Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.09G183300 Manihot esculenta HOM05D007028 ORTHO05D003658 1.2e-157 559.7 266 100.0
Manes.08G105400 Manihot esculenta HOM05D007028 ORTHO05D003658 1.7e-87 326.6 264 64.0
Ciclev10013422m.g Citrus clementina HOM05D007028 ORTHO05D003658 3.0e-31 139.8 275 35.6
TAR633G1987 Trochodendron aralioides HOM05D007028 ORTHO05D003658 1.1e-28 131.3 112 61.6
Lj2C51T14 Lonicera japonica HOM05D007028 ORTHO05D003658 2.4e-28 130.2 326 31.6
Lsat_1_v5_gn_2_16281 Lactuca sativa HOM05D007028 ORTHO05D003658 2.0e-27 127.1 275 34.2
VMungo1383G2132 Vigna mungo HOM05D007028 ORTHO05D003658 7.7e-27 125.2 84 66.7
MD05G1175300 Malus domestica HOM05D007028 ORTHO05D003658 1.0e-26 124.8 277 32.9
Dinv19203 Davidia involucrata HOM05D007028 ORTHO05D003658 2.2e-26 123.6 86 66.3
Hma1.2p1_0226F.1_g095710 Hydrangea macrophylla HOM05D007028 ORTHO05D003658 2.2e-26 123.6 123 53.7
ECA238G1648 Erigeron canadensis HOM05D007028 ORTHO05D003658 2.5e-25 120.2 129 47.3
Glyma.19G251200 Glycine max HOM05D007028 ORTHO05D003658 2.5e-25 120.2 172 41.3
FAN27G2710 Fragaria x ananassa HOM05D007028 ORTHO05D003658 4.2e-25 119.4 274 33.6
Actinidia23722 Actinidia chinensis HOM05D007814 ORTHO05D009902 5.5e-25 119.0 122 53.3
arahy.Tifrunner.gnm1.ann1.RXM0S4 Arachis hypogaea HOM05D007028 ORTHO05D003658 5.5e-25 119.0 76 63.2
arahy.Tifrunner.gnm1.ann1.W3CHFV Arachis hypogaea HOM05D007028 ORTHO05D003658 5.5e-25 119.0 76 63.2
Oeu043137.1 Olea europaea HOM05D007028 ORTHO05D003658 5.5e-25 119.0 88 58.0
Eucgr.H01353 Eucalyptus grandis HOM05D007028 ORTHO05D003658 7.2e-25 118.6 74 73.0
TPR.G23292 Trifolium pratense HOM05D007028 ORTHO05D003658 7.2e-25 118.6 256 32.4
Cpa.g.sc8.155 Carica papaya HOM05D007028 ORTHO05D003658 9.4e-25 118.2 80 66.2
FvH4_2g19050 Fragaria vesca HOM05D007028 ORTHO05D003658 9.4e-25 118.2 273 34.1
Actinidia09481 Actinidia chinensis HOM05D007028 ORTHO05D003658 1.2e-24 117.9 101 61.4
Glyma.03G253700 Glycine max HOM05D007028 ORTHO05D003658 1.2e-24 117.9 77 67.5
Sopen09g023970 Solanum pennellii HOM05D007028 ORTHO05D003658 1.2e-24 117.9 89 64.0
Peaxi162Scf00107g00204 Petunia axillaris HOM05D007028 ORTHO05D003658 2.1e-24 117.1 89 62.9
Solyc09g061240.1 Solanum lycopersicum HOM05D007028 ORTHO05D003658 2.1e-24 117.1 89 64.0
PGSC0003DMG400046108 Solanum tuberosum HOM05D007028 ORTHO05D003658 2.1e-24 117.1 89 64.0
ATR0215G032 Amborella trichopoda HOM05D007028 ORTHO05D003658 2.7e-24 116.7 76 68.4
FAN24G0765 Fragaria x ananassa HOM05D007028 ORTHO05D003658 2.7e-24 116.7 273 33.7
Cc01_g17020 Coffea canephora HOM05D007028 ORTHO05D003658 1.0e-23 114.8 121 49.6
