Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.10G035800 Manihot esculenta HOM05D006938 ORTHO05D008600 6.9e-93 344.0 176 100.0
Sabra02G0050200 Salix brachista HOM05D006938 ORTHO05D008600 5.4e-61 238.0 177 69.5
Potri.002G062100 Populus trichocarpa HOM05D006938 ORTHO05D008600 1.3e-59 233.4 175 70.9
Manes.07G111600 Manihot esculenta HOM05D006938 ORTHO05D008600 1.1e-58 230.3 173 69.9
Potri.005G199000 Populus trichocarpa HOM05D006938 ORTHO05D008600 7.3e-58 227.6 176 66.5
TAR629G2816 Trochodendron aralioides HOM05D006938 ORTHO05D008600 1.2e-55 220.3 176 65.3
Atru.chr11.1233 Acer truncatum HOM05D006938 ORTHO05D008600 2.6e-55 219.2 170 66.5
Atru.chr11.1321 Acer truncatum HOM05D006938 ORTHO05D008600 2.6e-55 219.2 170 66.5
CSS0018133 Camellia sinensis var. sinensis HOM05D006938 ORTHO05D008600 1.1e-53 213.8 171 66.1
Ciclev10032755m.g Citrus clementina HOM05D006938 ORTHO05D008600 2.4e-53 212.6 174 61.5
Duzib084G0622 Durio zibethinus HOM05D006938 ORTHO05D008600 2.4e-53 212.6 176 65.3
vmacro22268 Vaccinium macrocarpon HOM05D006938 ORTHO05D008600 2.4e-53 212.6 175 64.0
Thecc.03G060300 Theobroma cacao HOM05D006938 ORTHO05D008600 9.2e-53 210.7 177 65.0
Dinv17599 Davidia involucrata HOM05D006938 ORTHO05D008600 2.0e-52 209.5 175 62.9
Cpa.g.sc51.44 Carica papaya HOM05D006938 ORTHO05D008600 8.6e-51 204.1 178 62.9
Medtr1g097270 Medicago truncatula HOM05D006938 ORTHO05D008600 8.6e-51 204.1 176 61.4
Cc07_g19080 Coffea canephora HOM05D006938 ORTHO05D008600 2.5e-50 202.6 177 62.7
vmacro22787 Vaccinium macrocarpon HOM05D006938 ORTHO05D008600 4.3e-50 201.8 122 82.0
TPR.G23154 Trifolium pratense HOM05D006938 ORTHO05D008600 7.3e-50 201.1 176 60.8
Eucgr.G00991 Eucalyptus grandis HOM05D006938 ORTHO05D008600 9.5e-50 200.7 140 74.3
Glyma.10G219400 Glycine max HOM05D006938 ORTHO05D008600 9.5e-50 200.7 162 69.8
Glyma.20G172300 Glycine max HOM05D006938 ORTHO05D008600 9.5e-50 200.7 162 69.8
QL03p043666 Quercus lobata HOM05D006938 ORTHO05D008600 1.2e-49 200.3 177 63.3
Actinidia11174 Actinidia chinensis HOM05D006938 ORTHO05D008600 2.8e-49 199.1 170 62.9
MELO3C015984.2 Cucumis melo HOM05D006938 ORTHO05D008600 3.6e-49 198.7 177 62.7
Lj6P721T41 Lonicera japonica HOM05D006938 ORTHO05D008600 6.2e-49 198.0 173 63.0
Aqoxy3G04277 Aquilegia oxysepala HOM05D006938 ORTHO05D008600 8.0e-49 197.6 178 63.5
Prupe.1G345500 Prunus persica HOM05D006938 ORTHO05D008600 1.1e-48 197.2 179 60.9
Psat6g189200 Pisum sativum HOM05D006938 ORTHO05D008600 1.4e-48 196.8 173 64.7
