Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.10G014600 Manihot esculenta HOM05D006281 ORTHO05D005138 3.0e-128 461.8 231 100.0
Ciclev10033546m.g Citrus clementina HOM05D006281 ORTHO05D005138 7.1e-29 131.7 266 35.7
Haze_18961 Corylus avellana HOM05D006281 ORTHO05D005138 9.3e-29 131.3 244 38.5
Haze_17206 Corylus avellana HOM05D006281 ORTHO05D005138 1.3e-27 127.5 266 36.5
FvH4_7g24210 Fragaria vesca HOM05D006281 ORTHO05D005138 1.3e-27 127.5 235 39.6
Gohir.A10G234000 Gossypium hirsutum HOM05D006281 ORTHO05D005138 1.8e-27 127.1 238 37.0
Cfa001348 Carpinus fangiana HOM05D006281 ORTHO05D005138 1.5e-26 124.0 260 36.5
FAN01G2469 Fragaria x ananassa HOM05D006281 ORTHO05D005138 1.3e-25 120.9 241 38.2
Gorai.011G284000 Gossypium raimondii HOM05D006281 ORTHO05D005138 1.3e-25 120.9 238 35.3
FAN03G1065 Fragaria x ananassa HOM05D006281 ORTHO05D005138 1.6e-25 120.6 235 37.4
QL08p063014 Quercus lobata HOM05D006281 ORTHO05D005138 8.1e-25 118.2 239 34.7
Thecc.10G022800 Theobroma cacao HOM05D006281 ORTHO05D005138 2.4e-24 116.7 293 31.1
Gohir.D10G246300 Gossypium hirsutum HOM05D006281 ORTHO05D005138 3.1e-24 116.3 229 34.1
TWI53G0395 Tripterygium wilfordii HOM05D006281 ORTHO05D005138 2.0e-23 113.6 314 30.6
FAN10G2794 Fragaria x ananassa HOM05D006949 ORTHO05D008621 4.5e-23 112.5 235 37.4
CiPaw.16G099300 Carya illinoinensis HOM05D006281 ORTHO05D005138 1.1e-21 107.8 244 34.4
QL05p066700 Quercus lobata HOM05D006281 ORTHO05D005138 1.1e-21 107.8 216 35.2
TPR.G19854 Trifolium pratense HOM05D006281 ORTHO05D005138 2.5e-21 106.7 251 33.1
ClCG11G006260 Citrullus lanatus HOM05D006281 ORTHO05D005138 5.5e-21 105.5 244 37.3
Sed0005546 Sechium edule HOM05D006281 ORTHO05D005138 5.5e-21 105.5 225 37.3
Phvul.007G184700 Phaseolus vulgaris HOM05D006281 ORTHO05D005138 7.1e-21 105.1 238 35.7
arahy.Tifrunner.gnm1.ann1.WVY9VA Arachis hypogaea HOM05D006281 ORTHO05D005138 9.3e-21 104.8 265 32.1
Lj5g0025792 Lotus japonicus HOM05D006281 ORTHO05D005138 1.6e-20 104.0 234 35.5
Medtr5g082250 Medicago truncatula HOM05D006281 ORTHO05D005138 1.6e-20 104.0 242 33.1
Actinidia29689 Actinidia chinensis HOM05D006949 ORTHO05D008621 2.1e-20 103.6 251 35.9
Ca_05949_v3 Cicer arietinum L. HOM05D006281 ORTHO05D005138 2.1e-20 103.6 250 32.0
Dinv34408 Davidia involucrata HOM05D006281 ORTHO05D005138 2.7e-20 103.2 292 32.9
RcHm_v2.0_Chr6g0274431 Rosa chinensis HOM05D006281 ORTHO05D005138 2.7e-20 103.2 206 37.4
Psat0s288g0040 Pisum sativum HOM05D006281 ORTHO05D005138 3.5e-20 102.8 260 32.7
