Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.10G016915 Manihot esculenta HOM05D007615 ORTHO05D009643 6.1e-55 217.2 110 100.0
Manes.07G125900 Manihot esculenta HOM05D007615 ORTHO05D009643 6.8e-22 107.5 120 50.8
Sabra10G0147900 Salix brachista HOM05D007615 ORTHO05D009643 1.7e-20 102.8 120 47.5
Potri.010G192300 Populus trichocarpa HOM05D007615 ORTHO05D009643 3.8e-20 101.7 120 46.7
CANSAT56G1044 Cannabis sativa HOM05D007615 ORTHO05D009643 9.2e-19 97.1 120 47.5
Haze_17188 Corylus avellana HOM05D007615 ORTHO05D009643 2.1e-18 95.9 120 46.7
Cfa001360 Carpinus fangiana HOM05D007615 ORTHO05D009643 6.0e-18 94.4 120 45.8
CiPaw.01G296100 Carya illinoinensis HOM05D007615 ORTHO05D009643 6.0e-18 94.4 120 44.2
Dinv20960 Davidia involucrata HOM05D000277 ORTHO05D000214 1.3e-17 93.2 120 43.3
Dinv20983 Davidia involucrata HOM05D000277 ORTHO05D000214 1.3e-17 93.2 120 43.3
TWI53G1973 Tripterygium wilfordii HOM05D007615 ORTHO05D009643 1.1e-16 90.1 120 43.3
Atru.chr12.235 Acer truncatum HOM05D007615 ORTHO05D009643 1.9e-16 89.4 120 45.0
QL08p062684 Quercus lobata HOM05D007615 ORTHO05D009643 3.3e-16 88.6 120 42.5
Duzib170G1068 Durio zibethinus HOM05D007615 ORTHO05D009643 4.3e-16 88.2 120 45.0
Medtr5g081970 Medicago truncatula HOM05D007615 ORTHO05D009643 4.3e-16 88.2 121 43.8
LjContig00357g0021515 Lotus japonicus HOM05D007615 ORTHO05D009643 5.6e-16 87.8 120 42.5
CSS0034825 Camellia sinensis var. sinensis HOM05D007615 ORTHO05D009643 7.3e-16 87.4 120 40.0
Phvul.008G225800 Phaseolus vulgaris HOM05D007615 ORTHO05D009643 2.1e-15 85.9 120 41.7
Psat2g035440 Pisum sativum HOM05D007615 ORTHO05D009643 2.1e-15 85.9 120 42.5
RcHm_v2.0_Chr1g0369501 Rosa chinensis HOM05D007615 ORTHO05D009643 2.1e-15 85.9 120 42.5
Sc11g0007250 Simmondsia chinensis HOM05D007615 ORTHO05D009643 2.1e-15 85.9 120 41.7
EL10Ac2g04791 Beta vulgaris HOM05D007615 ORTHO05D009643 2.8e-15 85.5 120 41.7
VMungo0647G1713 Vigna mungo HOM05D007615 ORTHO05D009643 2.8e-15 85.5 120 43.3
Ca_05936_v3 Cicer arietinum L. HOM05D007615 ORTHO05D009643 3.6e-15 85.1 121 43.0
Ciclev10032806m.g Citrus clementina HOM05D007615 ORTHO05D009643 3.6e-15 85.1 120 42.5
PSO384G4204 Papaver somniferum HOM05D007615 ORTHO05D009643 3.6e-15 85.1 121 46.3
FAN10G2819 Fragaria x ananassa HOM05D007615 ORTHO05D009643 6.2e-15 84.3 120 41.7
MD07G1214900 Malus domestica HOM05D007615 ORTHO05D009643 8.1e-15 84.0 119 39.5
FAN03G2533 Fragaria x ananassa HOM05D007615 ORTHO05D009643 1.1e-14 83.6 119 41.2
Sed0010184 Sechium edule HOM05D007615 ORTHO05D009643 1.1e-14 83.6 120 41.7
