Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.10G004400 Manihot esculenta HOM05D007521 ORTHO05D009387 1.6e-97 359.4 180 100.0
Potri.019G065400 Populus trichocarpa HOM05D007521 ORTHO05D009387 2.2e-46 189.5 166 61.4
Sabra19G0079100 Salix brachista HOM05D007521 ORTHO05D009387 2.1e-44 183.0 185 58.4
TWI09G0709 Tripterygium wilfordii HOM05D007521 ORTHO05D009387 9.8e-34 147.5 165 52.1
QL08p065346 Quercus lobata HOM05D007521 ORTHO05D009387 3.7e-33 145.6 192 46.9
MD07G1238600 Malus domestica HOM05D007521 ORTHO05D009387 1.2e-31 140.6 189 47.6
Gorai.009G291900 Gossypium raimondii HOM05D007521 ORTHO05D009387 2.0e-31 139.8 184 48.9
Gohir.D05G278400 Gossypium hirsutum HOM05D007521 ORTHO05D009387 2.7e-31 139.4 184 48.9
PGR142G4361 Punica granatum HOM05D007521 ORTHO05D009387 3.5e-31 139.0 156 50.6
Cpa.g.sc65.80 Carica papaya HOM05D007521 ORTHO05D009387 5.9e-31 138.3 193 47.2
Prupe.2G267400 Prunus persica HOM05D007521 ORTHO05D009387 3.8e-30 135.6 158 51.9
Thecc.10G187600 Theobroma cacao HOM05D007521 ORTHO05D009387 3.8e-30 135.6 172 47.1
Duzib114G0131 Durio zibethinus HOM05D007521 ORTHO05D009387 8.6e-30 134.4 188 44.7
Gohir.A05G276700 Gossypium hirsutum HOM05D007521 ORTHO05D009387 1.5e-29 133.7 184 47.3
Ciclev10033598m.g Citrus clementina HOM05D007521 ORTHO05D009387 3.2e-29 132.5 153 51.6
RcHm_v2.0_Chr1g0372781 Rosa chinensis HOM05D007521 ORTHO05D009387 5.5e-29 131.7 195 44.1
CiPaw.08G155800 Carya illinoinensis HOM05D007521 ORTHO05D009387 7.2e-29 131.3 175 47.4
CiPaw.08G156100 Carya illinoinensis HOM05D007521 ORTHO05D009387 7.2e-29 131.3 179 48.6
Cfa001178 Carpinus fangiana HOM05D007521 ORTHO05D009387 2.8e-28 129.4 164 48.2
GSVIVG01032870001 Vitis vinifera HOM05D007521 ORTHO05D009387 2.8e-28 129.4 129 58.1
Lalb_Chr11g0067611 Lupinus albus HOM05D007521 ORTHO05D009387 4.7e-28 128.6 160 46.9
Medtr3g093540 Medicago truncatula HOM05D007521 ORTHO05D009387 1.4e-27 127.1 174 46.0
TPR.G13979 Trifolium pratense HOM05D007521 ORTHO05D009387 1.4e-27 127.1 162 45.1
CANSAT56G2803 Cannabis sativa HOM05D007521 ORTHO05D009387 1.8e-27 126.7 158 48.1
CSS0047724 Camellia sinensis var. sinensis HOM05D007521 ORTHO05D009387 6.8e-27 124.8 161 49.7
FAN06G0083 Fragaria x ananassa HOM05D007521 ORTHO05D009387 8.8e-27 124.4 191 43.5
FAN10G3062 Fragaria x ananassa HOM05D007521 ORTHO05D009387 2.0e-26 123.2 177 44.6
Glyma.04G224700 Glycine max HOM05D007521 ORTHO05D009387 2.6e-26 122.9 158 48.7
FvH4_7g26320 Fragaria vesca HOM05D007521 ORTHO05D009387 3.4e-26 122.5 192 43.8
TAR636G2090 Trochodendron aralioides HOM05D007521 ORTHO05D009387 5.7e-26 121.7 140 52.9
arahy.Tifrunner.gnm1.ann1.RI9J7M Arachis hypogaea HOM05D006307 ORTHO05D008123 1.3e-25 120.6 174 42.0