Psat5g168520 Pisum sativum HOM05D007028 ORTHO05D003658 1.0e-23 114.8 84 66.7
Lj1g0008030 Lotus japonicus HOM05D007028 ORTHO05D003658 1.4e-23 114.4 76 65.8
Nitab4.5_0000045g0190 Nicotiana tabacum HOM05D007028 ORTHO05D003658 1.8e-23 114.0 106 58.5
ATR0215G020 Amborella trichopoda HOM05D007028 ORTHO05D003658 2.3e-23 113.6 72 69.4
Gohir.A11G138300 Gossypium hirsutum HOM05D007028 ORTHO05D003658 2.3e-23 113.6 93 63.4
Gorai.007G154400 Gossypium raimondii HOM05D007028 ORTHO05D003658 2.3e-23 113.6 93 63.4
Cfa002571 Carpinus fangiana HOM05D007028 ORTHO05D003658 3.0e-23 113.2 262 34.4
FAN15G3354 Fragaria x ananassa HOM05D007028 ORTHO05D003658 3.9e-23 112.8 273 31.9
Nitab4.5_0003312g0020 Nicotiana tabacum HOM05D007028 ORTHO05D003658 5.1e-23 112.5 95 61.1
Gohir.D11G144200 Gossypium hirsutum HOM05D007028 ORTHO05D003658 8.8e-23 111.7 258 33.3
Ciclev10023784m.g Citrus clementina HOM05D007028 ORTHO05D003658 1.1e-22 111.3 86 60.5
Glyma.03G080500 Glycine max HOM05D007028 ORTHO05D003658 1.1e-22 111.3 270 33.7
Medtr7g057900 Medicago truncatula HOM05D007028 ORTHO05D003658 1.5e-22 110.9 84 60.7
Potri.002G242400 Populus trichocarpa HOM05D007028 ORTHO05D003658 1.5e-22 110.9 89 56.2
MD10G1164400 Malus domestica HOM05D007028 ORTHO05D003658 3.3e-22 109.8 266 31.2
Thecc.01G225600 Theobroma cacao HOM05D007028 ORTHO05D003658 4.4e-22 109.4 265 34.7
Lsat_1_v5_gn_8_3220 Lactuca sativa HOM05D007028 ORTHO05D003658 5.7e-22 109.0 70 68.6
Lsat_1_v5_gn_9_12301 Lactuca sativa HOM05D007028 ORTHO05D003658 5.7e-22 109.0 122 48.4
COL.COLO4_04560 Corchorus olitorius HOM05D007028 ORTHO05D003658 1.3e-21 107.8 113 53.1
Actinidia37594 Actinidia chinensis HOM05D007028 ORTHO05D003658 1.7e-21 107.5 70 70.0
Manes.12G044800 Manihot esculenta HOM05D007028 ORTHO05D003658 1.7e-21 107.5 102 49.0
Prupe.8G203000 Prunus persica HOM05D007028 ORTHO05D003658 2.8e-21 106.7 267 31.5
DCAR_005532 Daucus carota HOM05D007028 ORTHO05D003658 8.2e-21 105.1 71 64.8
Migut.N00615 Erythranthe guttata HOM05D007028 ORTHO05D003658 1.4e-20 104.4 82 56.1
QL09p054524 Quercus lobata HOM05D007028 ORTHO05D003658 1.4e-20 104.4 83 59.0
ClCG09G009040 Citrullus lanatus HOM05D007028 ORTHO05D003658 1.8e-20 104.0 172 36.6
CsaV3_7G025940 Cucumis sativus L. HOM05D007028 ORTHO05D003658 2.4e-20 103.6 83 57.8
Sed0022017 Sechium edule HOM05D007028 ORTHO05D003658 5.3e-20 102.4 73 60.3
MELO3C021015.2 Cucumis melo HOM05D007028 ORTHO05D003658 3.4e-19 99.8 131 43.5
Haze_24802 Corylus avellana HOM05D007028 ORTHO05D003658 2.1e-16 90.5 63 65.1
