Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.10G013900 Manihot esculenta HOM05D004604 ORTHO05D005744 0.0e+00 1247.3 629 100.0
Sabra10G0146600 Salix brachista HOM05D004604 ORTHO05D005744 1.6e-245 852.8 638 70.1
Potri.010G190100 Populus trichocarpa HOM05D004604 ORTHO05D005744 3.2e-241 838.6 646 68.9
Cfa001330 Carpinus fangiana HOM05D004604 ORTHO05D005744 2.8e-237 825.5 634 66.9
CSS0014761 Camellia sinensis var. sinensis HOM05D004604 ORTHO05D005744 3.7e-237 825.1 640 66.9
Gohir.A10G235000 Gossypium hirsutum HOM05D004604 ORTHO05D005744 2.6e-235 818.9 627 67.1
Atru.chr12.19 Acer truncatum HOM05D004604 ORTHO05D005744 1.7e-234 816.2 640 67.0
Thecc.10G020600 Theobroma cacao HOM05D004604 ORTHO05D005744 9.4e-233 810.4 627 66.7
TAR623G0226 Trochodendron aralioides HOM05D004604 ORTHO05D005744 7.9e-232 807.4 644 66.0
Cpa.g.sc19.189 Carica papaya HOM05D004604 ORTHO05D005744 2.3e-231 805.8 635 65.7
TWI09G1217 Tripterygium wilfordii HOM05D004604 ORTHO05D005744 5.1e-231 804.7 634 65.8
Gorai.011G285800 Gossypium raimondii HOM05D004604 ORTHO05D005744 1.1e-230 803.5 627 66.0
MD01G1132500 Malus domestica HOM05D004604 ORTHO05D005744 9.1e-228 793.9 638 65.2
MD07G1220300 Malus domestica HOM05D004604 ORTHO05D005744 7.7e-227 790.8 636 64.6
TWI73G0703 Tripterygium wilfordii HOM05D004604 ORTHO05D005744 1.3e-226 790.0 677 61.3
CiPaw.02G191600 Carya illinoinensis HOM05D004604 ORTHO05D005744 1.4e-225 786.6 641 65.1
Ciclev10030943m.g Citrus clementina HOM05D004604 ORTHO05D005744 1.8e-223 779.6 635 64.4
Prupe.2G248700 Prunus persica HOM05D004604 ORTHO05D005744 2.3e-223 779.2 641 64.6
Rhsim03G0142100 Rhododendron simsii HOM05D004604 ORTHO05D005744 3.0e-223 778.9 625 64.5
CSS0028164 Camellia sinensis var. sinensis HOM05D004604 ORTHO05D005744 5.7e-222 774.6 641 63.5
RcHm_v2.0_Chr1g0369991 Rosa chinensis HOM05D004604 ORTHO05D005744 3.1e-220 768.8 640 62.7
Glyma.18G028600 Glycine max HOM05D004604 ORTHO05D005744 1.6e-219 766.5 625 65.0
Lj1C953T18 Lonicera japonica HOM05D004604 ORTHO05D005744 2.0e-219 766.1 646 63.2
CANSAT35G0855 Cannabis sativa HOM05D004604 ORTHO05D005744 5.9e-219 764.6 625 63.5
Dinv34395 Davidia involucrata HOM05D004604 ORTHO05D005744 1.0e-218 763.8 574 69.0
FAN10G0865 Fragaria x ananassa HOM05D004604 ORTHO05D005744 1.3e-218 763.5 637 62.6
arahy.Tifrunner.gnm1.ann1.E2DHW8 Arachis hypogaea HOM05D004604 ORTHO05D005744 1.5e-217 760.0 621 61.7
FvH4_7g24330 Fragaria vesca HOM05D004604 ORTHO05D005744 1.5e-217 760.0 637 63.0
Nn2g11459 Nelumbo nucifera HOM05D004604 ORTHO05D005744 1.3e-213 746.9 635 61.7
FAN01G3126 Fragaria x ananassa HOM05D004604 ORTHO05D005744 3.7e-213 745.3 689 58.5
