Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.09G166100 Manihot esculenta HOM05D006048 ORTHO05D007642 0.0e+00 1984.9 1030 100.0
Sabra13G0025400 Salix brachista HOM05D006048 ORTHO05D007642 2.0e-216 756.9 1092 45.8
Potri.013G023600 Populus trichocarpa HOM05D006048 ORTHO05D007642 3.4e-216 756.1 1094 44.5
Manes.08G121600 Manihot esculenta HOM05D006048 ORTHO05D007642 2.7e-213 746.5 749 58.3
Potri.005G034100 Populus trichocarpa HOM05D006048 ORTHO05D007642 6.1e-213 745.3 1064 44.6
Sabra05G0036000 Salix brachista HOM05D006048 ORTHO05D007642 6.1e-205 718.8 1083 43.0
TWI56G0330 Tripterygium wilfordii HOM05D006048 ORTHO05D007642 7.0e-177 625.5 1080 40.1
TWI12G1173 Tripterygium wilfordii HOM05D006048 ORTHO05D007642 1.2e-176 624.8 1079 39.9
Haze_04204 Corylus avellana HOM05D006048 ORTHO05D007642 2.3e-172 610.5 1091 38.5
Duzib128G0698 Durio zibethinus HOM05D006048 ORTHO05D007642 4.5e-168 596.3 1068 39.5
Thecc.05G304700 Theobroma cacao HOM05D006048 ORTHO05D007642 2.3e-167 594.0 1056 39.3
Ciclev10000202m.g Citrus clementina HOM05D006048 ORTHO05D007642 1.2e-165 588.2 1045 41.0
Cfa006579 Carpinus fangiana HOM05D006048 ORTHO05D007642 6.8e-164 582.4 1083 38.7
Gohir.D11G274400 Gossypium hirsutum HOM05D006048 ORTHO05D007642 1.2e-149 535.0 1036 37.4
Prupe.6G327100 Prunus persica HOM05D006048 ORTHO05D007642 4.7e-149 533.1 1119 37.3
QL03p006882 Quercus lobata HOM05D006048 ORTHO05D007642 4.7e-149 533.1 1072 36.8
Gorai.007G296200 Gossypium raimondii HOM05D006048 ORTHO05D007642 1.8e-148 531.2 1040 36.9
Gohir.A11G264200 Gossypium hirsutum HOM05D006048 ORTHO05D007642 2.3e-148 530.8 1041 37.1
Cpa.g.sc48.39 Carica papaya HOM05D006048 ORTHO05D007642 2.2e-146 524.2 1055 37.6
MD12G1220300 Malus domestica HOM05D006048 ORTHO05D007642 1.1e-145 521.9 1088 36.8
Actinidia05707 Actinidia chinensis HOM05D006048 ORTHO05D007642 2.4e-145 520.8 1068 36.8
Hma1.2p1_0928F.1_g237870 Hydrangea macrophylla HOM05D006048 ORTHO05D007642 1.8e-140 504.6 1042 36.9
Actinidia23630 Actinidia chinensis HOM05D006048 ORTHO05D007642 9.9e-139 498.8 1065 36.6
MD04G1206500 Malus domestica HOM05D006048 ORTHO05D007642 2.9e-138 497.3 1086 36.0
TAR636G0181 Trochodendron aralioides HOM05D006048 ORTHO05D007642 8.4e-138 495.7 1074 37.1
GSVIVG01000040001 Vitis vinifera HOM05D006048 ORTHO05D007642 8.4e-138 495.7 1104 36.5
COL.COLO4_13482 Corchorus olitorius HOM05D006048 ORTHO05D007642 1.7e-135 488.0 644 46.0
CSS0040601 Camellia sinensis var. sinensis HOM05D006048 ORTHO05D007642 2.8e-133 480.7 645 44.2
FAN14G2795 Fragaria x ananassa HOM05D006048 ORTHO05D007642 8.4e-130 469.2 1076 35.0
FvH4_6g05680 Fragaria vesca HOM05D006048 ORTHO05D007642 9.3e-129 465.7 1056 35.5
FAN14G2991 Fragaria x ananassa HOM05D006048 ORTHO05D007642 2.1e-128 464.5 1075 34.9
RcHm_v2.0_Chr3g0454571 Rosa chinensis HOM05D006048 ORTHO05D007642 1.7e-127 461.5 730 40.8
Dinv23949 Davidia involucrata HOM05D006048 ORTHO05D007642 5.6e-126 456.4 1041 36.6