Actinidia25445 Actinidia chinensis HOM05D007028 ORTHO05D010012 6.1e-16 89.0 67 52.2
DCAR_007440 Daucus carota HOM05D007028 ORTHO05D003658 6.1e-16 89.0 82 47.6
ATR0749G015 Amborella trichopoda HOM05D007028 ORTHO05D003658 1.8e-15 87.4 87 48.3
Cc04_g04860 Coffea canephora HOM05D007028 ORTHO05D003658 3.0e-15 86.7 67 53.7
HanXRQChr08g0235831 Helianthus annuus HOM05D007028 ORTHO05D003658 3.9e-15 86.3 71 45.1
Oeu010371.1 Olea europaea HOM05D007028 ORTHO05D003658 3.9e-15 86.3 75 46.7
arahy.Tifrunner.gnm1.ann1.SE9SAL Arachis hypogaea HOM05D007028 ORTHO05D003658 5.2e-15 85.9 95 41.1
Aqoxy7G01883 Aquilegia oxysepala HOM05D007028 ORTHO05D003658 8.8e-15 85.1 68 51.5
Cfa001903 Carpinus fangiana HOM05D007028 ORTHO05D003658 1.1e-14 84.7 68 51.5
MBI04_g44678_MAGBIO Magnolia biondii HOM05D007028 ORTHO05D003658 1.1e-14 84.7 80 47.5
Thecc.06G037900 Theobroma cacao HOM05D007028 ORTHO05D003658 1.1e-14 84.7 84 45.2
Dinv23308 Davidia involucrata HOM05D007028 ORTHO05D010012 1.5e-14 84.3 84 45.2
Manes.11G063900 Manihot esculenta HOM05D007028 ORTHO05D003658 1.5e-14 84.3 183 31.7
Potri.003G179600 Populus trichocarpa HOM05D007028 ORTHO05D003658 1.5e-14 84.3 80 48.8
Ciclev10027378m.g Citrus clementina HOM05D007028 ORTHO05D003658 2.0e-14 84.0 72 50.0
Medtr2g104800 Medicago truncatula HOM05D007028 ORTHO05D003658 2.0e-14 84.0 109 40.4
Prupe.3G095700 Prunus persica HOM05D007028 ORTHO05D003658 2.0e-14 84.0 68 48.5
Nitab4.5_0006291g0010 Nicotiana tabacum HOM05D007028 ORTHO05D003658 2.6e-14 83.6 108 38.9
TPR.G19149 Trifolium pratense HOM05D007028 ORTHO05D003658 2.6e-14 83.6 68 54.4
MD17G1220000 Malus domestica HOM05D007028 ORTHO05D003658 3.3e-14 83.2 68 48.5
PGSC0003DMG402014197 Solanum tuberosum HOM05D007028 ORTHO05D003658 4.4e-14 82.8 93 39.8
Peaxi162Scf00332g00034 Petunia axillaris HOM05D007028 ORTHO05D003658 9.7e-14 81.6 108 38.0
Lsat_1_v5_gn_8_100120 Lactuca sativa HOM05D007028 ORTHO05D003658 1.3e-13 81.3 67 43.3
QL05p034297 Quercus lobata HOM05D007028 ORTHO05D003658 1.3e-13 81.3 68 48.5
Solyc03g117170.1 Solanum lycopersicum HOM05D007028 ORTHO05D003658 1.3e-13 81.3 93 39.8
Sopen03g036070 Solanum pennellii HOM05D007028 ORTHO05D003658 1.7e-13 80.9 67 47.8
FvH4_6g28900 Fragaria vesca HOM05D007028 ORTHO05D003658 2.8e-13 80.1 68 48.5
FAN02G1822 Fragaria x ananassa HOM05D007028 ORTHO05D003658 2.8e-13 80.1 68 48.5
FAN05G3224 Fragaria x ananassa HOM05D007028 ORTHO05D003658 2.8e-13 80.1 68 48.5
FAN09G0870 Fragaria x ananassa HOM05D007028 ORTHO05D003658 2.8e-13 80.1 68 48.5
FAN14G4516 Fragaria x ananassa HOM05D007028 ORTHO05D003658 2.8e-13 80.1 68 48.5