arahy.Tifrunner.gnm1.ann1.ZPRB1V Arachis hypogaea HOM05D006938 ORTHO05D008600 1.8e-48 196.4 172 64.0
CsaV3_7G029440 Cucumis sativus L. HOM05D006938 ORTHO05D008600 4.0e-48 195.3 132 75.8
Lj5g0002504 Lotus japonicus HOM05D006938 ORTHO05D008600 4.0e-48 195.3 179 62.6
TWI53G1636 Tripterygium wilfordii HOM05D006938 ORTHO05D008600 5.2e-48 194.9 172 63.4
Ca_10639_v3 Cicer arietinum L. HOM05D006938 ORTHO05D008600 6.8e-48 194.5 176 59.7
Hund24283 Selenicereus undatus HOM05D006938 ORTHO05D008600 6.8e-48 194.5 180 62.2
CiPaw.09G164200 Carya illinoinensis HOM05D006938 ORTHO05D008600 8.9e-48 194.1 130 76.9
Oeu024662.1 Olea europaea HOM05D006938 ORTHO05D008600 8.9e-48 194.1 119 80.7
PGR142G2203 Punica granatum HOM05D006938 ORTHO05D008600 8.9e-48 194.1 179 61.5
RcHm_v2.0_Chr4g0446461 Rosa chinensis HOM05D006938 ORTHO05D008600 8.9e-48 194.1 176 61.4
Peaxi162Scf00363g00087 Petunia axillaris HOM05D006938 ORTHO05D008600 1.2e-47 193.7 175 58.3
Hma1.2p1_0232F.1_g097690 Hydrangea macrophylla HOM05D006938 ORTHO05D008600 2.0e-47 193.0 171 62.6
Phvul.007G086000 Phaseolus vulgaris HOM05D006938 ORTHO05D008600 2.0e-47 193.0 181 61.9
Gohir.D11G002100 Gossypium hirsutum HOM05D006938 ORTHO05D008600 3.4e-47 192.2 162 66.7
Gorai.007G003100 Gossypium raimondii HOM05D006938 ORTHO05D008600 3.4e-47 192.2 161 67.1
Thhalv10005006m.g Eutrema salsugineum HOM05D006938 ORTHO05D008600 4.4e-47 191.8 171 61.4
FAN17G2681 Fragaria x ananassa HOM05D006938 ORTHO05D008600 4.4e-47 191.8 178 61.8
ClCG09G005720 Citrullus lanatus HOM05D006938 ORTHO05D008600 7.5e-47 191.0 177 61.0
FvH4_4g36740 Fragaria vesca HOM05D006938 ORTHO05D008600 7.5e-47 191.0 156 67.3
FAN12G4276 Fragaria x ananassa HOM05D006938 ORTHO05D008600 7.5e-47 191.0 156 67.3
Gohir.A11G002500 Gossypium hirsutum HOM05D006938 ORTHO05D008600 9.8e-47 190.7 161 66.5
MBI06_g36504_MAGBIO Magnolia biondii HOM05D006938 ORTHO05D008600 9.8e-47 190.7 146 66.4
Sp7g06080 Schrenkiella parvula HOM05D006938 ORTHO05D008600 9.8e-47 190.7 116 81.9
AT5G36120 Arabidopsis thaliana HOM05D006938 ORTHO05D008600 1.7e-46 189.9 148 66.2
MD13G1007500 Malus domestica HOM05D006938 ORTHO05D008600 1.7e-46 189.9 173 59.5
Rhsim06G0126000 Rhododendron simsii HOM05D006938 ORTHO05D008600 1.7e-46 189.9 116 82.8
Lalb_Chr03g0035761 Lupinus albus HOM05D006938 ORTHO05D008600 2.2e-46 189.5 155 67.1
BcaB02g08043 Brassica carinata HOM05D006938 ORTHO05D008600 4.9e-46 188.3 114 81.6
BcaC08g44319 Brassica carinata HOM05D006938 ORTHO05D008600 4.9e-46 188.3 116 80.2
A05p16420 Brassica napus HOM05D006938 ORTHO05D008600 4.9e-46 188.3 116 80.2
