carota HOM05D007397 ORTHO05D009336 1.0e-28 131.0 89 69.7
BraA05t22502Z Brassica rapa HOM05D007397 ORTHO05D009336 1.3e-28 130.6 174 44.8
Dinv25942 Davidia involucrata HOM05D007397 ORTHO05D009336 3.8e-28 129.0 175 47.4
FAN10G1155 Fragaria x ananassa HOM05D007397 ORTHO05D009336 5.5e-27 125.2 78 75.6
ATR0681G332 Amborella trichopoda HOM05D007397 ORTHO05D009336 7.2e-27 124.8 89 62.9
Lsat_1_v5_gn_2_115220 Lactuca sativa HOM05D005234 ORTHO05D006583 2.7e-26 122.9 80 75.0
SEGI_38306 Sequoiadendron giganteum HOM05D007397 ORTHO05D009336 3.6e-26 122.5 89 61.8
CDE02G3908 Ceratophyllum demersum HOM05D001333 ORTHO05D001208 1.8e-25 120.2 89 62.9
AUR62025539 Chenopodium quinoa HOM05D007397 ORTHO05D009336 6.7e-25 118.2 88 65.9
HPP92_025097 Vanilla planifolia HOM05D007397 ORTHO05D009336 1.1e-24 117.5 92 57.6
Os06g0484500 Oryza sativa ssp. japonica HOM05D007397 ORTHO05D009336 1.3e-23 114.0 92 60.9
SMO229G0021 Selaginella moellendorffii HOM05D007397 ORTHO05D009336 4.1e-22 109.0 87 59.8
Zm00001eb397310 Zea mays HOM05D007397 ORTHO05D009336 2.2e-20 103.2 86 55.8
Mapoly0043s0078 Marchantia polymorpha HOM05D007397 ORTHO05D009336 1.9e-19 100.1 88 50.0
AagrBONN_evm.TU.Sc2ySwM_368.51 Anthoceros agrestis HOM05D007397 ORTHO05D009336 2.6e-16 89.7 79 51.9
ECA238G2043 Erigeron canadensis HOM05D005234 ORTHO05D006583 8.2e-15 84.7 48 83.3
Nitab4.5_0006737g0020 Nicotiana tabacum HOM05D007397 ORTHO05D009336 5.3e-14 82.0 158 50.6
C03p57580 Brassica napus HOM05D007397 ORTHO05D009336 1.8e-09 67.0 86 41.9
BcaC03g17725 Brassica carinata HOM05D007397 ORTHO05D009336 6.8e-09 65.1 86 41.9
Cfa009156 Carpinus fangiana HOM05D007397 ORTHO05D009336 2.8e-07 59.7 36 77.8
Duzib114G0919 Durio zibethinus HOM05D007397 ORTHO05D009336 6.3e-07 58.5 34 76.5


User provided reference genes

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