Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.10G004900 Manihot esculenta HOM05D006817 ORTHO05D008603 2.3e-252 875.2 469 100.0
Potri.019G048700 Populus trichocarpa HOM05D006817 ORTHO05D008603 8.6e-191 670.6 502 74.1
TAR623G0065 Trochodendron aralioides HOM05D006817 ORTHO05D008603 3.5e-184 648.7 501 72.3
GSVIVG01032704001 Vitis vinifera HOM05D006817 ORTHO05D008603 1.2e-181 640.2 499 72.5
CSS0030257 Camellia sinensis var. sinensis HOM05D006817 ORTHO05D008603 4.7e-181 638.3 503 72.0
TWI09G1614 Tripterygium wilfordii HOM05D006817 ORTHO05D008603 5.3e-180 634.8 500 70.8
Actinidia00992 Actinidia chinensis HOM05D006817 ORTHO05D008603 1.5e-179 633.3 501 70.3
MD01G1164100 Malus domestica HOM05D006817 ORTHO05D008603 1.9e-177 626.3 498 69.9
Prupe.2G261900 Prunus persica HOM05D006817 ORTHO05D008603 1.9e-177 626.3 500 70.2
Thecc.10G176900 Theobroma cacao HOM05D006817 ORTHO05D008603 3.5e-176 622.1 505 68.9
Ciclev10031264m.g Citrus clementina HOM05D006817 ORTHO05D008603 6.6e-175 617.8 508 68.5
Eucgr.J00131 Eucalyptus grandis HOM05D006817 ORTHO05D008603 6.6e-175 617.8 495 69.5
Sopen06g015650 Solanum pennellii HOM05D006817 ORTHO05D008603 1.1e-174 617.1 497 69.6
PGR044G0301 Punica granatum HOM05D006817 ORTHO05D008603 1.5e-174 616.7 499 69.3
Gohir.A10G180300 Gossypium hirsutum HOM05D006817 ORTHO05D008603 1.9e-174 616.3 504 68.5
Atru.chr12.157 Acer truncatum HOM05D006817 ORTHO05D008603 5.6e-174 614.8 505 68.5
Solyc06g050210.3 Solanum lycopersicum HOM05D006817 ORTHO05D008603 5.6e-174 614.8 497 69.2
Gorai.011G210100 Gossypium raimondii HOM05D006817 ORTHO05D008603 8.1e-173 610.9 504 67.9
Migut.F00593 Erythranthe guttata HOM05D006817 ORTHO05D008603 2.4e-172 609.4 499 68.3
Rhsim09G0184300 Rhododendron simsii HOM05D006817 ORTHO05D008603 2.0e-171 606.3 508 68.9
CAN.G169.4 Capsicum annuum HOM05D006817 ORTHO05D008603 9.9e-171 604.0 501 67.7
Nitab4.5_0011715g0010 Nicotiana tabacum HOM05D006817 ORTHO05D008603 9.9e-171 604.0 501 67.1
Peaxi162Scf00739g00017 Petunia axillaris HOM05D006817 ORTHO05D008603 1.7e-170 603.2 519 66.3
Lj5g0023407 Lotus japonicus HOM05D006817 ORTHO05D008603 3.8e-170 602.1 497 67.0
Nn2g10348 Nelumbo nucifera HOM05D006817 ORTHO05D008603 6.0e-168 594.7 497 66.6
Oeu036532.1 Olea europaea HOM05D006817 ORTHO05D008603 1.0e-167 594.0 499 68.1
Aqoxy4G02362 Aquilegia oxysepala HOM05D006817 ORTHO05D008603 1.8e-167 593.2 500 67.0
ClCG07G004850 Citrullus lanatus HOM05D006817 ORTHO05D008603 6.7e-167 591.3 503 66.0
Cc02_g05530 Coffea canephora HOM05D006817 ORTHO05D008603 6.7e-167 591.3 500 66.8