Lj1g0021108 Lotus japonicus HOM05D007521 ORTHO05D009387 1.3e-25 120.6 167 44.9
PSO384G1785 Papaver somniferum HOM05D007521 ORTHO05D009387 1.7e-25 120.2 141 52.5
Oeu001369.2 Olea europaea HOM05D007521 ORTHO05D009387 2.8e-25 119.4 167 48.5
PSO339G2910 Papaver somniferum HOM05D007521 ORTHO05D009387 2.8e-25 119.4 141 52.5
Eucgr.G03172 Eucalyptus grandis HOM05D007521 ORTHO05D009387 3.7e-25 119.0 164 44.5
Hma1.2p1_0264F.1_g105770 Hydrangea macrophylla HOM05D007521 ORTHO05D009387 3.7e-25 119.0 133 54.1
arahy.Tifrunner.gnm1.ann1.Q2LGCQ Arachis hypogaea HOM05D007521 ORTHO05D009387 4.9e-25 118.6 172 40.7
Ca_16847_v3 Cicer arietinum L. HOM05D006307 ORTHO05D008123 6.3e-25 118.2 154 46.1
Cc02_g04870 Coffea canephora HOM05D007521 ORTHO05D009387 8.3e-25 117.9 128 53.9
HanXRQChr08g0223011 Helianthus annuus HOM05D007521 ORTHO05D009387 2.4e-24 116.3 127 52.0
Nn2g10221 Nelumbo nucifera HOM05D007521 ORTHO05D009387 3.1e-24 115.9 137 53.3
Psat5g070120 Pisum sativum HOM05D007521 ORTHO05D009387 4.1e-24 115.5 163 43.6
MSTRG.8869 Avicennia marina HOM05D007521 ORTHO05D009387 7.0e-24 114.8 131 49.6
VMungo1309G1947 Vigna mungo HOM05D006307 ORTHO05D008123 7.0e-24 114.8 167 44.3
Cc02_g05020 Coffea canephora HOM05D007521 ORTHO05D009387 9.2e-24 114.4 130 51.5
Dinv34514 Davidia involucrata HOM05D007521 ORTHO05D009387 9.2e-24 114.4 137 51.1
Lj8C51T1 Lonicera japonica HOM05D007521 ORTHO05D009387 9.2e-24 114.4 127 55.1
Sopen05g030700 Solanum pennellii HOM05D007521 ORTHO05D009387 9.2e-24 114.4 165 46.7
COL.COLO4_19497 Corchorus olitorius HOM05D007521 ORTHO05D009387 1.2e-23 114.0 166 45.2
Nitab4.5_0011372g0030 Nicotiana tabacum HOM05D007521 ORTHO05D009387 1.2e-23 114.0 167 47.9
THA.LOC104811673 Tarenaya hassleriana HOM05D007521 ORTHO05D009387 2.0e-23 113.2 174 43.1
Lsat_1_v5_gn_8_11100 Lactuca sativa HOM05D007521 ORTHO05D009387 3.5e-23 112.5 167 44.9
Phvul.009G041300 Phaseolus vulgaris HOM05D007521 ORTHO05D009387 3.5e-23 112.5 158 45.6
Solyc05g052170.4 Solanum lycopersicum HOM05D007521 ORTHO05D009387 4.5e-23 112.1 165 46.1
AT4G19985 Arabidopsis thaliana HOM05D007521 ORTHO05D009387 5.9e-23 111.7 172 44.2
Atru.BG.268.p Acer truncatum HOM05D007521 ORTHO05D009387 7.8e-23 111.3 138 51.4
PGSC0003DMG400011658 Solanum tuberosum HOM05D007521 ORTHO05D009387 1.0e-22 110.9 136 50.0
Nitab4.5_0000375g0330 Nicotiana tabacum HOM05D007521 ORTHO05D009387 1.3e-22 110.5 145 49.7
Migut.F00560 Erythranthe guttata HOM05D007521 ORTHO05D009387 3.8e-22 109.0 128 50.0
Peaxi162Scf00167g01120 Petunia axillaris HOM05D007521 ORTHO05D009387 5.0e-22 108.6 167 43.7
AL7G33920 Arabidopsis lyrata HOM05D007521 ORTHO05D009387 6.6e-22 108.2 169 43.2
