Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.10G008100 Manihot esculenta HOM05D006653 ORTHO05D008346 3.9e-119 431.4 206 100.0
Potri.008G073200 Populus trichocarpa HOM05D006653 ORTHO05D008346 1.6e-88 329.7 207 75.4
Sabra08G0054400 Salix brachista HOM05D006653 ORTHO05D008346 2.8e-85 318.9 220 71.4
Hma1.2p1_1013F.1_g247760 Hydrangea macrophylla HOM05D006653 ORTHO05D008346 4.2e-81 305.1 206 67.5
Glyma.18G024100 Glycine max HOM05D006653 ORTHO05D008346 1.6e-80 303.1 206 67.0
Actinidia29724 Actinidia chinensis HOM05D006653 ORTHO05D008346 2.1e-80 302.8 206 67.0
Nn2g13243 Nelumbo nucifera HOM05D006653 ORTHO05D008346 2.1e-80 302.8 207 67.6
TWI53G0670 Tripterygium wilfordii HOM05D006653 ORTHO05D008346 3.5e-80 302.0 206 68.0
Thecc.10G010700 Theobroma cacao HOM05D006653 ORTHO05D008346 4.6e-80 301.6 206 67.5
Haze_17274 Corylus avellana HOM05D006653 ORTHO05D008346 1.0e-79 300.4 207 68.6
CiPaw.01G301500 Carya illinoinensis HOM05D006653 ORTHO05D008346 1.3e-79 300.1 207 67.6
Haze_17283 Corylus avellana HOM05D006653 ORTHO05D008346 1.3e-79 300.1 207 68.6
Duzib106G1369 Durio zibethinus HOM05D006653 ORTHO05D008346 1.8e-79 299.7 206 66.5
Cfa001271 Carpinus fangiana HOM05D006653 ORTHO05D008346 3.9e-79 298.5 207 68.6
Prupe.2G256500 Prunus persica HOM05D006653 ORTHO05D008346 1.5e-78 296.6 207 70.0
CSS0019013 Camellia sinensis var. sinensis HOM05D006653 ORTHO05D008346 1.9e-78 296.2 206 65.5
QL08p063830 Quercus lobata HOM05D006653 ORTHO05D008346 1.9e-78 296.2 205 65.4
Dinv21781 Davidia involucrata HOM05D006653 ORTHO05D008346 3.3e-78 295.4 206 67.0
Cc02_g06010 Coffea canephora HOM05D006653 ORTHO05D008346 5.7e-78 294.7 206 63.6
Lalb_Chr23g0277111 Lupinus albus HOM05D006653 ORTHO05D008346 2.1e-77 292.7 206 62.6
Phvul.001G246100 Phaseolus vulgaris HOM05D006653 ORTHO05D008346 2.8e-77 292.4 206 65.5
GSVIVG01032749001 Vitis vinifera HOM05D006653 ORTHO05D008346 2.8e-77 292.4 206 66.0
CANSAT56G3810 Cannabis sativa HOM05D006653 ORTHO05D008346 1.1e-76 290.4 206 66.0
Aqoxy2G00794 Aquilegia oxysepala HOM05D006653 ORTHO05D008346 1.4e-76 290.0 206 64.1
MD01G1158200 Malus domestica HOM05D006653 ORTHO05D008346 6.9e-76 287.7 207 69.1
Psat5g130600 Pisum sativum HOM05D006653 ORTHO05D008346 1.2e-75 287.0 206 63.1
Ca_15156_v3 Cicer arietinum L. HOM05D006653 ORTHO05D008346 1.5e-75 286.6 206 64.6
DCAR_011848 Daucus carota HOM05D006653 ORTHO05D008346 2.0e-75 286.2 206 65.0
THA.LOC104810122 Tarenaya hassleriana HOM05D006653 ORTHO05D008346 2.6e-75 285.8 206 63.6
Migut.F00634 Erythranthe guttata HOM05D006653 ORTHO05D008346 3.4e-75 285.4 206 64.1