CsaV3_5G010750 Cucumis sativus L. HOM05D006817 ORTHO05D008603 6.7e-167 591.3 504 65.5
PSO170G5674 Papaver somniferum HOM05D006817 ORTHO05D008603 6.7e-167 591.3 497 67.6
MSTRG.27274 Avicennia marina HOM05D006817 ORTHO05D008603 8.7e-167 590.9 499 66.7
Glyma.19G067100 Glycine max HOM05D006817 ORTHO05D008603 5.6e-166 588.2 499 67.3
Gohir.D10G187300 Gossypium hirsutum HOM05D006817 ORTHO05D008603 1.6e-165 586.6 504 65.9
COL.COLO4_10038 Corchorus olitorius HOM05D006817 ORTHO05D008603 2.8e-165 585.9 487 67.8
Sed0020006 Sechium edule HOM05D006817 ORTHO05D008603 6.2e-165 584.7 505 65.7
arahy.Tifrunner.gnm1.ann1.6ZT9VY Arachis hypogaea HOM05D006817 ORTHO05D008603 8.1e-165 584.3 498 65.5
MELO3C020113.2 Cucumis melo HOM05D006817 ORTHO05D008603 1.1e-164 583.9 506 64.8
vmacro09974 Vaccinium macrocarpon HOM05D006817 ORTHO05D008603 1.1e-164 583.9 514 66.5
arahy.Tifrunner.gnm1.ann1.6QBV89 Arachis hypogaea HOM05D006817 ORTHO05D008603 4.0e-164 582.0 498 65.3
Phvul.001G074700 Phaseolus vulgaris HOM05D006817 ORTHO05D008603 9.0e-164 580.9 497 66.4
TPR.G24539 Trifolium pratense HOM05D006817 ORTHO05D008603 9.0e-164 580.9 497 65.6
Psat6g035880 Pisum sativum HOM05D006817 ORTHO05D008603 5.8e-163 578.2 497 64.8
THA.LOC104816518 Tarenaya hassleriana HOM05D006817 ORTHO05D008603 3.8e-162 575.5 497 64.2
Medtr1g007630 Medicago truncatula HOM05D006817 ORTHO05D008603 1.2e-160 570.5 498 64.5
Sp6g37510 Schrenkiella parvula HOM05D006817 ORTHO05D008603 5.1e-159 565.1 502 63.5
MBI15_g27349_MAGBIO Magnolia biondii HOM05D006817 ORTHO05D008603 1.9e-158 563.1 566 59.7
Thhalv10013352m.g Eutrema salsugineum HOM05D006817 ORTHO05D008603 3.3e-158 562.4 496 63.9
Dinv21831 Davidia involucrata HOM05D004766 ORTHO05D006159 6.2e-157 558.1 501 66.1
Sabra19G0058300 Salix brachista HOM05D000055 ORTHO05D000057 8.2e-157 557.8 470 68.1
EL10Ac2g04256 Beta vulgaris HOM05D006817 ORTHO05D008603 3.1e-156 555.8 497 62.4
ECA232G4264 Erigeron canadensis HOM05D006817 ORTHO05D008603 4.0e-156 555.4 502 62.0
Cpa.g.sc19.86 Carica papaya HOM05D006817 ORTHO05D008603 1.2e-155 553.9 498 62.9
Lsat_1_v5_gn_9_59361 Lactuca sativa HOM05D006817 ORTHO05D008603 1.3e-154 550.4 505 61.6
BcaC06g32240 Brassica carinata HOM05D006817 ORTHO05D008603 2.2e-154 549.7 498 61.6
Sc11g0005730 Simmondsia chinensis HOM05D006817 ORTHO05D008603 2.2e-154 549.7 493 64.1
A10p30880 Brassica napus HOM05D006817 ORTHO05D008603 3.2e-153 545.8 496 61.9
C09p71390 Brassica napus HOM05D006817 ORTHO05D008603 7.1e-153 544.7 498 61.4
BolC9t59902H Brassica oleracea HOM05D006817 ORTHO05D008603 1.6e-152 543.5 503 61.0
