Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.09G171725 Manihot esculenta HOM05D020154 ORTHO05D003404 2.9e-91 338.6 173 100.0
Manes.09G172850 Manihot esculenta HOM05D020154 ORTHO05D003404 3.7e-91 338.2 173 99.4
Manes.09G173066 Manihot esculenta HOM05D020154 ORTHO05D003404 3.7e-91 338.2 173 99.4
Manes.09G173282 Manihot esculenta HOM05D020154 ORTHO05D003404 3.7e-91 338.2 173 99.4
Manes.09G173500 Manihot esculenta HOM05D003556 ORTHO05D003404 1.3e-38 163.7 176 50.6
Manes.08G115800 Manihot esculenta HOM05D001445 ORTHO05D003404 3.9e-32 142.1 173 45.1
Manes.08G115700 Manihot esculenta HOM05D001445 ORTHO05D003404 2.6e-31 139.4 173 44.5
MBI19_g44106_MAGBIO Magnolia biondii HOM05D003556 ORTHO05D003404 3.2e-18 95.9 161 33.5
Nn3g21538 Nelumbo nucifera HOM05D003556 ORTHO05D003404 1.2e-17 94.0 138 34.8
TAR216G0004 Trochodendron aralioides HOM05D003556 ORTHO05D003404 2.1e-17 93.2 172 30.8
Ciclev10002648m.g Citrus clementina HOM05D003556 ORTHO05D003404 8.0e-17 91.3 145 34.5
TWI56G0141 Tripterygium wilfordii HOM05D001445 ORTHO05D003404 6.8e-16 88.2 146 32.2
TAR362G0992 Trochodendron aralioides HOM05D003556 ORTHO05D003404 8.8e-16 87.8 166 31.9
TWI12G1373 Tripterygium wilfordii HOM05D003556 ORTHO05D003404 1.2e-15 87.4 148 29.1
TWI60G0816 Tripterygium wilfordii HOM05D003556 ORTHO05D003404 2.6e-15 86.3 148 29.1
MELO3C015291.2 Cucumis melo HOM05D003556 ORTHO05D003404 4.4e-15 85.5 155 30.3
Cpa.g.sc48.109 Carica papaya HOM05D003556 ORTHO05D003404 1.7e-14 83.6 168 32.7
ClCG03G017200 Citrullus lanatus HOM05D003556 ORTHO05D003404 1.8e-13 80.1 140 30.0
CsaV3_1G038650 Cucumis sativus L. HOM05D003556 ORTHO05D003404 1.8e-13 80.1 155 29.0
Dinv40359 Davidia involucrata HOM05D003556 ORTHO05D003404 3.1e-13 79.3 170 32.4
Dinv40360 Davidia involucrata HOM05D003556 ORTHO05D003404 5.4e-13 78.6 133 33.1
Thecc.09G068900 Theobroma cacao HOM05D001445 ORTHO05D003404 2.0e-12 76.6 140 33.6
Manes.03G082200 Manihot esculenta HOM05D020154 ORTHO05D003404 2.7e-12 76.3 161 30.4
Manes.03G083162 Manihot esculenta HOM05D020154 ORTHO05D003404 2.7e-12 76.3 167 30.5
Actinidia19773 Actinidia chinensis HOM05D003556 ORTHO05D003404 4.5e-12 75.5 146 30.8
Aqoxy2G02898 Aquilegia oxysepala HOM05D003556 ORTHO05D003404 1.0e-11 74.3 169 28.4
CSS0025537 Camellia sinensis var. sinensis HOM05D003556 ORTHO05D003404 1.7e-11 73.6 141 33.3
CSS0050483 Camellia sinensis var. sinensis HOM05D003556 ORTHO05D003404 1.7e-11 73.6 141 33.3
Sed0028173 Sechium edule HOM05D003556 ORTHO05D003404 1.7e-11 73.6 134 28.4
Potri.005G023050 Populus trichocarpa HOM05D014310 ORTHO05D030505 2.2e-11 73.2 147 33.3
Rhsim05G0137100 Rhododendron simsii HOM05D003556 ORTHO05D003404 2.9e-11 72.8 171 28.1
Potri.005G023100 Populus trichocarpa HOM05D014310 ORTHO05D030505 8.5e-11 71.2 147 32.0
Potri.005G023201 Populus trichocarpa HOM05D014310 ORTHO05D030505 8.5e-11 71.2 147 32.0
Cfa006653 Carpinus fangiana HOM05D003556 ORTHO05D003404 2.5e-10 69.7 157 29.9
CANSAT56G1763 Cannabis sativa HOM05D001445 ORTHO05D001261 3.2e-10 69.3 141 27.7
Eucgr.D01179 Eucalyptus grandis HOM05D001445 ORTHO05D001261 4.2e-10 68.9 156 28.2
Eucgr.D01180 Eucalyptus grandis HOM05D001445 ORTHO05D001261 4.2e-10 68.9 156 28.2
Eucgr.D01181 Eucalyptus grandis HOM05D001445 ORTHO05D001261 4.2e-10 68.9 156 28.2
CiPaw.07G023500 Carya illinoinensis HOM05D003556 ORTHO05D003404 5.5e-10 68.6 163 30.7
AUR62025555 Chenopodium quinoa HOM05D003556 ORTHO05D003404 5.5e-10 68.6 134 32.8