Gorai.011G290500 Gossypium raimondii HOM05D006653 ORTHO05D008346 3.4e-75 285.4 204 62.7
Gohir.A10G238200 Gossypium hirsutum HOM05D006653 ORTHO05D008346 4.5e-75 285.0 204 62.7
Atru.chr12.104 Acer truncatum HOM05D006653 ORTHO05D008346 5.9e-75 284.6 197 67.5
Gohir.D10G250100 Gossypium hirsutum HOM05D006653 ORTHO05D008346 7.6e-75 284.3 204 62.3
Lj6g0008682 Lotus japonicus HOM05D006653 ORTHO05D008346 7.6e-75 284.3 206 64.1
PSO801G0584 Papaver somniferum HOM05D006653 ORTHO05D008346 1.7e-74 283.1 207 62.3
Peaxi162Scf01149g00326 Petunia axillaris HOM05D006653 ORTHO05D008346 2.9e-74 282.3 206 62.6
Oeu001415.1 Olea europaea HOM05D006653 ORTHO05D008346 3.8e-74 282.0 206 62.6
Medtr3g071640 Medicago truncatula HOM05D006653 ORTHO05D008346 5.0e-74 281.6 206 61.7
CsaV3_5G010530 Cucumis sativus L. HOM05D006653 ORTHO05D008346 6.5e-74 281.2 206 64.1
MSTRG.27303 Avicennia marina HOM05D006653 ORTHO05D008346 8.5e-74 280.8 206 62.1
SalBow3G2417 Salvia bowleyana HOM05D006653 ORTHO05D008346 1.1e-73 280.4 206 63.6
SalBow3G2982 Salvia bowleyana HOM05D006653 ORTHO05D008346 1.1e-73 280.4 206 63.6
PSO339G4279 Papaver somniferum HOM05D006653 ORTHO05D008346 1.4e-73 280.0 207 61.8
FvH4_7g25140 Fragaria vesca HOM05D006653 ORTHO05D008346 1.9e-73 279.6 206 65.0
Eucgr.G03091 Eucalyptus grandis HOM05D006653 ORTHO05D008346 1.6e-72 276.6 206 60.7
MELO3C034224.2 Cucumis melo HOM05D006653 ORTHO05D008346 2.7e-72 275.8 206 63.1
Sp4g22650 Schrenkiella parvula HOM05D006653 ORTHO05D008346 2.7e-72 275.8 206 61.2
Duzib114G1011 Durio zibethinus HOM05D006653 ORTHO05D008346 7.9e-72 274.2 192 67.2
FAN06G1821 Fragaria x ananassa HOM05D006653 ORTHO05D008346 1.3e-71 273.5 213 62.9
AL4G38130 Arabidopsis lyrata HOM05D006653 ORTHO05D008346 1.8e-71 273.1 206 61.2
FAN01G0493 Fragaria x ananassa HOM05D006653 ORTHO05D008346 1.8e-71 273.1 213 62.0
CAN.G203.2 Capsicum annuum HOM05D006653 ORTHO05D008346 3.9e-71 271.9 206 60.7
CARHR135400 Cardamine hirsuta HOM05D006653 ORTHO05D008346 3.9e-71 271.9 206 61.2
Sed0010106 Sechium edule HOM05D006653 ORTHO05D008346 3.9e-71 271.9 206 62.6
SGA_v2.0_scaffold60G20961 Striga asiatica HOM05D006653 ORTHO05D008346 5.1e-71 271.6 206 62.6
BcaC02g12146 Brassica carinata HOM05D006653 ORTHO05D008346 6.7e-71 271.2 204 59.8
C04p07070 Brassica napus HOM05D006653 ORTHO05D008346 6.7e-71 271.2 204 59.8
MD07G1226900 Malus domestica HOM05D006653 ORTHO05D008346 1.1e-70 270.4 207 65.7
Thhalv10017062m.g Eutrema salsugineum HOM05D006653 ORTHO05D008346 1.5e-70 270.0 206 60.2
Ciclev10032369m.g Citrus clementina HOM05D006653 ORTHO05D008346 1.9e-70 269.6 206 59.2