Actinidia33937 Actinidia chinensis HOM05D006281 ORTHO05D005138 1.0e-19 101.3 249 36.9
arahy.Tifrunner.gnm1.ann1.Y6I58B Arachis hypogaea HOM05D006281 ORTHO05D005138 1.3e-19 100.9 265 32.1
THA.LOC104824311 Tarenaya hassleriana HOM05D006281 ORTHO05D005138 1.3e-19 100.9 257 33.5
CiPaw.16G099400 Carya illinoinensis HOM05D006281 ORTHO05D005138 2.3e-19 100.1 216 34.3
AUR62043156 Chenopodium quinoa HOM05D006281 ORTHO05D005138 2.3e-19 100.1 242 33.5
TAR633G0389 Trochodendron aralioides HOM05D006281 ORTHO05D005138 5.1e-19 99.0 269 33.8
CsaV3_6G001730 Cucumis sativus L. HOM05D006281 ORTHO05D005138 1.5e-18 97.4 234 35.0
QL05p072246 Quercus lobata HOM05D021521 ORTHO05D005138 3.3e-18 96.3 126 45.2
Duzib114G0722 Durio zibethinus HOM05D006949 ORTHO05D008621 5.6e-18 95.5 258 30.6
Atru.chr12.10 Acer truncatum HOM05D006281 ORTHO05D005138 7.4e-18 95.1 231 32.0
Aqoxy3G02946 Aquilegia oxysepala HOM05D006281 ORTHO05D005138 1.6e-17 94.0 243 34.2
FAN15G2203 Fragaria x ananassa HOM05D006281 ORTHO05D005138 2.8e-17 93.2 204 34.8
FAN20G0701 Fragaria x ananassa HOM05D006281 ORTHO05D005138 3.7e-17 92.8 204 34.8
AUR62040493 Chenopodium quinoa HOM05D006281 ORTHO05D005138 6.2e-17 92.0 241 30.3
FAN06G1003 Fragaria x ananassa HOM05D006281 ORTHO05D005138 6.2e-17 92.0 240 31.7
Ca_10064_v3 Cicer arietinum L. HOM05D006281 ORTHO05D005138 8.2e-17 91.7 246 33.7
QL11p005716 Quercus lobata HOM05D021521 ORTHO05D005138 1.4e-16 90.9 126 45.2
Phvul.008G225200 Phaseolus vulgaris HOM05D006281 ORTHO05D005138 2.4e-16 90.1 249 31.3
VMungo0647G1369 Vigna mungo HOM05D006949 ORTHO05D008621 4.0e-16 89.4 239 32.2
Lsat_1_v5_gn_8_31300 Lactuca sativa HOM05D006281 ORTHO05D005138 1.5e-15 87.4 199 34.2
Migut.F00696 Erythranthe guttata HOM05D006281 ORTHO05D005138 3.4e-15 86.3 234 30.8
LjContig00357g0022557 Lotus japonicus HOM05D006281 ORTHO05D005138 4.5e-15 85.9 83 55.4
Lalb_Chr02g0148591 Lupinus albus HOM05D006281 ORTHO05D005138 1.3e-14 84.3 236 30.5
Medtr1g081780 Medicago truncatula HOM05D006281 ORTHO05D005138 2.2e-14 83.6 108 50.0
MD17G1067400 Malus domestica HOM05D006281 ORTHO05D005138 6.5e-14 82.0 93 49.5
Glyma.20G229400 Glycine max HOM05D006281 ORTHO05D005138 8.4e-14 81.6 236 31.8
SalBow3G2112 Salvia bowleyana HOM05D006281 ORTHO05D005138 8.4e-14 81.6 233 31.8
MELO3C029900.2 Cucumis melo HOM05D006281 ORTHO05D005138 1.1e-13 81.3 248 31.5
RcHm_v2.0_Chr1g0369781 Rosa chinensis HOM05D006281 ORTHO05D005138 1.1e-13 81.3 338 27.5
TAR623G1110 Trochodendron aralioides HOM05D000895 ORTHO05D005138 1.1e-13 81.3 251 33.5