ATR0681G057 Amborella trichopoda HOM05D006817 ORTHO05D008603 4.6e-152 542.0 498 63.3
BraA10t45133Z Brassica rapa HOM05D006817 ORTHO05D008603 1.3e-151 540.4 503 61.4
Ah.16g104230 Amaranthus hybridus HOM05D006817 ORTHO05D008603 1.8e-151 540.0 524 61.1
FAN03G2834 Fragaria x ananassa HOM05D006817 ORTHO05D008603 3.9e-151 538.9 546 59.7
CDE04G2280 Ceratophyllum demersum HOM05D006817 ORTHO05D008603 8.7e-151 537.7 497 60.2
Cfa001223 Carpinus fangiana HOM05D006817 ORTHO05D008603 1.9e-150 536.6 444 69.8
QL08p064576 Quercus lobata HOM05D006817 ORTHO05D008603 4.3e-150 535.4 460 67.4
DCAR_014588 Daucus carota HOM05D006817 ORTHO05D008603 5.7e-150 535.0 488 63.9
Lalb_Chr22g0360921 Lupinus albus HOM05D006817 ORTHO05D008603 9.7e-150 534.3 501 62.3
HPP92_019064 Vanilla planifolia HOM05D006817 ORTHO05D008603 4.8e-149 531.9 496 60.3
HanXRQChr15g0493791 Helianthus annuus HOM05D006817 ORTHO05D008603 8.2e-149 531.2 477 63.1
PSO017G6024 Papaver somniferum HOM05D006817 ORTHO05D008603 1.4e-148 530.4 462 66.7
HanXRQChr08g0222561 Helianthus annuus HOM05D006817 ORTHO05D008603 1.2e-144 517.3 524 57.8
Haze_17339 Corylus avellana HOM05D006817 ORTHO05D008603 3.9e-143 512.3 480 63.8
Zm00001eb406320 Zea mays HOM05D006817 ORTHO05D008603 2.2e-141 506.5 498 58.4
FAN01G1353 Fragaria x ananassa HOM05D006817 ORTHO05D008603 3.1e-140 502.7 457 64.1
Os12g0112300 Oryza sativa ssp. japonica HOM05D006817 ORTHO05D008603 4.1e-140 502.3 500 58.2
AUR62003430 Chenopodium quinoa HOM05D006817 ORTHO05D008603 1.0e-138 497.7 520 57.3
FAN10G2384 Fragaria x ananassa HOM05D006817 ORTHO05D008603 1.7e-138 496.9 453 64.2
SGA_v2.0_scaffold44G16643 Striga asiatica HOM05D006817 ORTHO05D008603 2.7e-136 489.6 494 59.7
AUR62012358 Chenopodium quinoa HOM05D006817 ORTHO05D008603 3.3e-134 482.6 480 60.6
CANSAT56G1261 Cannabis sativa HOM05D006817 ORTHO05D008603 1.3e-133 480.7 469 61.2
Lj8A57G58 Lonicera japonica HOM05D006817 ORTHO05D008603 4.1e-132 475.7 410 67.3
CiPaw.02G198400 Carya illinoinensis HOM05D006817 ORTHO05D008603 2.0e-131 473.4 416 65.4
FvH4_7g25670 Fragaria vesca HOM05D006817 ORTHO05D008603 8.5e-130 468.0 434 63.4
Aa31LG11G6330 Aethionema arabicum HOM05D006817 ORTHO05D008603 1.3e-122 444.1 491 55.8
MD07G1231900 Malus domestica HOM05D006817 ORTHO05D008603 6.1e-120 435.3 366 68.6
CARHR207930 Cardamine hirsuta HOM05D006817 ORTHO05D008603 9.1e-108 394.8 359 62.1
AUR62031486 Chenopodium quinoa HOM05D006817 ORTHO05D008603 2.7e-107 393.3 485 52.4
AT5G05310 Arabidopsis thaliana HOM05D006817 ORTHO05D008603 2.9e-98 363.2 335 62.1
Ca_12776_v3 Cicer arietinum L. HOM05D006817 ORTHO05D008603 2.9e-98 363.2 332 64.2