Nitab4.5_0003391g0090 Nicotiana tabacum HOM05D006653 ORTHO05D008346 1.9e-70 269.6 203 59.6
Nitab4.5_0000789g0140 Nicotiana tabacum HOM05D006653 ORTHO05D008346 2.5e-70 269.2 205 60.0
Sopen05g030990 Solanum pennellii HOM05D006653 ORTHO05D008346 3.3e-70 268.9 206 60.2
Solyc05g052460.3 Solanum lycopersicum HOM05D006653 ORTHO05D008346 5.7e-70 268.1 205 60.0
Aa31LG5G19250 Aethionema arabicum HOM05D006653 ORTHO05D008346 9.7e-70 267.3 206 59.7
AT2G40316 Arabidopsis thaliana HOM05D006653 ORTHO05D008346 9.7e-70 267.3 206 59.7
Carub.0004s2256 Capsella rubella HOM05D006653 ORTHO05D008346 2.2e-69 266.2 206 58.7
A05p06130 Brassica napus HOM05D006653 ORTHO05D008346 4.8e-69 265.0 204 58.8
Rhsim03G0147300 Rhododendron simsii HOM05D006653 ORTHO05D008346 1.8e-68 263.1 242 53.3
RcHm_v2.0_Chr1g0371041 Rosa chinensis HOM05D006653 ORTHO05D008346 1.8e-68 263.1 213 60.6
Lsat_1_v5_gn_8_12960 Lactuca sativa HOM05D006653 ORTHO05D008346 5.3e-68 261.5 207 59.9
Sc10g0002660 Simmondsia chinensis HOM05D006653 ORTHO05D008346 2.0e-67 259.6 206 60.2
vmacro06946 Vaccinium macrocarpon HOM05D006653 ORTHO05D008346 2.0e-67 259.6 230 56.1
Lj8C62G17 Lonicera japonica HOM05D006653 ORTHO05D008346 5.9e-67 258.1 205 61.0
BcaB02g09031 Brassica carinata HOM05D006653 ORTHO05D008346 1.3e-66 256.9 205 59.0
ECA233G2660 Erigeron canadensis HOM05D006653 ORTHO05D008346 2.9e-66 255.8 207 57.5
HanXRQChr17g0560871 Helianthus annuus HOM05D006653 ORTHO05D008346 2.9e-66 255.8 208 59.1
arahy.Tifrunner.gnm1.ann1.CC0JZ8 Arachis hypogaea HOM05D006653 ORTHO05D008346 6.5e-66 254.6 264 48.5
BolC4t22332H Brassica oleracea HOM05D006653 ORTHO05D008346 4.6e-64 248.4 179 62.0
TAR633G2597 Trochodendron aralioides HOM05D006653 ORTHO05D008346 7.9e-64 247.7 180 61.7
EL10Ac2g04898 Beta vulgaris HOM05D006653 ORTHO05D008346 1.4e-63 246.9 206 55.8
FAN03G1392 Fragaria x ananassa HOM05D006653 ORTHO05D008346 3.0e-63 245.7 206 58.7
BraA05t19578Z Brassica rapa HOM05D006653 ORTHO05D008346 6.7e-63 244.6 179 61.5
HPP92_000719 Vanilla planifolia HOM05D006653 ORTHO05D008346 2.0e-62 243.0 203 55.2
ATR0174G059 Amborella trichopoda HOM05D006653 ORTHO05D008346 5.7e-62 241.5 206 54.9
FAN10G0035 Fragaria x ananassa HOM05D006653 ORTHO05D008346 5.7e-62 241.5 206 57.8
Ah.10g036190 Amaranthus hybridus HOM05D006653 ORTHO05D008346 2.8e-61 239.2 206 54.4
PGR142G3637 Punica granatum HOM05D006653 ORTHO05D008346 3.7e-61 238.8 180 59.4
Lsat_1_v5_gn_9_60841 Lactuca sativa HOM05D006653 ORTHO05D008346 1.4e-60 236.9 207 55.1
VMungo1383G0363 Vigna mungo HOM05D006653 ORTHO05D008346 1.8e-60 236.5 170 65.3
TPR.G27742 Trifolium pratense HOM05D006653 ORTHO05D008346 2.4e-60 236.1 301 42.9