Potri.010G190800 Populus trichocarpa HOM05D006281 ORTHO05D005138 1.9e-13 80.5 233 27.9
EL10Ac7g16532 Beta vulgaris HOM05D006281 ORTHO05D005138 4.2e-13 79.3 279 30.8
VMungo0720G2983 Vigna mungo HOM05D006281 ORTHO05D005138 4.2e-13 79.3 109 45.9
Cc02_g06750 Coffea canephora HOM05D006281 ORTHO05D005138 5.5e-13 79.0 294 29.9
Sp4g22330 Schrenkiella parvula HOM05D010943 ORTHO05D005138 7.1e-13 78.6 271 30.3
TPR.G2715 Trifolium pratense HOM05D006281 ORTHO05D005138 1.2e-12 77.8 254 29.1
Sc07g0006300 Simmondsia chinensis HOM05D006281 ORTHO05D005138 2.1e-12 77.0 249 28.5
BcaB02g09060 Brassica carinata HOM05D010943 ORTHO05D005138 2.7e-12 76.6 72 55.6
Manes.07G127600 Manihot esculenta HOM05D006281 ORTHO05D005138 2.7e-12 76.6 212 30.2
BcaB01g03596 Brassica carinata HOM05D010943 ORTHO05D005138 3.5e-12 76.3 227 30.0
Lalb_Chr10g0105101 Lupinus albus HOM05D006281 ORTHO05D005138 3.5e-12 76.3 145 38.6
MD01G1149600 Malus domestica HOM05D006281 ORTHO05D005138 3.5e-12 76.3 285 27.0
BolC4t22363H Brassica oleracea HOM05D001301 ORTHO05D001169 6.0e-12 75.5 72 55.6
BraA05t19609Z Brassica rapa HOM05D001301 ORTHO05D001169 6.0e-12 75.5 72 56.9
CANSAT56G1147 Cannabis sativa HOM05D006281 ORTHO05D005138 7.9e-12 75.1 122 41.8
Glyma.10G159300 Glycine max HOM05D006281 ORTHO05D005138 7.9e-12 75.1 260 28.5
Manes.10G014800 Manihot esculenta HOM05D006281 ORTHO05D005138 7.9e-12 75.1 191 30.9
SalBow6G7137 Salvia bowleyana HOM05D006281 ORTHO05D005138 7.9e-12 75.1 233 31.3
arahy.Tifrunner.gnm1.ann1.ZTR0B0 Arachis hypogaea HOM05D006281 ORTHO05D005138 1.0e-11 74.7 141 34.8
Nitab4.5_0000802g0120 Nicotiana tabacum HOM05D006281 ORTHO05D005138 1.0e-11 74.7 325 25.5
Peaxi162Scf01313g00024 Petunia axillaris HOM05D006281 ORTHO05D005138 1.0e-11 74.7 71 53.5
Zm00001eb050100 Zea mays HOM05D006281 ORTHO05D005138 1.0e-11 74.7 84 44.0
C04p07420 Brassica napus HOM05D001301 ORTHO05D001169 1.3e-11 74.3 72 55.6
MSTRG.8320 Avicennia marina HOM05D006281 ORTHO05D005138 1.8e-11 73.9 207 30.9
Nitab4.5_0005628g0020 Nicotiana tabacum HOM05D006281 ORTHO05D005138 1.8e-11 73.9 198 29.8
Nn2g11433 Nelumbo nucifera HOM05D006281 ORTHO05D005138 2.3e-11 73.6 71 54.9
Prupe.2G247900 Prunus persica HOM05D006281 ORTHO05D005138 2.3e-11 73.6 71 54.9
PGR142G2970 Punica granatum HOM05D006281 ORTHO05D005138 3.9e-11 72.8 67 52.2
CANSAT56G0859 Cannabis sativa HOM05D006281 ORTHO05D005138 5.1e-11 72.4 122 41.0
Manes.10G015100 Manihot esculenta HOM05D006281 ORTHO05D005138 6.7e-11 72.0 191 29.3
Oeu025174.1 Olea europaea HOM05D006281 ORTHO05D005138 6.7e-11 72.0 99 46.5