Carub.0007s2116 Capsella rubella HOM05D007521 ORTHO05D009387 8.6e-22 107.8 179 44.1
C01p13990 Brassica napus HOM05D007521 ORTHO05D009387 1.1e-21 107.5 171 42.7
BolC1t01366H Brassica oleracea HOM05D007521 ORTHO05D009387 1.1e-21 107.5 171 42.7
DCAR_018052 Daucus carota HOM05D006307 ORTHO05D009387 1.9e-21 106.7 139 49.6
vmacro09945 Vaccinium macrocarpon HOM05D006307 ORTHO05D008123 1.9e-21 106.7 134 49.3
Thhalv10026093m.g Eutrema salsugineum HOM05D007521 ORTHO05D009387 5.6e-21 105.1 175 43.4
Actinidia31757 Actinidia chinensis HOM05D007521 ORTHO05D009387 1.2e-20 104.0 129 48.1
Sc11g0006120 Simmondsia chinensis HOM05D007521 ORTHO05D009387 4.7e-20 102.1 143 44.1
ECA233G6052 Erigeron canadensis HOM05D007521 ORTHO05D009387 6.1e-20 101.7 130 50.8
BraA01t01121Z Brassica rapa HOM05D007521 ORTHO05D009387 8.0e-20 101.3 164 42.7
Sp7g18440 Schrenkiella parvula HOM05D007521 ORTHO05D009387 1.0e-19 100.9 178 42.1
BcaC09g51354 Brassica carinata HOM05D007521 ORTHO05D009387 1.4e-19 100.5 161 44.1
A01p11790 Brassica napus HOM05D007521 ORTHO05D009387 1.8e-19 100.1 161 42.9
Hund13426 Selenicereus undatus HOM05D007521 ORTHO05D009387 1.2e-18 97.4 135 44.4
BcaNung01738 Brassica carinata HOM05D007521 ORTHO05D009387 2.0e-18 96.7 181 39.8
Aqoxy4G03316 Aquilegia oxysepala HOM05D007521 ORTHO05D009387 3.4e-18 95.9 126 50.0
unitig_37.g11916 Utricularia gibba HOM05D007521 ORTHO05D009387 7.5e-18 94.7 127 45.7
SGA_v2.0_scaffold60G20871 Striga asiatica HOM05D006307 ORTHO05D008123 1.7e-17 93.6 163 40.5
EL10Ac2g02694 Beta vulgaris HOM05D007521 ORTHO05D009387 2.9e-17 92.8 133 44.4
Aa31LG6G2400 Aethionema arabicum HOM05D007521 ORTHO05D009387 1.1e-16 90.9 184 33.7
CARHR226760 Cardamine hirsuta HOM05D007521 ORTHO05D009387 5.4e-16 88.6 173 37.6
HPP92_019762 Vanilla planifolia HOM05D007521 ORTHO05D009387 1.0e-14 84.3 143 44.1
Zm00001eb284340 Zea mays HOM05D007521 ORTHO05D009387 5.6e-13 78.6 139 41.7
ATR1127G230 Amborella trichopoda HOM05D007521 ORTHO05D009387 7.3e-13 78.2 137 40.1
CDE11G1245 Ceratophyllum demersum HOM05D007521 ORTHO05D009387 1.1e-11 74.3 104 47.1
Hma1.2p1_0264F.1_g105790 Hydrangea macrophylla HOM05D007521 ORTHO05D009387 1.8e-11 73.6 109 45.9
Mapoly0070s0078 Marchantia polymorpha HOM05D007521 ORTHO05D009387 1.3e-09 67.4 169 32.0
Actinidia01020 Actinidia chinensis HOM05D007521 ORTHO05D009387 1.1e-08 64.3 88 46.6
AagrBONN_evm.TU.Sc2ySwM_228.2023 Anthoceros agrestis HOM05D007521 ORTHO05D009387 9.2e-08 61.2 141 34.0
SEGI_30344 Sequoiadendron giganteum HOM05D007521 ORTHO05D009387 3.5e-07 59.3 155 32.9
CDE04G1691 Ceratophyllum demersum HOM05D000172 ORTHO05D000273 1.0e-06 57.8 91 44.0


User provided reference genes

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