Psat5g126400 Pisum sativum HOM05D004604 ORTHO05D005744 2.7e-211 739.2 632 61.2
Duzib114G0112 Durio zibethinus HOM05D004604 ORTHO05D005744 5.9e-211 738.0 629 62.8
Glyma.11G228500 Glycine max HOM05D004604 ORTHO05D005744 7.7e-211 737.6 632 62.5
Phvul.001G241900 Phaseolus vulgaris HOM05D004604 ORTHO05D005744 5.0e-210 734.9 633 61.0
Lj6g0016498 Lotus japonicus HOM05D004604 ORTHO05D005744 3.2e-209 732.3 637 61.1
Ca_15268_v3 Cicer arietinum L. HOM05D004604 ORTHO05D005744 7.2e-209 731.1 637 61.9
Medtr3g070310 Medicago truncatula HOM05D004604 ORTHO05D005744 2.7e-208 729.2 638 61.3
VMungo1383G0266 Vigna mungo HOM05D004604 ORTHO05D005744 1.8e-207 726.5 633 61.8
TPR.G2507 Trifolium pratense HOM05D004604 ORTHO05D005744 1.5e-206 723.4 636 60.4
Lalb_Chr18g0052631 Lupinus albus HOM05D004604 ORTHO05D005744 4.4e-206 721.8 627 61.6
FAN06G3796 Fragaria x ananassa HOM05D004604 ORTHO05D005744 4.8e-205 718.4 600 63.2
Aqoxy4G02603 Aquilegia oxysepala HOM05D004604 ORTHO05D005744 1.8e-204 716.5 634 58.8
Lalb_Chr15g0084181 Lupinus albus HOM05D004604 ORTHO05D005744 2.4e-204 716.1 627 60.8
Sabra08G0049200 Salix brachista HOM05D004604 ORTHO05D005744 1.6e-203 713.4 580 65.0
ClCG11G006230 Citrullus lanatus HOM05D004604 ORTHO05D005744 4.5e-203 711.8 637 59.7
Cc02_g06650 Coffea canephora HOM05D004604 ORTHO05D005744 4.5e-203 711.8 625 59.0
Haze_17214 Corylus avellana HOM05D004604 ORTHO05D005744 4.5e-203 711.8 653 58.5
Eucgr.J00226 Eucalyptus grandis HOM05D004604 ORTHO05D005744 1.0e-202 710.7 648 59.3
Hma1.2p1_0446F.1_g154570 Hydrangea macrophylla HOM05D004604 ORTHO05D005744 5.5e-201 704.9 641 58.8
Potri.008G067000 Populus trichocarpa HOM05D004604 ORTHO05D005744 1.0e-199 700.7 546 66.3
Hund13846 Selenicereus undatus HOM05D004604 ORTHO05D005744 3.0e-199 699.1 644 59.0
CsaV3_6G001760 Cucumis sativus L. HOM05D004604 ORTHO05D005744 1.7e-197 693.3 638 58.6
ECA238G1235 Erigeron canadensis HOM05D004604 ORTHO05D005744 1.7e-197 693.3 619 59.6
THA.LOC104816553 Tarenaya hassleriana HOM05D004604 ORTHO05D005744 2.2e-197 693.0 629 57.6
Dinv17981 Davidia involucrata HOM05D004604 ORTHO05D005744 4.9e-197 691.8 499 70.7
Haze_17213 Corylus avellana HOM05D004604 ORTHO05D005744 2.7e-195 686.0 614 60.7
PGR044G2346 Punica granatum HOM05D004604 ORTHO05D005744 7.8e-195 684.5 627 57.7
TAR369G0014 Trochodendron aralioides HOM05D004604 ORTHO05D005744 3.8e-194 682.2 575 62.1
Peaxi162Scf00825g00019 Petunia axillaris HOM05D004604 ORTHO05D005744 7.3e-193 677.9 621 57.6
Eucgr.J00228 Eucalyptus grandis HOM05D004604 ORTHO05D005744 1.0e-191 674.1 632 57.8
