Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.10G010100 Manihot esculenta HOM05D005937 ORTHO05D008151 0.0e+00 1743.4 873 100.0
Potri.010G185800 Populus trichocarpa HOM05D005937 ORTHO05D008151 0.0e+00 1343.2 883 76.6
Atru.chr12.85 Acer truncatum HOM05D005937 ORTHO05D008151 0.0e+00 1292.3 880 73.1
TWI09G1402 Tripterygium wilfordii HOM05D005937 ORTHO05D008151 0.0e+00 1289.6 880 74.4
Sabra10G0143100 Salix brachista HOM05D005937 ORTHO05D008151 0.0e+00 1268.1 932 70.0
Thecc.10G012700 Theobroma cacao HOM05D005937 ORTHO05D008151 0.0e+00 1263.1 818 77.3
Duzib114G0783 Durio zibethinus HOM05D005937 ORTHO05D008151 0.0e+00 1262.7 882 72.8
MD07G1224900 Malus domestica HOM05D005937 ORTHO05D008151 0.0e+00 1260.7 879 73.9
Ciclev10030686m.g Citrus clementina HOM05D005937 ORTHO05D008151 0.0e+00 1245.7 885 73.0
GSVIVG01032777001 Vitis vinifera HOM05D005937 ORTHO05D008151 0.0e+00 1243.8 875 73.1
TAR633G1521 Trochodendron aralioides HOM05D005937 ORTHO05D008151 0.0e+00 1243.0 879 73.2
CSS0046957 Camellia sinensis var. sinensis HOM05D005937 ORTHO05D008151 0.0e+00 1237.6 897 72.4
QL08p063536 Quercus lobata HOM05D005937 ORTHO05D008151 0.0e+00 1236.9 881 72.3
Prupe.2G253500 Prunus persica HOM05D005937 ORTHO05D008151 0.0e+00 1231.9 877 71.0
CiPaw.02G194600 Carya illinoinensis HOM05D005937 ORTHO05D008151 0.0e+00 1231.1 872 71.0
RcHm_v2.0_Chr1g0370701 Rosa chinensis HOM05D005937 ORTHO05D008151 0.0e+00 1223.8 867 70.1
FvH4_7g24830 Fragaria vesca HOM05D005937 ORTHO05D008151 0.0e+00 1222.6 818 72.1
FAN01G2918 Fragaria x ananassa HOM05D005937 ORTHO05D008151 0.0e+00 1222.6 837 71.1
Gorai.011G291300 Gossypium raimondii HOM05D005937 ORTHO05D008151 0.0e+00 1219.1 840 73.0
Haze_17256 Corylus avellana HOM05D005937 ORTHO05D008151 0.0e+00 1217.2 884 69.5
Gohir.A10G239000 Gossypium hirsutum HOM05D005937 ORTHO05D008151 0.0e+00 1214.9 841 73.1
FAN06G2004 Fragaria x ananassa HOM05D005937 ORTHO05D008151 0.0e+00 1214.5 838 70.6
Rhsim09G0179300 Rhododendron simsii HOM05D005937 ORTHO05D008151 0.0e+00 1214.1 870 71.6
Actinidia00667 Actinidia chinensis HOM05D005937 ORTHO05D008151 0.0e+00 1212.6 876 71.6
FAN03G2902 Fragaria x ananassa HOM05D005937 ORTHO05D008151 0.0e+00 1209.1 843 70.5
Cpa.g.sc19.149 Carica papaya HOM05D005937 ORTHO05D008151 0.0e+00 1197.6 920 65.9
Nn2g10945 Nelumbo nucifera HOM05D005937 ORTHO05D008151 0.0e+00 1189.5 833 71.7
Duzib106G1087 Durio zibethinus HOM05D005937 ORTHO05D008151 0.0e+00 1187.9 875 70.9
Eucgr.J00183 Eucalyptus grandis HOM05D005937 ORTHO05D008151 0.0e+00 1180.6 819 71.3
Ca_15144_v3 Cicer arietinum L. HOM05D005937 ORTHO05D008151 0.0e+00 1176.0 830 70.4
CANSAT56G2579 Cannabis sativa HOM05D005937 ORTHO05D008151 0.0e+00 1172.9 824 70.6
Hma1.2p1_0523F.1_g172080 Hydrangea macrophylla HOM05D005937 ORTHO05D008151 0.0e+00 1169.5 815 69.9