Thecc.09G179400 Theobroma cacao HOM05D007615 ORTHO05D009643 1.1e-14 83.6 120 44.2
FAN01G2468 Fragaria x ananassa HOM05D007615 ORTHO05D009643 1.4e-14 83.2 120 40.8
COL.COLO4_24429 Corchorus olitorius HOM05D007615 ORTHO05D009643 1.8e-14 82.8 120 41.7
Glyma.14G061700 Glycine max HOM05D007615 ORTHO05D009643 1.8e-14 82.8 120 40.8
Psat3g208000 Pisum sativum HOM05D007615 ORTHO05D009643 1.8e-14 82.8 120 42.5
FAN06G4073 Fragaria x ananassa HOM05D007615 ORTHO05D009643 2.4e-14 82.4 120 40.8
Lalb_Chr17g0346631 Lupinus albus HOM05D007615 ORTHO05D009643 2.4e-14 82.4 120 40.8
PSO339G1281 Papaver somniferum HOM05D007615 ORTHO05D009643 2.4e-14 82.4 121 43.8
Prupe.2G246900 Prunus persica HOM05D007615 ORTHO05D009643 2.4e-14 82.4 121 41.3
vmacro10061 Vaccinium macrocarpon HOM05D007615 ORTHO05D009643 2.4e-14 82.4 120 40.0
Ah.16g103150 Amaranthus hybridus HOM05D007615 ORTHO05D009643 5.2e-14 81.3 120 40.8
Cpa.g.sc19.199 Carica papaya HOM05D007615 ORTHO05D009643 6.9e-14 80.9 120 40.0
Gohir.A08G018800 Gossypium hirsutum HOM05D007615 ORTHO05D009643 6.9e-14 80.9 121 43.0
Cc02_g06860 Coffea canephora HOM05D007615 ORTHO05D009643 9.0e-14 80.5 122 40.2
MELO3C008283.2 Cucumis melo HOM05D007615 ORTHO05D009643 1.2e-13 80.1 121 42.1
Eucgr.K02662 Eucalyptus grandis HOM05D007615 ORTHO05D009643 1.5e-13 79.7 120 41.7
Actinidia00935 Actinidia chinensis HOM05D007615 ORTHO05D009643 2.0e-13 79.3 120 39.2
CsaV3_6G001660 Cucumis sativus L. HOM05D007615 ORTHO05D009643 2.6e-13 79.0 121 41.3
ECA238G0429 Erigeron canadensis HOM05D007615 ORTHO05D009643 2.6e-13 79.0 120 39.2
Nitab4.5_0000737g0100 Nicotiana tabacum HOM05D007615 ORTHO05D009643 4.4e-13 78.2 119 39.5
Sopen04g004760 Solanum pennellii HOM05D007615 ORTHO05D009643 7.6e-13 77.4 118 36.4
ClCG11G006310 Citrullus lanatus HOM05D007615 ORTHO05D009643 1.3e-12 76.6 121 38.8
Rhsim09G0172300 Rhododendron simsii HOM05D007615 ORTHO05D009643 1.3e-12 76.6 120 38.3
Gorai.004G026800 Gossypium raimondii HOM05D007615 ORTHO05D009643 1.7e-12 76.3 121 42.1
PGR142G0690 Punica granatum HOM05D007615 ORTHO05D009643 1.7e-12 76.3 121 42.1
Aqoxy4G02652 Aquilegia oxysepala HOM05D007615 ORTHO05D009643 2.9e-12 75.5 121 38.0
Gohir.D08G029400 Gossypium hirsutum HOM05D007615 ORTHO05D009643 2.9e-12 75.5 121 42.1
Nitab4.5_0001654g0050 Nicotiana tabacum HOM05D007615 ORTHO05D009643 2.9e-12 75.5 119 37.0
PGSC0003DMG400016017 Solanum tuberosum HOM05D007615 ORTHO05D009643 2.9e-12 75.5 118 35.6
TAR636G2052 Trochodendron aralioides HOM05D007615 ORTHO05D009643 3.8e-12 75.1 120 37.5
TAR636G3510 Trochodendron aralioides HOM05D007615 ORTHO05D009643 3.8e-12 75.1 120 37.5