MELO3C008290.2 Cucumis melo HOM05D004604 ORTHO05D005744 2.6e-190 669.5 634 57.6
PSO384G4393 Papaver somniferum HOM05D004604 ORTHO05D005744 2.6e-190 669.5 645 56.4
Eucgr.J00230 Eucalyptus grandis HOM05D004604 ORTHO05D005744 1.7e-189 666.8 623 56.8
HanXRQChr14g0459851 Helianthus annuus HOM05D004604 ORTHO05D005744 2.9e-189 666.0 647 57.0
PSO339G2357 Papaver somniferum HOM05D004604 ORTHO05D005744 1.1e-188 664.1 657 55.6
Lsat_1_v5_gn_2_122780 Lactuca sativa HOM05D004604 ORTHO05D005744 1.4e-188 663.7 649 57.0
Nitab4.5_0000802g0040 Nicotiana tabacum HOM05D004604 ORTHO05D005744 4.1e-188 662.1 623 56.3
vmacro06977 Vaccinium macrocarpon HOM05D004604 ORTHO05D005744 1.2e-187 660.6 635 55.7
GSVIVG01032843001 Vitis vinifera HOM05D004604 ORTHO05D005744 4.6e-187 658.7 635 58.4
SGA_v2.0_scaffold76G25082 Striga asiatica HOM05D004604 ORTHO05D005744 1.0e-186 657.5 642 53.9
arahy.Tifrunner.gnm1.ann1.C37ZT5 Arachis hypogaea HOM05D004604 ORTHO05D005744 2.3e-186 656.4 560 59.5
Nitab4.5_0005174g0010 Nicotiana tabacum HOM05D004604 ORTHO05D005744 5.0e-186 655.2 617 56.6
Sopen06g017720 Solanum pennellii HOM05D004604 ORTHO05D005744 5.0e-186 655.2 641 55.1
FAN03G0827 Fragaria x ananassa HOM05D004604 ORTHO05D005744 8.6e-186 654.4 709 52.8
Carub.0003s1055 Capsella rubella HOM05D004604 ORTHO05D005744 3.3e-185 652.5 635 55.4
EL10Ac2g04814 Beta vulgaris HOM05D004604 ORTHO05D005744 5.6e-185 651.7 637 55.4
PGSC0003DMG400023817 Solanum tuberosum HOM05D004604 ORTHO05D005744 1.6e-184 650.2 641 55.9
Cpa.g.sc19.187 Carica papaya HOM05D004604 ORTHO05D005744 4.0e-183 645.6 561 61.5
CAN.G17.11 Capsicum annuum HOM05D004604 ORTHO05D005744 7.5e-182 641.3 624 55.0
MSTRG.213 Avicennia marina HOM05D004604 ORTHO05D005744 1.7e-181 640.2 594 57.4
AT5G05700 Arabidopsis thaliana HOM05D004604 ORTHO05D005744 3.7e-181 639.0 654 52.9
Ah.16g103410 Amaranthus hybridus HOM05D004604 ORTHO05D005744 4.9e-181 638.6 643 54.7
Sp3g09520 Schrenkiella parvula HOM05D004604 ORTHO05D005744 1.4e-180 637.1 627 54.9
Sp6g37190 Schrenkiella parvula HOM05D004604 ORTHO05D005744 1.4e-180 637.1 631 53.7
Solyc06g051760.3 Solanum lycopersicum HOM05D004604 ORTHO05D005744 9.2e-180 634.4 644 53.6
Migut.F01373 Erythranthe guttata HOM05D004604 ORTHO05D005744 1.2e-179 634.0 613 55.0
AL6G15600 Arabidopsis lyrata HOM05D004604 ORTHO05D005744 1.6e-179 633.6 631 54.4
Aa31LG11G6730 Aethionema arabicum HOM05D004604 ORTHO05D005744 4.6e-179 632.1 627 53.3
AL3G22760 Arabidopsis lyrata HOM05D004604 ORTHO05D005744 5.0e-178 628.6 632 53.2
Migut.F01374 Erythranthe guttata HOM05D004604 ORTHO05D005744 1.1e-177 627.5 613 54.2