Glyma.11G231700 Glycine max HOM05D005937 ORTHO05D008151 0.0e+00 1167.9 825 70.4
ClCG11G006010 Citrullus lanatus HOM05D005937 ORTHO05D008151 0.0e+00 1167.1 816 69.9
Migut.F01477 Erythranthe guttata HOM05D005937 ORTHO05D008151 0.0e+00 1166.8 877 66.5
Nitab4.5_0000058g0250 Nicotiana tabacum HOM05D005937 ORTHO05D008151 0.0e+00 1164.8 878 67.7
Phvul.001G244900 Phaseolus vulgaris HOM05D005937 ORTHO05D008151 0.0e+00 1162.1 824 68.8
Nitab4.5_0000969g0030 Nicotiana tabacum HOM05D005937 ORTHO05D008151 0.0e+00 1160.2 878 67.3
CsaV3_6G001960 Cucumis sativus L. HOM05D005937 ORTHO05D008151 0.0e+00 1156.7 815 69.7
VMungo1383G1379 Vigna mungo HOM05D005937 ORTHO05D008151 0.0e+00 1151.3 870 67.4
Psat5g130440 Pisum sativum HOM05D005937 ORTHO05D008151 0.0e+00 1150.6 822 69.7
Solyc06g051080.4 Solanum lycopersicum HOM05D005937 ORTHO05D008151 0.0e+00 1150.6 878 67.1
Medtr3g071440 Medicago truncatula HOM05D005937 ORTHO05D008151 0.0e+00 1145.2 839 68.7
Sopen06g016900 Solanum pennellii HOM05D005937 ORTHO05D008151 0.0e+00 1144.8 878 66.7
Sed0020446 Sechium edule HOM05D005937 ORTHO05D008151 0.0e+00 1144.0 856 67.1
CAN.G19.18 Capsicum annuum HOM05D005937 ORTHO05D008151 0.0e+00 1143.3 873 67.4
Glyma.18G025500 Glycine max HOM05D005937 ORTHO05D008151 0.0e+00 1142.1 865 67.3
Lalb_Chr23g0277021 Lupinus albus HOM05D005937 ORTHO05D008151 0.0e+00 1142.1 889 64.8
Oeu011112.1 Olea europaea HOM05D005937 ORTHO05D008151 0.0e+00 1141.7 977 61.9
Hund15900 Selenicereus undatus HOM05D005937 ORTHO05D008151 0.0e+00 1141.3 838 67.3
Lj1C959G18 Lonicera japonica HOM05D005937 ORTHO05D008151 0.0e+00 1138.3 764 73.7
Ah.16g103770 Amaranthus hybridus HOM05D005937 ORTHO05D008151 0.0e+00 1135.9 883 65.0
THA.LOC104824329 Tarenaya hassleriana HOM05D005937 ORTHO05D008151 0.0e+00 1135.2 879 63.8
TPR.G10616 Trifolium pratense HOM05D005937 ORTHO05D008151 0.0e+00 1135.2 820 68.7
THA.LOC104811372 Tarenaya hassleriana HOM05D005937 ORTHO05D008151 0.0e+00 1134.4 819 66.9
arahy.Tifrunner.gnm1.ann1.0WF02T Arachis hypogaea HOM05D005937 ORTHO05D008151 0.0e+00 1130.2 821 67.2
arahy.Tifrunner.gnm1.ann1.6RBS9T Arachis hypogaea HOM05D005937 ORTHO05D008151 0.0e+00 1129.8 821 67.4
vmacro10023 Vaccinium macrocarpon HOM05D005937 ORTHO05D008151 0.0e+00 1129.4 912 65.0
Aa31LG10G10960 Aethionema arabicum HOM05D005937 ORTHO05D008151 0.0e+00 1127.5 859 64.1
A09p48990 Brassica napus HOM05D005937 ORTHO05D008151 0.0e+00 1125.9 883 64.0
BraA09t40354Z Brassica rapa HOM05D005937 ORTHO05D008151 0.0e+00 1125.9 883 64.0
Thhalv10005783m.g Eutrema salsugineum HOM05D005937 ORTHO05D008151 0.0e+00 1125.5 891 63.0
CARHR166110 Cardamine hirsuta HOM05D005937 ORTHO05D008151 0.0e+00 1124.8 879 63.4
Sp5g06500 Schrenkiella parvula HOM05D005937 ORTHO05D008151 0.0e+00 1124.4 893 62.9