arahy.Tifrunner.gnm1.ann1.0XLH38 Arachis hypogaea HOM05D006281 ORTHO05D005138 8.7e-11 71.6 141 34.0
Thhalv10017194m.g Eutrema salsugineum HOM05D010943 ORTHO05D005138 1.1e-10 71.2 237 27.0
HanXRQChr12g0367471 Helianthus annuus HOM05D006281 ORTHO05D005138 1.1e-10 71.2 230 32.6
Sabra03G0071800 Salix brachista HOM05D063919 ORTHO05D005138 1.1e-10 71.2 180 31.7
Psat6g147880 Pisum sativum HOM05D006281 ORTHO05D005138 1.5e-10 70.9 119 41.2
Cc02_g06760 Coffea canephora HOM05D006281 ORTHO05D005138 2.5e-10 70.1 88 43.2
Glyma.02G255900 Glycine max HOM05D006281 ORTHO05D005138 2.5e-10 70.1 212 33.0
Nitab4.5_0000802g0100 Nicotiana tabacum HOM05D006281 ORTHO05D005138 2.5e-10 70.1 72 50.0
Solyc06g030540.4 Solanum lycopersicum HOM05D006281 ORTHO05D005138 2.5e-10 70.1 72 50.0
Sopen06g008590 Solanum pennellii HOM05D006281 ORTHO05D005138 2.5e-10 70.1 105 44.8
CAN.G372.4 Capsicum annuum HOM05D006281 ORTHO05D005138 3.3e-10 69.7 74 50.0
Aa31LG5G19580 Aethionema arabicum HOM05D010943 ORTHO05D005138 4.3e-10 69.3 76 52.6
Nitab4.5_0005628g0040 Nicotiana tabacum HOM05D006281 ORTHO05D005138 5.7e-10 68.9 72 48.6
PGR142G2831 Punica granatum HOM05D006281 ORTHO05D005138 5.7e-10 68.9 108 40.7
A03p22480 Brassica napus HOM05D010943 ORTHO05D005138 7.4e-10 68.6 237 27.8
BcaC01g05445 Brassica carinata HOM05D010943 ORTHO05D005138 1.3e-09 67.8 71 56.3
C03p26630 Brassica napus HOM05D010943 ORTHO05D005138 1.3e-09 67.8 71 56.3
Medtr1g111700 Medicago truncatula HOM05D006281 ORTHO05D005138 1.3e-09 67.8 74 45.9
A05p06410 Brassica napus HOM05D001301 ORTHO05D001169 1.6e-09 67.4 62 54.8
Medtr1g111690 Medicago truncatula HOM05D006281 ORTHO05D005138 2.2e-09 67.0 134 34.3
Medtr6g033440 Medicago truncatula HOM05D006281 ORTHO05D005138 2.2e-09 67.0 74 45.9
Zm00001eb050110 Zea mays HOM05D006281 ORTHO05D005138 3.7e-09 66.2 67 41.8
BolC3t15048H Brassica oleracea HOM05D010943 ORTHO05D005138 4.8e-09 65.9 69 56.5
DCAR_024837 Daucus carota HOM05D006281 ORTHO05D005138 6.3e-09 65.5 61 47.5
Nitab4.5_0000802g0130 Nicotiana tabacum HOM05D006281 ORTHO05D005138 6.3e-09 65.5 61 47.5
Nitab4.5_0005628g0030 Nicotiana tabacum HOM05D006281 ORTHO05D005138 6.3e-09 65.5 178 30.9
Carub.0001s3571 Capsella rubella HOM05D010943 ORTHO05D005138 1.1e-08 64.7 73 47.9
COL.COLO4_25627 Corchorus olitorius HOM05D006949 ORTHO05D008621 1.1e-08 64.7 130 38.5
Lsat_1_v5_gn_2_121281 Lactuca sativa HOM05D006281 ORTHO05D005138 1.1e-08 64.7 78 43.6
Os09g0114700 Oryza sativa ssp. japonica HOM05D006281 ORTHO05D005138 1.1e-08 64.7 67 50.7