C06p17420 Brassica napus HOM05D006938 ORTHO05D008600 4.9e-46 188.3 116 80.2
BolC6t36937H Brassica oleracea HOM05D006938 ORTHO05D008600 4.9e-46 188.3 116 80.2
SGA_v2.0_scaffold25G10864 Striga asiatica HOM05D006938 ORTHO05D008600 4.9e-46 188.3 104 90.4
HanXRQChr17g0540771 Helianthus annuus HOM05D006938 ORTHO05D008600 6.4e-46 188.0 174 63.8
PSO478G3769 Papaver somniferum HOM05D006938 ORTHO05D008600 8.3e-46 187.6 172 59.3
SGA_v2.0_scaffold467G52037 Striga asiatica HOM05D006938 ORTHO05D008600 8.3e-46 187.6 107 86.9
Haze_11723 Corylus avellana HOM05D006938 ORTHO05D008600 1.1e-45 187.2 178 61.2
ECA246G5327 Erigeron canadensis HOM05D006938 ORTHO05D008600 4.1e-45 185.3 118 80.5
Sed0026401 Sechium edule HOM05D006938 ORTHO05D008600 4.1e-45 185.3 132 72.0
MD16G1000600 Malus domestica HOM05D006938 ORTHO05D008600 5.4e-45 184.9 174 58.0
AL7G45100 Arabidopsis lyrata HOM05D006938 ORTHO05D008600 7.0e-45 184.5 116 77.6
PSO017G4971 Papaver somniferum HOM05D006938 ORTHO05D008600 9.2e-45 184.1 175 58.3
THA.LOC104805738 Tarenaya hassleriana HOM05D006938 ORTHO05D008600 9.2e-45 184.1 141 66.7
BraA05t20549Z Brassica rapa HOM05D006938 ORTHO05D008600 1.2e-44 183.7 117 79.5
Nn4g24932 Nelumbo nucifera HOM05D006938 ORTHO05D008600 1.2e-44 183.7 148 67.6
Oeu022179.1 Olea europaea HOM05D006938 ORTHO05D008600 1.2e-44 183.7 100 92.0
ATR0618G369 Amborella trichopoda HOM05D006938 ORTHO05D008600 1.6e-44 183.3 102 89.2
Cfa008713 Carpinus fangiana HOM05D006938 ORTHO05D008600 1.6e-44 183.3 117 79.5
Lsat_1_v5_gn_3_33800 Lactuca sativa HOM05D006938 ORTHO05D008600 1.6e-44 183.3 107 87.9
AUR62017669 Chenopodium quinoa HOM05D006938 ORTHO05D008600 2.0e-44 183.0 175 56.0
GSVIVG01010180001 Vitis vinifera HOM05D006938 ORTHO05D008600 2.0e-44 183.0 110 83.6
CAN.G157.8 Capsicum annuum HOM05D006938 ORTHO05D008600 2.7e-44 182.6 153 65.4
DCAR_023442 Daucus carota HOM05D007059 ORTHO05D008600 2.7e-44 182.6 132 72.7
PGSC0003DMG400019837 Solanum tuberosum HOM05D006938 ORTHO05D008600 2.7e-44 182.6 172 58.7
CANSAT64G2234 Cannabis sativa HOM05D006938 ORTHO05D008600 4.6e-44 181.8 128 73.4
Carub.0007s3179 Capsella rubella HOM05D006938 ORTHO05D008600 1.0e-43 180.6 117 77.8
Sc20g0002200 Simmondsia chinensis HOM05D006938 ORTHO05D008600 1.7e-43 179.9 122 73.0
HPP92_002538 Vanilla planifolia HOM05D006938 ORTHO05D008600 1.7e-43 179.9 109 79.8
Aa31LG9G17890 Aethionema arabicum HOM05D006938 ORTHO05D008600 3.0e-43 179.1 114 77.2
AUR62015206 Chenopodium quinoa HOM05D006938 ORTHO05D008600 3.0e-43 179.1 173 54.3
Migut.I00065 Erythranthe guttata HOM05D006938 ORTHO05D008600 3.0e-43 179.1 104 83.7