BcaB06g25636 Brassica carinata HOM05D004604 ORTHO05D005744 3.3e-177 625.9 628 53.7
ATR0618G256 Amborella trichopoda HOM05D004604 ORTHO05D005744 4.3e-177 625.5 652 53.7
Eucgr.J00232 Eucalyptus grandis HOM05D004604 ORTHO05D005744 2.8e-176 622.9 560 58.2
DCAR_028567 Daucus carota HOM05D004604 ORTHO05D005744 4.7e-176 622.1 588 56.3
Gohir.D10G247400 Gossypium hirsutum HOM05D004604 ORTHO05D005744 8.1e-176 621.3 515 63.5
BcaC05g29392 Brassica carinata HOM05D004604 ORTHO05D005744 1.1e-175 620.9 625 52.3
C05p56850 Brassica napus HOM05D004604 ORTHO05D005744 1.1e-175 620.9 625 52.3
HanXRQChr14g0459841 Helianthus annuus HOM05D004604 ORTHO05D005744 2.3e-175 619.8 635 53.2
BolC5t34349H Brassica oleracea HOM05D004604 ORTHO05D005744 3.1e-175 619.4 625 52.2
Cpa.g.sc19.188 Carica papaya HOM05D004604 ORTHO05D005744 1.5e-174 617.1 486 64.0
MBI05_g34496_MAGBIO Magnolia biondii HOM05D004604 ORTHO05D005744 5.8e-174 615.1 576 58.9
A10p30660 Brassica napus HOM05D004604 ORTHO05D005744 1.3e-173 614.0 624 53.0
C09p71140 Brassica napus HOM05D004604 ORTHO05D005744 1.1e-172 610.9 626 52.9
unitig_62.g23928 Utricularia gibba HOM05D004604 ORTHO05D005744 1.1e-172 610.9 655 52.2
Hund15948 Selenicereus undatus HOM05D004604 ORTHO05D005744 1.9e-172 610.1 625 53.6
A05p38060 Brassica napus HOM05D004604 ORTHO05D005744 2.1e-171 606.7 626 52.1
BraA05t22598Z Brassica rapa HOM05D004604 ORTHO05D005744 2.1e-171 606.7 626 52.1
Oeu048694.1 Olea europaea HOM05D004604 ORTHO05D005744 2.7e-171 606.3 493 64.1
BraA10t45107Z Brassica rapa HOM05D004604 ORTHO05D005744 1.3e-170 604.0 662 50.6
BolC9t59876H Brassica oleracea HOM05D004604 ORTHO05D005744 1.7e-170 603.6 626 52.4
CARHR085800 Cardamine hirsuta HOM05D004604 ORTHO05D005744 1.7e-170 603.6 629 53.1
CARHR207580 Cardamine hirsuta HOM05D004604 ORTHO05D005744 1.6e-168 597.0 602 53.0
BcaC06g32278 Brassica carinata HOM05D004604 ORTHO05D005744 2.9e-165 586.3 625 51.7
Os05g0446800 Oryza sativa ssp. japonica HOM05D004604 ORTHO05D005744 2.4e-164 583.2 639 51.8
Aa31LG3G4550 Aethionema arabicum HOM05D004604 ORTHO05D005744 1.7e-162 577.0 687 47.5
Carub.0006s0459 Capsella rubella HOM05D004604 ORTHO05D005744 1.2e-158 564.3 579 52.8
AUR62022867 Chenopodium quinoa HOM05D004604 ORTHO05D005744 2.0e-158 563.5 597 52.3
Actinidia29693 Actinidia chinensis HOM05D004604 ORTHO05D005744 1.7e-157 560.5 631 50.2
Sed0013753 Sechium edule HOM05D004604 ORTHO05D005744 2.4e-156 556.6 495 58.4
CDE03G0502 Ceratophyllum demersum HOM05D004604 ORTHO05D005744 1.8e-151 540.4 554 53.1
Sc11g0007180 Simmondsia chinensis HOM05D004604 ORTHO05D005744 6.9e-151 538.5 525 56.0
SEGI_40640 Sequoiadendron giganteum HOM05D004604 ORTHO05D005744 2.6e-150 536.6 624 48.6