Potri.003G104800 Populus trichocarpa HOM05D063919 ORTHO05D005138 1.1e-08 64.7 177 31.6
FvH4_2g13151 Fragaria vesca HOM05D006281 ORTHO05D005138 1.4e-08 64.3 106 40.6
Peaxi162Scf01313g00025 Petunia axillaris HOM05D006281 ORTHO05D005138 1.4e-08 64.3 266 25.9
Hund20200 Selenicereus undatus HOM05D006281 ORTHO05D005138 1.4e-08 64.3 125 40.0
BcaC03g15045 Brassica carinata HOM05D010943 ORTHO05D005138 2.4e-08 63.5 69 46.4
Glyma.06G220600 Glycine max HOM05D006281 ORTHO05D005138 3.1e-08 63.2 53 58.5
QL08p006117 Quercus lobata HOM05D021521 ORTHO05D005138 3.1e-08 63.2 51 54.9
ATR0618G177 Amborella trichopoda HOM05D006281 ORTHO05D005138 4.1e-08 62.8 102 38.2
AL1G53000 Arabidopsis lyrata HOM05D010943 ORTHO05D005138 4.1e-08 62.8 65 47.7
AT2G40020 Arabidopsis thaliana HOM05D010943 ORTHO05D005138 4.1e-08 62.8 73 53.4
Carub.0004s2218 Capsella rubella HOM05D010943 ORTHO05D005138 4.1e-08 62.8 69 52.2
ECA238G3711 Erigeron canadensis HOM05D006281 ORTHO05D005138 5.3e-08 62.4 265 26.4
DCAR_032142 Daucus carota HOM05D006281 ORTHO05D005138 6.9e-08 62.0 143 30.8
Dinv20972 Davidia involucrata HOM05D000895 ORTHO05D002393 9.0e-08 61.6 64 48.4
Dinv21033 Davidia involucrata HOM05D000895 ORTHO05D002393 9.0e-08 61.6 64 48.4
BolC2t08666H Brassica oleracea HOM05D010943 ORTHO05D005138 1.2e-07 61.2 70 47.1
Zm00001eb316030 Zea mays HOM05D006281 ORTHO05D005138 1.2e-07 61.2 73 47.9
MBI14_g22157_MAGBIO Magnolia biondii HOM05D006281 ORTHO05D005138 1.5e-07 60.8 70 47.1
ECA233G1951 Erigeron canadensis HOM05D006281 ORTHO05D005138 2.6e-07 60.1 88 46.6
BraA03t11475Z Brassica rapa HOM05D010943 ORTHO05D005138 4.5e-07 59.3 228 25.9
DCAR_027547 Daucus carota HOM05D000021 ORTHO05D035016 4.5e-07 59.3 91 39.6
vmacro06983 Vaccinium macrocarpon HOM05D006281 ORTHO05D005138 5.9e-07 58.9 59 49.2
GSVIVG01032854001 Vitis vinifera HOM05D043099 ORTHO05D005138 5.9e-07 58.9 291 26.8
AL4G37660 Arabidopsis lyrata HOM05D010943 ORTHO05D005138 7.7e-07 58.5 63 49.2
Haze_25248 Corylus avellana HOM05D006281 ORTHO05D005138 7.7e-07 58.5 65 47.7
COL.COLO4_25628 Corchorus olitorius HOM05D006281 ORTHO05D005138 1.3e-06 57.8 194 26.8
Glyma.18G211600 Glycine max HOM05D006281 ORTHO05D005138 1.3e-06 57.8 69 47.8
DCAR_027546 Daucus carota HOM05D000021 ORTHO05D035016 1.7e-06 57.4 88 39.8
AT1G45248 Arabidopsis thaliana HOM05D010943 ORTHO05D005138 2.2e-06 57.0 57 45.6
CARHR134980 Cardamine hirsuta HOM05D010943 ORTHO05D005138 3.8e-06 56.2 73 46.6
SEGI_11125 Sequoiadendron giganteum HOM05D006281 ORTHO05D005138 5.0e-06 55.8 65 41.5


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