Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.09G181400 Manihot esculenta HOM05D002165 ORTHO05D001531 1.0e-44 183.0 89 100.0
Manes.15G075800 Manihot esculenta HOM05D002165 ORTHO05D001531 2.3e-20 102.1 84 60.7
Manes.08G107400 Manihot esculenta HOM05D002165 ORTHO05D001531 4.1e-17 91.3 84 59.5
FAN02G1676 Fragaria x ananassa HOM05D002165 ORTHO05D001531 3.1e-09 65.1 81 48.1
FAN09G0584 Fragaria x ananassa HOM05D002165 ORTHO05D001531 3.1e-09 65.1 81 48.1
Prupe.6G304200 Prunus persica HOM05D002165 ORTHO05D001531 5.4e-09 64.3 81 45.7
FAN05G4164 Fragaria x ananassa HOM05D002165 ORTHO05D001531 7.0e-09 63.9 81 46.9
Prupe.6G304300 Prunus persica HOM05D002165 ORTHO05D001531 1.2e-08 63.2 81 43.2
FvH4_6g08530 Fragaria vesca HOM05D002165 ORTHO05D001531 4.5e-08 61.2 81 45.7
FAN14G5435 Fragaria x ananassa HOM05D002165 ORTHO05D001531 4.5e-08 61.2 81 45.7
BraA02t08873Z Brassica rapa HOM05D002165 ORTHO05D001531 5.9e-08 60.8 81 48.1
BcaNung03681 Brassica carinata HOM05D002165 ORTHO05D001531 7.8e-08 60.5 81 46.9
C07p41550 Brassica napus HOM05D002165 ORTHO05D001531 7.8e-08 60.5 81 46.9
BolC7t44687H Brassica oleracea HOM05D002165 ORTHO05D001531 7.8e-08 60.5 81 46.9
BcaC03g17834 Brassica carinata HOM05D002165 ORTHO05D001531 1.0e-07 60.1 81 48.1
BcaNung03907 Brassica carinata HOM05D002165 ORTHO05D001531 1.0e-07 60.1 81 46.9
BcaNung06223 Brassica carinata HOM05D002165 ORTHO05D001531 1.0e-07 60.1 81 48.1
A02p39040 Brassica napus HOM05D002165 ORTHO05D001531 1.0e-07 60.1 81 48.1
A06p36950 Brassica napus HOM05D002165 ORTHO05D001531 1.0e-07 60.1 81 46.9
C02p58650 Brassica napus HOM05D002165 ORTHO05D001531 1.0e-07 60.1 81 48.1
BolC2t11925H Brassica oleracea HOM05D002165 ORTHO05D001531 1.0e-07 60.1 81 48.1
BraA06t26620Z Brassica rapa HOM05D002165 ORTHO05D001531 1.0e-07 60.1 81 46.9
BcaB04g19717 Brassica carinata HOM05D002165 ORTHO05D001531 1.3e-07 59.7 78 47.4
Thhalv10005460m.g Eutrema salsugineum HOM05D002165 ORTHO05D001531 1.3e-07 59.7 82 48.8
Ciclev10013220m.g Citrus clementina HOM05D002165 ORTHO05D001531 2.3e-07 58.9 78 46.2
TWI12G1307 Tripterygium wilfordii HOM05D002165 ORTHO05D001531 2.3e-07 58.9 93 38.7
BcaB07g29941 Brassica carinata HOM05D002165 ORTHO05D001531 5.0e-07 57.8 81 45.7
Ciclev10013222m.g Citrus clementina HOM05D002165 ORTHO05D001531 6.6e-07 57.4 78 43.6
Ciclev10013684m.g Citrus clementina HOM05D002165 ORTHO05D001531 1.5e-06 56.2 78 42.3
DCAR_002292 Daucus carota HOM05D002165 ORTHO05D001531 3.3e-06 55.1 72 48.6
TAR362G0276 Trochodendron aralioides HOM05D002165 ORTHO05D001531 3.3e-06 55.1 80 43.8
DCAR_001887 Daucus carota HOM05D002165 ORTHO05D001531 5.6e-06 54.3 72 48.6
BcaC04g23632 Brassica carinata HOM05D002165 ORTHO05D001531 7.3e-06 53.9 78 43.6
A09p05720 Brassica napus HOM05D002165 ORTHO05D001531 7.3e-06 53.9 78 43.6
C09p06310 Brassica napus HOM05D002165 ORTHO05D001531 7.3e-06 53.9 78 43.6
BolC9t53551H Brassica oleracea HOM05D002165 ORTHO05D001531 7.3e-06 53.9 78 43.6
BraA09t36213Z Brassica rapa HOM05D002165 ORTHO05D001531 7.3e-06 53.9 78 43.6
Ciclev10013801m.g Citrus clementina HOM05D002165 ORTHO05D001531 7.3e-06 53.9 78 44.9
COL.COLO4_05484 Corchorus olitorius HOM05D002165 ORTHO05D001531 9.5e-06 53.5 82 47.6
RcHm_v2.0_Chr3g0458591 Rosa chinensis HOM05D002165 ORTHO05D001531 9.5e-06 53.5 83 41.0


User provided reference genes

Program Settings