Eucgr.L02459 Eucalyptus grandis HOM05D001445 ORTHO05D001261 5.5e-10 68.6 156 28.2
CDE07G1929 Ceratophyllum demersum HOM05D001445 ORTHO05D001261 7.2e-10 68.2 139 30.9
Sed0024461 Sechium edule HOM05D003556 ORTHO05D003404 1.2e-09 67.4 135 27.4
CANSAT56G2517 Cannabis sativa HOM05D001445 ORTHO05D003404 1.6e-09 67.0 141 27.0
AUR62008689 Chenopodium quinoa HOM05D003556 ORTHO05D003404 1.6e-09 67.0 134 32.1
CDE06G2513 Ceratophyllum demersum HOM05D001445 ORTHO05D001261 4.7e-09 65.5 142 28.2
Thecc.01G303600 Theobroma cacao HOM05D003556 ORTHO05D003404 1.0e-08 64.3 171 29.2
TAR629G2132 Trochodendron aralioides HOM05D001445 ORTHO05D001261 1.4e-08 63.9 172 26.2
Duzib084G0977 Durio zibethinus HOM05D001445 ORTHO05D001261 1.8e-08 63.5 172 26.7
Lj4g0026234 Lotus japonicus HOM05D001445 ORTHO05D001261 1.8e-08 63.5 129 32.6
CANSAT25G0193 Cannabis sativa HOM05D003556 ORTHO05D003404 2.3e-08 63.2 140 30.0
Medtr4g099010 Medicago truncatula HOM05D001445 ORTHO05D001261 2.3e-08 63.2 142 32.4
PGR004G2339 Punica granatum HOM05D001578 ORTHO05D001207 3.0e-08 62.8 158 27.2
COL.COLO4_17127 Corchorus olitorius HOM05D001445 ORTHO05D001261 4.0e-08 62.4 167 26.3
Prupe.5G048900 Prunus persica HOM05D001445 ORTHO05D001261 4.0e-08 62.4 168 30.4
Eucgr.D01182 Eucalyptus grandis HOM05D001445 ORTHO05D001261 5.2e-08 62.0 125 33.6
ATR1149G037 Amborella trichopoda HOM05D003556 ORTHO05D003404 1.5e-07 60.5 140 28.6
VMungo0251G1280 Vigna mungo HOM05D001445 ORTHO05D001261 1.5e-07 60.5 135 32.6
CSS0043898 Camellia sinensis var. sinensis HOM05D003556 ORTHO05D003404 2.0e-07 60.1 137 30.7
Prupe.3G007700 Prunus persica HOM05D001578 ORTHO05D001207 2.0e-07 60.1 134 29.1
EL10Ac7g18176 Beta vulgaris HOM05D003556 ORTHO05D003404 2.6e-07 59.7 142 28.9
Duzib052G1048 Durio zibethinus HOM05D001578 ORTHO05D001207 2.6e-07 59.7 160 23.8
Duzib151G1057 Durio zibethinus HOM05D001578 ORTHO05D001207 3.4e-07 59.3 164 23.8
Medtr2g033630 Medicago truncatula HOM05D001578 ORTHO05D001207 3.4e-07 59.3 167 25.7
Duzib133G0465 Durio zibethinus HOM05D003556 ORTHO05D003404 5.7e-07 58.5 170 27.6
FvH4_4g20180 Fragaria vesca HOM05D001578 ORTHO05D001207 5.7e-07 58.5 149 26.2
FAN12G2195 Fragaria x ananassa HOM05D001578 ORTHO05D001207 5.7e-07 58.5 149 26.2
Psat4g219240 Pisum sativum HOM05D001445 ORTHO05D001261 7.5e-07 58.2 133 30.1
Sabra05G0029100 Salix brachista HOM05D014310 ORTHO05D030505 7.5e-07 58.2 129 29.5
SHI15103 Sapria himalayana HOM05D003556 ORTHO05D003404 7.5e-07 58.2 154 28.6
FAN07G0539 Fragaria x ananassa HOM05D001578 ORTHO05D001207 9.8e-07 57.8 149 26.2
CANSAT25G1336 Cannabis sativa HOM05D003556 ORTHO05D003404 1.3e-06 57.4 153 28.8
Solyc01g088590.5 Solanum lycopersicum HOM05D001445 ORTHO05D001261 1.3e-06 57.4 138 25.4
Sopen01g035440 Solanum pennellii HOM05D001445 ORTHO05D001261 1.3e-06 57.4 138 25.4
Potri.010G209800 Populus trichocarpa HOM05D004113 ORTHO05D005233 1.7e-06 57.0 166 30.7
QL12p007390 Quercus lobata HOM05D001445 ORTHO05D001261 1.7e-06 57.0 133 27.1
Migut.B01486 Erythranthe guttata HOM05D001445 ORTHO05D001261 2.8e-06 56.2 136 23.5
Sp6g02140 Schrenkiella parvula HOM05D003556 ORTHO05D003404 2.8e-06 56.2 132 30.3
Ca_22038_v3 Cicer arietinum L. HOM05D001445 ORTHO05D001261 4.9e-06 55.5 133 27.8
Duzib138G0838 Durio zibethinus HOM05D003556 ORTHO05D003404 6.3e-06 55.1 148 26.4
Psat7g183080 Pisum sativum HOM05D003556 ORTHO05D003404 6.3e-06 55.1 159 28.3
TAR365G0682 Trochodendron aralioides HOM05D001578 ORTHO05D001207 8.3e-06 54.7 141 26.2


User provided reference genes

Program Settings