Nitab4.5_0002392g0050 Nicotiana tabacum HOM05D006938 ORTHO05D008600 3.0e-43 179.1 116 79.3
HPP92_002496 Vanilla planifolia HOM05D006938 ORTHO05D008600 6.6e-43 177.9 109 78.9
Hma1.2p1_0499F.1_g166850 Hydrangea macrophylla HOM05D006938 ORTHO05D008600 8.6e-43 177.6 120 74.2
Nitab4.5_0000139g0080 Nicotiana tabacum HOM05D006938 ORTHO05D008600 8.6e-43 177.6 116 78.4
Ah.01g012920 Amaranthus hybridus HOM05D006938 ORTHO05D008600 2.5e-42 176.0 119 74.8
RcHm_v2.0_Chr3g0449681 Rosa chinensis HOM05D006938 ORTHO05D008600 1.2e-41 173.7 105 81.0
Sopen02g005300 Solanum pennellii HOM05D006938 ORTHO05D008600 1.2e-41 173.7 110 80.0
Solyc02g021000.3 Solanum lycopersicum HOM05D006938 ORTHO05D008600 6.2e-41 171.4 110 80.0
Os01g0966200 Oryza sativa ssp. japonica HOM05D006938 ORTHO05D008600 1.8e-40 169.9 101 81.2
Sc10g0007070 Simmondsia chinensis HOM05D006938 ORTHO05D008600 1.2e-39 167.2 117 71.8
Zm00001eb362370 Zea mays HOM05D006938 ORTHO05D008600 1.5e-39 166.8 114 72.8
Mapoly0101s0070 Marchantia polymorpha HOM05D006938 ORTHO05D008600 1.7e-35 153.3 117 66.7
AagrBONN_evm.TU.Sc2ySwM_344.2773 Anthoceros agrestis HOM05D006938 ORTHO05D008600 2.3e-35 152.9 112 67.9
Pp3c10_19880 Physcomitrium patens HOM05D006938 ORTHO05D008600 5.6e-34 148.3 103 70.9
SEGI_34816 Sequoiadendron giganteum HOM05D006938 ORTHO05D008600 2.8e-33 146.0 106 67.9
CDE07G1356 Ceratophyllum demersum HOM05D002851 ORTHO05D003084 1.4e-32 143.7 85 84.7
MBI06_g34033_MAGBIO Magnolia biondii HOM05D006938 ORTHO05D008600 1.9e-29 133.3 80 81.2
MCO16G496 Micromonas commoda HOM05D006938 ORTHO05D008600 5.4e-29 131.7 120 56.7
unitig_21.g20451 Utricularia gibba HOM05D006938 ORTHO05D008600 1.3e-27 127.1 70 84.3
Peaxi162Scf00818g00021 Petunia axillaris HOM05D006938 ORTHO05D008600 4.0e-24 115.5 175 41.1
Cre01.g052400 Chlamydomonas reinhardtii HOM05D006938 ORTHO05D008600 7.8e-20 101.3 93 51.6
CDE06G1837 Ceratophyllum demersum HOM05D006938 ORTHO05D008600 2.5e-18 96.3 55 85.5
PRCOL_00002779 Prasinoderma coloniale HOM05D006938 ORTHO05D008600 2.1e-17 93.2 74 58.1
CsaV3_4G025230 Cucumis sativus L. HOM05D006938 ORTHO05D008600 1.1e-16 90.9 63 76.2
EL10Ac9g22924 Beta vulgaris HOM05D006938 ORTHO05D008600 6.9e-16 88.2 44 90.9
Sc10g0007050 Simmondsia chinensis HOM05D006938 ORTHO05D008600 3.0e-11 72.8 95 44.2
Migut.I00066 Erythranthe guttata HOM05D006938 ORTHO05D008600 1.1e-10 70.9 44 70.5
BcaC02g10904 Brassica carinata HOM05D006938 ORTHO05D008600 2.6e-07 59.7 50 64.0


User provided reference genes

Program Settings