RcHm_v2.0_Chr1g0371891 Rosa chinensis HOM05D006817 ORTHO05D008603 9.2e-92 341.7 257 73.2
Pp3c22_2490 Physcomitrium patens HOM05D006817 ORTHO05D008603 1.4e-87 327.8 461 45.8
unitig_46.g18743 Utricularia gibba HOM05D006817 ORTHO05D008603 6.6e-82 308.9 324 55.2
VMungo0647G0362 Vigna mungo HOM05D006817 ORTHO05D008603 1.4e-76 291.2 254 65.0
MD05G1328700 Malus domestica HOM05D006817 ORTHO05D008603 2.7e-75 287.0 249 68.3
Carub.0006s0424 Capsella rubella HOM05D006817 ORTHO05D008603 6.6e-74 282.3 285 58.2
Nitab4.5_0000109g0530 Nicotiana tabacum HOM05D006817 ORTHO05D008603 6.4e-61 239.2 219 62.6
MD07G1231800 Malus domestica HOM05D006817 ORTHO05D008603 3.6e-56 223.4 146 76.7
QL10p038395 Quercus lobata HOM05D006817 ORTHO05D008603 1.4e-55 221.5 182 70.3
RcHm_v2.0_Chr1g0371881 Rosa chinensis HOM05D006817 ORTHO05D008603 1.5e-54 218.0 133 82.7
SEGI_05100 Sequoiadendron giganteum HOM05D006817 ORTHO05D008603 1.9e-52 211.1 214 54.2
MSTRG.24128 Avicennia marina HOM05D006817 ORTHO05D008603 7.9e-51 205.7 133 77.4
VMungo0647G0650 Vigna mungo HOM05D006817 ORTHO05D008603 1.5e-46 191.4 168 61.9
Oeu020109.1 Olea europaea HOM05D006817 ORTHO05D008603 1.3e-45 188.3 148 68.2
QL05p063879 Quercus lobata HOM05D006817 ORTHO05D008603 2.7e-43 180.6 161 67.1
SEGI_41528 Sequoiadendron giganteum HOM05D006817 ORTHO05D008603 1.4e-36 158.3 169 55.6
QL03p030054 Quercus lobata HOM05D006817 ORTHO05D008603 8.7e-34 149.1 95 87.4
QL06p040335 Quercus lobata HOM05D006817 ORTHO05D008603 1.6e-32 144.8 106 79.2
QL09p047975 Quercus lobata HOM05D000176 ORTHO05D000106 2.6e-30 137.5 106 76.4
FvH4_7g25690 Fragaria vesca HOM05D006817 ORTHO05D008603 1.7e-29 134.8 90 77.8
Hund15836 Selenicereus undatus HOM05D006817 ORTHO05D008603 2.0e-25 121.3 72 87.5
FAN06G4794 Fragaria x ananassa HOM05D006817 ORTHO05D008603 7.4e-25 119.4 76 80.3
Cre08.g361000 Chlamydomonas reinhardtii HOM05D006817 ORTHO05D008603 1.7e-24 118.2 494 27.3
QL10p065865 Quercus lobata HOM05D006817 ORTHO05D008603 9.1e-23 112.5 87 74.7
QL08p064573 Quercus lobata HOM05D006817 ORTHO05D008603 2.2e-21 107.8 63 82.5
Os11g0112900 Oryza sativa ssp. japonica HOM05D006817 ORTHO05D008603 6.5e-21 106.3 99 58.6
FAN06G1140 Fragaria x ananassa HOM05D006817 ORTHO05D008603 2.4e-15 87.8 57 80.7
MD17G1183400 Malus domestica HOM05D006817 ORTHO05D008603 1.7e-13 81.6 57 73.7
PGSC0003DMG400024308 Solanum tuberosum HOM05D006817 ORTHO05D008603 5.7e-09 66.6 42 76.2
Prupe.2G262300 Prunus persica HOM05D006817 ORTHO05D008603 1.4e-07 62.0 90 48.9


User provided reference genes

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