Zm00001eb348230 Zea mays HOM05D004604 ORTHO05D005744 2.2e-149 533.5 527 54.1
Peaxi162Scf01208g00144 Petunia axillaris HOM05D004604 ORTHO05D005744 7.9e-147 525.0 527 54.6
Eucgr.J00227 Eucalyptus grandis HOM05D004604 ORTHO05D005744 6.4e-141 505.4 421 61.0
COL.COLO4_25696 Corchorus olitorius HOM05D004604 ORTHO05D005744 3.8e-133 479.6 627 47.4
AT3G11240 Arabidopsis thaliana HOM05D004604 ORTHO05D005744 1.9e-129 467.2 464 54.7
HanXRQChr06g0172261 Helianthus annuus HOM05D004604 ORTHO05D005744 1.9e-124 450.7 486 51.9
SEGI_28443 Sequoiadendron giganteum HOM05D004604 ORTHO05D005744 1.6e-123 447.6 462 52.2
SEGI_33236 Sequoiadendron giganteum HOM05D004604 ORTHO05D005744 1.6e-123 447.6 462 52.2
Actinidia33931 Actinidia chinensis HOM05D004604 ORTHO05D005744 3.0e-122 443.4 615 46.0
AUR62012235 Chenopodium quinoa HOM05D004604 ORTHO05D005744 2.2e-117 427.2 551 46.8
AagrBONN_evm.TU.Sc2ySwM_117.2751 Anthoceros agrestis HOM05D004604 ORTHO05D005744 6.5e-117 425.6 632 40.7
Mapoly0067s0057 Marchantia polymorpha HOM05D004604 ORTHO05D005744 7.2e-116 422.2 626 42.7
Pp3c3_24950 Physcomitrium patens HOM05D004604 ORTHO05D005744 1.5e-113 414.5 627 41.3
Thhalv10013820m.g Eutrema salsugineum HOM05D004604 ORTHO05D005744 5.3e-111 406.0 388 55.7
SMO118G0549 Selaginella moellendorffii HOM05D004604 ORTHO05D005744 8.0e-99 365.5 503 44.9
CBR_g49483 Chara braunii HOM05D004604 ORTHO05D005744 8.0e-75 285.8 497 38.0
PRCOL_00002395 Prasinoderma coloniale HOM05D004604 ORTHO05D005744 5.8e-73 279.6 662 34.1
arahy.Tifrunner.gnm1.ann1.3RRJ97 Arachis hypogaea HOM05D004604 ORTHO05D005744 1.9e-68 264.6 343 43.1
HPP92_018034 Vanilla planifolia HOM05D004604 ORTHO05D005744 3.6e-59 233.8 297 47.8
MCO15G553 Micromonas commoda HOM05D004604 ORTHO05D005744 6.2e-51 206.5 163 58.9
Cre13.g580600 Chlamydomonas reinhardtii HOM05D004604 ORTHO05D005744 5.8e-49 199.9 195 48.7
PSO339G5386 Papaver somniferum HOM05D004604 ORTHO05D005744 1.8e-42 178.3 131 66.4
Cfa022588 Carpinus fangiana HOM05D004604 ORTHO05D005744 1.5e-25 122.1 158 38.6
HPP92_018033 Vanilla planifolia HOM05D004604 ORTHO05D005744 2.9e-24 117.9 157 49.7
Peaxi162Scf01208g00156 Petunia axillaris HOM05D004604 ORTHO05D005744 4.6e-22 110.5 63 77.8
Oeu025172.2 Olea europaea HOM05D004604 ORTHO05D005744 1.6e-14 85.5 126 44.4
CBR_g49485 Chara braunii HOM05D000019 ORTHO05D000048 2.9e-08 64.7 39 71.8
SHI03466 Sapria himalayana HOM05D004604 ORTHO05D005744 1.4e-07 62.4 42 76.2
CDE04G1491 Ceratophyllum demersum HOM05D004604 ORTHO05D005744 7.2e-07 60.1 54 53.7


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