Ca_01026_v3 Cicer arietinum L. HOM05D007028 ORTHO05D003658 3.7e-13 79.7 68 48.5
Lj3g0003871 Lotus japonicus HOM05D007028 ORTHO05D003658 6.3e-13 79.0 94 37.2
Cpa.g.sc10.116 Carica papaya HOM05D007028 ORTHO05D003658 1.8e-12 77.4 75 46.7
COL.COLO4_26654 Corchorus olitorius HOM05D007028 ORTHO05D003658 1.8e-12 77.4 79 45.6
Nitab4.5_0001454g0010 Nicotiana tabacum HOM05D007028 ORTHO05D003658 3.1e-12 76.6 92 39.1
Actinidia18232 Actinidia chinensis HOM05D007028 ORTHO05D003658 4.1e-12 76.3 63 46.0
VMungo1080G1428 Vigna mungo HOM05D007028 ORTHO05D003658 7.0e-12 75.5 68 48.5
MBI10_g11201_MAGBIO Magnolia biondii HOM05D002002 ORTHO05D003658 2.0e-11 73.9 83 42.2
Manes.12G063951 Manihot esculenta HOM05D002002 ORTHO05D003658 2.0e-11 73.9 80 42.5
Gohir.A05G120800 Gossypium hirsutum HOM05D007028 ORTHO05D003658 2.6e-11 73.6 80 45.0
Glyma.15G004600 Glycine max HOM05D007028 ORTHO05D003658 3.5e-11 73.2 68 48.5
Cpa.g.sc136.48 Carica papaya HOM05D002002 ORTHO05D003658 4.5e-11 72.8 74 47.3
Gorai.001G223200 Gossypium raimondii HOM05D002002 ORTHO05D003658 5.9e-11 72.4 73 46.6
Phvul.005G180900 Phaseolus vulgaris HOM05D007028 ORTHO05D003658 5.9e-11 72.4 67 47.8
Gohir.A07G193000 Gossypium hirsutum HOM05D002002 ORTHO05D003658 7.7e-11 72.0 73 46.6
Gohir.D07G199350 Gossypium hirsutum HOM05D002002 ORTHO05D003658 7.7e-11 72.0 73 46.6
Migut.D01094 Erythranthe guttata HOM05D007028 ORTHO05D003658 1.0e-10 71.6 83 38.6
Potri.002G217100 Populus trichocarpa HOM05D002002 ORTHO05D003658 1.0e-10 71.6 152 28.3
Os06g0568400 Oryza sativa ssp. japonica HOM05D007028 ORTHO05D003658 1.3e-10 71.2 79 45.6
DCAR_019665 Daucus carota HOM05D002002 ORTHO05D003658 1.7e-10 70.9 71 47.9
Gorai.009G125300 Gossypium raimondii HOM05D007028 ORTHO05D003658 1.7e-10 70.9 78 44.9
Oeu034272.1 Olea europaea HOM05D002002 ORTHO05D003658 1.7e-10 70.9 73 46.6
Oeu034273.1 Olea europaea HOM05D002002 ORTHO05D003658 1.7e-10 70.9 73 46.6
Glyma.13G369200 Glycine max HOM05D007028 ORTHO05D003658 2.2e-10 70.5 95 36.8
Gohir.D05G121800 Gossypium hirsutum HOM05D007028 ORTHO05D003658 2.2e-10 70.5 80 43.8
Zm00001eb385060 Zea mays HOM05D007028 ORTHO05D003658 2.9e-10 70.1 123 36.6
DCAR_021086 Daucus carota HOM05D002002 ORTHO05D003658 5.0e-10 69.3 127 31.5
Actinidia35198 Actinidia chinensis HOM05D002148 ORTHO05D002547 6.5e-10 68.9 123 35.0
Cc05_g02030 Coffea canephora HOM05D002002 ORTHO05D003658 8.5e-10 68.6 110 33.6
Haze_12592 Corylus avellana HOM05D002002 ORTHO05D003658 8.5e-10 68.6 93 39.8
MSTRG.14910 Avicennia marina HOM05D002002 ORTHO05D003658 1.1e-09 68.2 111 34.2
Cfa014206 Carpinus fangiana HOM05D002002 ORTHO05D003658 1.1e-09 68.2 80 38.8