AT3G56040 Arabidopsis thaliana HOM05D005937 ORTHO05D008151 0.0e+00 1124.0 888 63.0
C08p31350 Brassica napus HOM05D005937 ORTHO05D008151 0.0e+00 1124.0 885 63.6
Lj6g0019628 Lotus japonicus HOM05D005937 ORTHO05D008151 0.0e+00 1118.2 853 66.5
AL5G37310 Arabidopsis lyrata HOM05D005937 ORTHO05D008151 0.0e+00 1117.4 890 62.2
EL10Ac2g04871 Beta vulgaris HOM05D005937 ORTHO05D008151 0.0e+00 1117.4 931 61.4
Dinv21757 Davidia involucrata HOM05D005937 ORTHO05D008151 0.0e+00 1112.1 889 67.5
Carub.0005s2277 Capsella rubella HOM05D005937 ORTHO05D008151 0.0e+00 1110.9 879 61.8
Cfa001293 Carpinus fangiana HOM05D005937 ORTHO05D008151 0.0e+00 1099.7 695 77.7
FAN10G1632 Fragaria x ananassa HOM05D005937 ORTHO05D008151 0.0e+00 1095.9 833 66.7
Aqoxy4G02431 Aquilegia oxysepala HOM05D005937 ORTHO05D008151 0.0e+00 1093.6 818 67.7
HanXRQChr07g0203141 Helianthus annuus HOM05D005937 ORTHO05D008151 0.0e+00 1084.7 884 64.3
Lsat_1_v5_gn_2_123720 Lactuca sativa HOM05D005937 ORTHO05D008151 0.0e+00 1079.7 843 64.5
PSO017G4998 Papaver somniferum HOM05D005937 ORTHO05D008151 0.0e+00 1075.8 821 66.9
unitig_60.g25670 Utricularia gibba HOM05D005937 ORTHO05D008151 1.2e-310 1069.7 830 65.1
DCAR_024814 Daucus carota HOM05D005937 ORTHO05D008151 2.0e-310 1068.9 812 67.5
ECA238G3710 Erigeron canadensis HOM05D005937 ORTHO05D008151 1.3e-309 1066.2 877 64.2
PSO170G3027 Papaver somniferum HOM05D005937 ORTHO05D008151 3.8e-309 1064.7 837 65.8
AUR62012278 Chenopodium quinoa HOM05D005937 ORTHO05D008151 7.2e-308 1060.4 821 63.8
Gohir.D10G250900 Gossypium hirsutum HOM05D005937 ORTHO05D008151 2.1e-307 1058.9 724 73.5
PGR044G1548 Punica granatum HOM05D005937 ORTHO05D008151 6.7e-306 1053.9 861 63.5
Peaxi162Scf00284g00620 Petunia axillaris HOM05D005937 ORTHO05D008151 6.5e-301 1037.3 865 63.6
ATR0174G021 Amborella trichopoda HOM05D005937 ORTHO05D008151 1.0e-293 1013.4 857 60.0
MELO3C008313.2 Cucumis melo HOM05D005937 ORTHO05D008151 5.2e-290 1001.1 707 70.4
Cc02_g06180 Coffea canephora HOM05D005937 ORTHO05D008151 9.8e-289 996.9 641 74.9
AUR62022920 Chenopodium quinoa HOM05D005937 ORTHO05D008151 3.1e-287 991.9 743 65.5
MD01G1156200 Malus domestica HOM05D005937 ORTHO05D008151 1.2e-286 989.9 701 70.6
COL.COLO4_25772 Corchorus olitorius HOM05D005937 ORTHO05D008151 6.6e-285 984.2 785 66.0
MBI15_g40751_MAGBIO Magnolia biondii HOM05D005937 ORTHO05D008151 7.3e-284 980.7 898 60.6
Os05g0468600 Oryza sativa ssp. japonica HOM05D005937 ORTHO05D008151 1.0e-277 960.3 802 59.1
Zm00001eb351780 Zea mays HOM05D005937 ORTHO05D008151 3.2e-271 938.7 839 56.0
Sc10g0002520 Simmondsia chinensis HOM05D005937 ORTHO05D008151 6.6e-269 931.0 689 68.9
SGA_v2.0_scaffold395G50730 Striga asiatica HOM05D005937 ORTHO05D008151 3.1e-250 869.0 744 61.7