DCAR_012632 Daucus carota HOM05D007615 ORTHO05D009643 6.4e-12 74.3 121 37.2
Nn2g11402 Nelumbo nucifera HOM05D007615 ORTHO05D009643 1.1e-11 73.6 120 39.2
Hund13833 Selenicereus undatus HOM05D007615 ORTHO05D009643 1.1e-11 73.6 120 36.7
TPR.G19858 Trifolium pratense HOM05D007615 ORTHO05D009643 2.4e-11 72.4 136 38.2
Lsat_1_v5_gn_2_121681 Lactuca sativa HOM05D000277 ORTHO05D000214 3.2e-11 72.0 120 37.5
Peaxi162Scf00079g00249 Petunia axillaris HOM05D007615 ORTHO05D009643 3.2e-11 72.0 116 37.1
HanXRQChr07g0202461 Helianthus annuus HOM05D007615 ORTHO05D009643 1.6e-10 69.7 120 35.0
MBI14_g04425_MAGBIO Magnolia biondii HOM05D005325 ORTHO05D008457 1.6e-10 69.7 120 38.3
SGA_v2.0_scaffold456G51922 Striga asiatica HOM05D002401 ORTHO05D007109 2.7e-10 68.9 118 37.3
Oeu063511.1 Olea europaea HOM05D007615 ORTHO05D009643 3.5e-10 68.6 120 38.3
RcHm_v2.0_Chr3g0468601 Rosa chinensis HOM05D007615 ORTHO05D009643 3.5e-10 68.6 115 38.3
Migut.F01421 Erythranthe guttata HOM05D007615 ORTHO05D009643 6.6e-09 64.3 120 34.2
CDE10G1314 Ceratophyllum demersum HOM05D007615 ORTHO05D009643 1.1e-08 63.5 120 36.7
Potri.008G065101 Populus trichocarpa HOM05D007615 ORTHO05D009643 1.1e-08 63.5 69 47.8
SalBow6G0125 Salvia bowleyana HOM05D007615 ORTHO05D009643 1.5e-08 63.2 118 34.7
Aa31LG10G10810 Aethionema arabicum HOM05D007615 ORTHO05D009643 5.6e-08 61.2 121 34.7
Thhalv10010736m.g Eutrema salsugineum HOM05D007615 ORTHO05D009643 5.6e-08 61.2 122 34.4
CARHR165930 Cardamine hirsuta HOM05D007615 ORTHO05D009643 7.3e-08 60.8 127 30.7
Sp5g06670 Schrenkiella parvula HOM05D007615 ORTHO05D009643 1.3e-07 60.1 125 30.4
Carub.0005s2260 Capsella rubella HOM05D007615 ORTHO05D009643 1.6e-07 59.7 129 31.8
unitig_62.g23933 Utricularia gibba HOM05D007615 ORTHO05D009643 1.6e-07 59.7 118 35.6
A09p48810 Brassica napus HOM05D007615 ORTHO05D009643 2.1e-07 59.3 123 31.7
BraA09t40334Z Brassica rapa HOM05D007615 ORTHO05D009643 2.1e-07 59.3 123 31.7
THA.LOC104810077 Tarenaya hassleriana HOM05D007615 ORTHO05D009643 2.8e-07 58.9 123 35.8
SGA_v2.0_scaffold304G47925 Striga asiatica HOM05D002401 ORTHO05D007109 8.1e-07 57.4 106 34.9
C08p31140 Brassica napus HOM05D007615 ORTHO05D009643 4.0e-06 55.1 126 31.0
BolC8t50735H Brassica oleracea HOM05D007615 ORTHO05D009643 4.0e-06 55.1 126 31.0
ATR0618G365 Amborella trichopoda HOM05D005325 ORTHO05D008457 9.0e-06 53.9 120 31.7
AT3G55820 Arabidopsis thaliana HOM05D007615 ORTHO05D009643 9.0e-06 53.9 127 29.1


User provided reference genes

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