Aqoxy6G00290 Aquilegia oxysepala HOM05D002002 ORTHO05D003658 1.5e-09 67.8 91 37.4
MD17G1118900 Malus domestica HOM05D002002 ORTHO05D003658 1.5e-09 67.8 94 37.2
CiPaw.03G283400 Carya illinoinensis HOM05D002002 ORTHO05D003658 1.9e-09 67.4 100 37.0
HanXRQChr10g0306811 Helianthus annuus HOM05D002002 ORTHO05D003658 2.5e-09 67.0 72 38.9
TAR627G0575 Trochodendron aralioides HOM05D003572 ORTHO05D004118 2.5e-09 67.0 73 42.5
ATR0824G058 Amborella trichopoda HOM05D002002 ORTHO05D003658 4.2e-09 66.2 72 45.8
Migut.M00058 Erythranthe guttata HOM05D002002 ORTHO05D003658 4.2e-09 66.2 76 40.8
MBI15_g44612_MAGBIO Magnolia biondii HOM05D002002 ORTHO05D003658 4.2e-09 66.2 73 41.1
Peaxi162Scf00047g02117 Petunia axillaris HOM05D002002 ORTHO05D003658 4.2e-09 66.2 128 30.5
Migut.I00721 Erythranthe guttata HOM05D007028 ORTHO05D003658 5.5e-09 65.9 77 37.7
FAN09G2779 Fragaria x ananassa HOM05D002002 ORTHO05D003658 7.2e-09 65.5 97 35.1
TWI36G0682 Tripterygium wilfordii HOM05D002002 ORTHO05D003658 7.2e-09 65.5 91 33.0
FvH4_6g40440 Fragaria vesca HOM05D002002 ORTHO05D003658 9.4e-09 65.1 97 35.1
Hma1.2p1_0629F.1_g192180 Hydrangea macrophylla HOM05D002002 ORTHO05D003658 9.4e-09 65.1 73 45.2
Nitab4.5_0013754g0020 Nicotiana tabacum HOM05D002002 ORTHO05D003658 9.4e-09 65.1 127 30.7
ECA234G3591 Erigeron canadensis HOM05D002002 ORTHO05D003658 1.2e-08 64.7 91 37.4
Lsat_1_v5_gn_5_122320 Lactuca sativa HOM05D002002 ORTHO05D003658 1.2e-08 64.7 74 36.5
RcHm_v2.0_Chr2g0155671 Rosa chinensis HOM05D002002 ORTHO05D003658 1.2e-08 64.7 74 40.5
TAR626G0223 Trochodendron aralioides HOM05D002002 ORTHO05D003658 1.2e-08 64.7 85 34.1
FAN05G3832 Fragaria x ananassa HOM05D002002 ORTHO05D003658 2.1e-08 63.9 74 40.5
MD09G1129900 Malus domestica HOM05D002002 ORTHO05D003658 2.1e-08 63.9 79 36.7
Aqoxy5G03765 Aquilegia oxysepala HOM05D002002 ORTHO05D003658 2.7e-08 63.5 95 34.7
COL.COLO4_24276 Corchorus olitorius HOM05D002002 ORTHO05D008711 2.7e-08 63.5 72 41.7
FAN02G0217 Fragaria x ananassa HOM05D002002 ORTHO05D003658 2.7e-08 63.5 74 40.5
Thecc.01G199000 Theobroma cacao HOM05D002002 ORTHO05D003658 2.7e-08 63.5 79 39.2
Nitab4.5_0001229g0060 Nicotiana tabacum HOM05D002002 ORTHO05D003658 4.7e-08 62.8 125 29.6
Prupe.3G195300 Prunus persica HOM05D002002 ORTHO05D003658 6.1e-08 62.4 95 35.8
COL.COLO4_19649 Corchorus olitorius HOM05D002002 ORTHO05D003658 8.0e-08 62.0 71 42.3
Cc11_g15730 Coffea canephora HOM05D002002 ORTHO05D008711 1.0e-07 61.6 72 40.3
FAN14G2025 Fragaria x ananassa HOM05D002002 ORTHO05D003658 1.0e-07 61.6 81 40.7