ECA232G4592 Erigeron canadensis HOM05D006653 ORTHO05D008346 3.1e-60 235.7 236 49.6
HanXRQChr09g0253161 Helianthus annuus HOM05D006653 ORTHO05D008346 4.5e-59 231.9 206 53.9
ClCG07G004590 Citrullus lanatus HOM05D006653 ORTHO05D008346 3.8e-58 228.8 202 56.9
PGR142G1681 Punica granatum HOM05D006653 ORTHO05D008346 5.0e-58 228.4 183 57.9
arahy.Tifrunner.gnm1.ann1.WF4WBF Arachis hypogaea HOM05D006653 ORTHO05D008346 3.7e-53 212.2 217 50.7
Hund13903 Selenicereus undatus HOM05D006653 ORTHO05D008346 1.2e-51 207.2 187 51.9
AUR62022948 Chenopodium quinoa HOM05D006653 ORTHO05D008346 2.6e-46 189.5 163 55.8
Glyma.11G233000 Glycine max HOM05D006653 ORTHO05D008346 2.8e-45 186.0 138 62.3
PGSC0003DMG400027171 Solanum tuberosum HOM05D006653 ORTHO05D008346 2.8e-45 186.0 164 54.9
AUR62012309 Chenopodium quinoa HOM05D000043 ORTHO05D003538 2.7e-40 169.5 211 44.1
MBI03_g37948_MAGBIO Magnolia biondii HOM05D006653 ORTHO05D008346 2.7e-40 169.5 272 36.4
Pp3c11_970 Physcomitrium patens HOM05D006653 ORTHO05D008346 2.3e-39 166.4 210 41.4
Zm00001eb013720 Zea mays HOM05D006653 ORTHO05D008346 7.5e-38 161.4 141 54.6
Mapoly0095s0003 Marchantia polymorpha HOM05D006653 ORTHO05D008346 3.7e-37 159.1 202 40.6
Pp3c2_28750 Physcomitrium patens HOM05D006653 ORTHO05D008346 3.5e-35 152.5 181 42.0
Manes.07G074522 Manihot esculenta HOM05D006653 ORTHO05D008346 1.5e-33 147.1 92 76.1
CDE06G2038 Ceratophyllum demersum HOM05D006653 ORTHO05D008346 8.0e-32 141.4 137 52.6
SMO203G0248 Selaginella moellendorffii HOM05D006653 ORTHO05D008346 9.8e-30 134.4 180 42.8
COL.COLO4_25792 Corchorus olitorius HOM05D006653 ORTHO05D008346 3.0e-23 112.8 95 60.0
Manes.04G030750 Manihot esculenta HOM05D006653 ORTHO05D008346 5.2e-23 112.1 64 82.8
AagrBONN_evm.TU.Sc2ySwM_362.1315 Anthoceros agrestis HOM05D006653 ORTHO05D008346 1.1e-20 104.4 103 46.6
Cpa.g.sc19.127 Carica papaya HOM05D006653 ORTHO05D008346 1.7e-18 97.1 54 74.1
Dinv10585 Davidia involucrata HOM05D006653 ORTHO05D008346 2.3e-18 96.7 59 69.5
SEGI_38425 Sequoiadendron giganteum HOM05D006653 ORTHO05D008346 1.5e-17 94.0 71 50.7
Manes.07G134901 Manihot esculenta HOM05D006653 ORTHO05D008346 4.7e-16 89.0 119 47.1
SHI28813 Sapria himalayana HOM05D006653 ORTHO05D008346 1.5e-14 84.0 129 37.2
HanXRQChr08g0221951 Helianthus annuus HOM05D006653 ORTHO05D008346 1.7e-10 70.5 95 44.2
HanXRQChr08g0221941 Helianthus annuus HOM05D006653 ORTHO05D008346 3.4e-06 56.2 68 45.6
CDE04G0201 Ceratophyllum demersum HOM05D002034 ORTHO05D006399 5.8e-06 55.5 40 62.5


User provided reference genes

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