AagrBONN_evm.TU.Sc2ySwM_368.2798 Anthoceros agrestis HOM05D005937 ORTHO05D008151 2.3e-245 852.8 827 50.8
Pp3c22_15610 Physcomitrium patens HOM05D005937 ORTHO05D008151 2.5e-236 822.8 843 50.2
Mapoly0007s0127 Marchantia polymorpha HOM05D005937 ORTHO05D008151 3.8e-232 808.9 860 47.8
SMO141G0067 Selaginella moellendorffii HOM05D005937 ORTHO05D008151 5.0e-216 755.4 745 51.0
HPP92_007567 Vanilla planifolia HOM05D005937 ORTHO05D008151 9.4e-199 698.0 800 50.4
Hma1.2p1_0523F.1_g172070 Hydrangea macrophylla HOM05D005937 ORTHO05D008151 1.5e-196 690.6 496 69.2
CBR_g61489 Chara braunii HOM05D005937 ORTHO05D008151 3.2e-183 646.4 574 52.6
Actinidia00964 Actinidia chinensis HOM05D005937 ORTHO05D008151 5.7e-180 635.6 481 66.5
PRCOL_00004696 Prasinoderma coloniale HOM05D005937 ORTHO05D008151 3.2e-154 550.1 816 39.2
CDE04G2743 Ceratophyllum demersum HOM05D005937 ORTHO05D008151 5.6e-151 539.3 550 53.5
Cre12.g554250 Chlamydomonas reinhardtii HOM05D005937 ORTHO05D008151 2.6e-148 530.4 796 37.9
RhsimUnG0153700 Rhododendron simsii HOM05D005937 ORTHO05D008151 1.6e-121 441.4 300 72.7
BcaB01g00040 Brassica carinata HOM05D005937 ORTHO05D008151 3.7e-118 430.3 406 57.1
HPP92_007578 Vanilla planifolia HOM05D005937 ORTHO05D008151 9.0e-117 425.6 413 54.5
Rhsim12G0073000 Rhododendron simsii HOM05D005937 ORTHO05D008151 2.5e-114 417.5 299 69.9
SEGI_34891 Sequoiadendron giganteum HOM05D005937 ORTHO05D008151 9.1e-93 345.9 253 67.2
Aqoxy1G01260 Aquilegia oxysepala HOM05D005937 ORTHO05D008151 2.2e-91 341.3 197 78.2
Aqoxy2G01148 Aquilegia oxysepala HOM05D005937 ORTHO05D008151 6.5e-91 339.7 188 81.4
CDE04G2646 Ceratophyllum demersum HOM05D005937 ORTHO05D008151 1.1e-90 339.0 246 64.6
Aqoxy4G01451 Aquilegia oxysepala HOM05D005937 ORTHO05D008151 3.2e-90 337.4 186 81.7
HPP92_007579 Vanilla planifolia HOM05D005937 ORTHO05D008151 7.2e-82 309.7 217 67.7
MCO05G015 Micromonas commoda HOM05D005937 ORTHO05D008151 7.5e-71 273.1 388 38.9
BolC8t50756H Brassica oleracea HOM05D005937 ORTHO05D008151 8.5e-67 259.6 203 57.6
Ah.00g001390 Amaranthus hybridus HOM05D005937 ORTHO05D008151 3.0e-43 181.4 147 56.5
SEGI_09306 Sequoiadendron giganteum HOM05D005937 ORTHO05D008151 1.1e-37 162.9 144 48.6
vmacro09901 Vaccinium macrocarpon HOM05D003975 ORTHO05D009762 6.0e-28 130.6 163 42.9
Aqoxy4G01461 Aquilegia oxysepala HOM05D005937 ORTHO05D026713 2.4e-24 118.6 176 45.5
Hund15853 Selenicereus undatus HOM05D005937 ORTHO05D026713 4.6e-12 77.8 107 42.1
Aqoxy4G00767 Aquilegia oxysepala HOM05D005937 ORTHO05D026713 1.8e-11 75.9 94 47.9
SEGI_37602 Sequoiadendron giganteum HOM05D005937 ORTHO05D026713 9.6e-10 70.1 188 30.9
Rhsim12G0072900 Rhododendron simsii HOM05D005937 ORTHO05D008151 2.8e-09 68.6 53 71.7


User provided reference genes

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