DCAR_031154 Daucus carota HOM05D002002 ORTHO05D003658 1.8e-07 60.8 106 31.1
FAN02G4604 Fragaria x ananassa HOM05D002002 ORTHO05D003658 1.8e-07 60.8 82 36.6
AagrBONN_evm.TU.Sc2ySwM_362.219 Anthoceros agrestis HOM05D005780 ORTHO05D007289 2.3e-07 60.5 71 42.3
FAN14G1296 Fragaria x ananassa HOM05D002002 ORTHO05D003658 3.0e-07 60.1 97 34.0
Eucgr.B03286 Eucalyptus grandis HOM05D002002 ORTHO05D003658 4.0e-07 59.7 116 28.4
FvH4_6g24840 Fragaria vesca HOM05D002002 ORTHO05D003658 4.0e-07 59.7 81 39.5
Manes.12G023250 Manihot esculenta HOM05D002002 ORTHO05D003658 4.0e-07 59.7 82 37.8
Lj3C1058T7 Lonicera japonica HOM05D002002 ORTHO05D008711 5.2e-07 59.3 72 38.9
Prupe.1G244300 Prunus persica HOM05D002002 ORTHO05D003658 5.2e-07 59.3 81 34.6
PGSC0003DMG400028833 Solanum tuberosum HOM05D002002 ORTHO05D003658 6.7e-07 58.9 101 29.7
Gohir.A03G135305 Gossypium hirsutum HOM05D002002 ORTHO05D003658 8.8e-07 58.5 73 37.0
Ciclev10033784m.g Citrus clementina HOM05D002002 ORTHO05D003658 1.2e-06 58.2 72 37.5
Gohir.D02G158850 Gossypium hirsutum HOM05D002002 ORTHO05D003658 1.2e-06 58.2 73 37.0
MD13G1101500 Malus domestica HOM05D002002 ORTHO05D003658 1.2e-06 58.2 73 34.2
Ciclev10017528m.g Citrus clementina HOM05D002002 ORTHO05D003658 1.5e-06 57.8 71 43.7
TAR374G1279 Trochodendron aralioides HOM05D002002 ORTHO05D003658 1.5e-06 57.8 68 42.6
CSS0040170 Camellia sinensis var. sinensis HOM05D002002 ORTHO05D003658 2.0e-06 57.4 72 36.1
CANSAT01G1710 Cannabis sativa HOM05D002002 ORTHO05D003658 2.0e-06 57.4 72 36.1
Haze_12247 Corylus avellana HOM05D002002 ORTHO05D008711 2.0e-06 57.4 84 34.5
Oeu056712.1 Olea europaea HOM05D002002 ORTHO05D013431 2.0e-06 57.4 89 33.7
Sabra01G0033500 Salix brachista HOM05D007028 ORTHO05D003658 2.0e-06 57.4 50 48.0
Sabra02G0184700 Salix brachista HOM05D007028 ORTHO05D003658 2.6e-06 57.0 40 62.5
FAN05G0600 Fragaria x ananassa HOM05D002002 ORTHO05D003658 3.3e-06 56.6 82 34.1
FAN05G4965 Fragaria x ananassa HOM05D002002 ORTHO05D003658 3.3e-06 56.6 82 34.1
RcHm_v2.0_Chr4g0432961 Rosa chinensis HOM05D002002 ORTHO05D008711 3.3e-06 56.6 74 37.8
Hma1.2p1_0160F.1_g071270 Hydrangea macrophylla HOM05D002002 ORTHO05D003658 5.7e-06 55.8 73 37.0
ATR0564G119 Amborella trichopoda HOM05D001767 ORTHO05D001714 7.5e-06 55.5 69 33.3
Potri.010G046225 Populus trichocarpa HOM05D002002 ORTHO05D003658 7.5e-06 55.5 72 36.1
PGR102G0007 Punica granatum HOM05D002002 ORTHO05D003658 7.5e-06 55.5 75 37.3
QL04p067058 Quercus lobata HOM05D002002 ORTHO05D003658 7.5e-06 55.5 54 48.1


User provided reference genes

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