FAN02G2040 Fragaria x ananassa HOM05D006048 ORTHO05D007642 7.3e-126 456.1 1057 34.8
FAN05G1530 Fragaria x ananassa HOM05D006048 ORTHO05D007642 6.2e-125 453.0 1064 35.1
Rhsim07G0182400 Rhododendron simsii HOM05D006048 ORTHO05D007642 4.5e-123 446.8 1181 33.9
FAN09G2502 Fragaria x ananassa HOM05D006048 ORTHO05D007642 1.4e-121 441.8 1064 34.4
ClCG02G015880 Citrullus lanatus HOM05D006048 ORTHO05D007642 2.1e-117 427.9 1056 34.7
THA.LOC104820894 Tarenaya hassleriana HOM05D006048 ORTHO05D007642 3.4e-115 420.6 1042 33.2
FAN05G2734 Fragaria x ananassa HOM05D006048 ORTHO05D007642 6.4e-114 416.4 1033 34.6
CsaV3_2G005180 Cucumis sativus L. HOM05D006048 ORTHO05D007642 2.3e-111 407.9 1060 33.1
VMungo0720G0675 Vigna mungo HOM05D006048 ORTHO05D007642 3.0e-111 407.5 593 41.3
PGR031G0290 Punica granatum HOM05D006048 ORTHO05D007642 2.5e-110 404.4 1125 32.9
Sopen01g042410 Solanum pennellii HOM05D006048 ORTHO05D007642 3.3e-110 404.1 1134 31.4
PGSC0003DMG401028588 Solanum tuberosum HOM05D006048 ORTHO05D007642 3.3e-110 404.1 1140 31.4
Medtr1g082840 Medicago truncatula HOM05D006048 ORTHO05D007642 9.6e-110 402.5 1087 30.7
TPR.G6104 Trifolium pratense HOM05D006048 ORTHO05D007642 2.8e-109 401.0 1067 31.2
Solyc01g098870.3 Solanum lycopersicum HOM05D006048 ORTHO05D007642 6.2e-109 399.8 1139 31.2
THA.LOC104805873 Tarenaya hassleriana HOM05D006048 ORTHO05D007642 1.4e-108 398.7 1048 32.3
Lalb_Chr21g0310721 Lupinus albus HOM05D006048 ORTHO05D007642 9.0e-108 396.0 739 35.9
CAN.G1077.18 Capsicum annuum HOM05D006048 ORTHO05D007642 1.2e-107 395.6 1099 31.0
MELO3C004275.2 Cucumis melo HOM05D006048 ORTHO05D007642 1.2e-107 395.6 1048 32.9
Peaxi162Scf00037g00236 Petunia axillaris HOM05D006048 ORTHO05D007642 2.0e-107 394.8 1080 31.9
Oeu017488.1 Olea europaea HOM05D006048 ORTHO05D007642 3.4e-107 394.0 670 39.1
Glyma.20G233200 Glycine max HOM05D006048 ORTHO05D007642 4.5e-107 393.7 1078 30.9
Lj5g0003009 Lotus japonicus HOM05D006048 ORTHO05D007642 1.0e-106 392.5 992 33.8
Glyma.10G155100 Glycine max HOM05D006048 ORTHO05D007642 1.1e-105 389.0 741 36.8
Nitab4.5_0005388g0020 Nicotiana tabacum HOM05D006048 ORTHO05D007642 1.4e-105 388.7 1067 31.1
Nitab4.5_0008677g0020 Nicotiana tabacum HOM05D006048 ORTHO05D007642 2.5e-105 387.9 1103 31.0
Nn4g26237 Nelumbo nucifera HOM05D006048 ORTHO05D007642 6.0e-104 383.3 686 38.6
Cc02_g33600 Coffea canephora HOM05D006048 ORTHO05D007642 5.7e-102 376.7 509 44.8
Sed0020620 Sechium edule HOM05D006048 ORTHO05D007642 2.4e-100 371.3 1047 31.9
Ca_10107_v3 Cicer arietinum L. HOM05D006048 ORTHO05D007642 2.6e-99 367.9 752 34.6
Lalb_Chr06g0167761 Lupinus albus HOM05D006048 ORTHO05D007642 3.4e-99 367.5 587 38.7
Phvul.007G180600 Phaseolus vulgaris HOM05D006048 ORTHO05D007642 1.1e-97 362.5 1078 30.1
Aqoxy2G03311 Aquilegia oxysepala HOM05D006048 ORTHO05D007642 1.9e-97 361.7 679 37.1
Migut.B01039 Erythranthe guttata HOM05D006048 ORTHO05D007642 1.9e-97 361.7 1007 33.2
Psat6g149640 Pisum sativum HOM05D006048 ORTHO05D007642 9.4e-97 359.4 601 38.3
Eucgr.H04481 Eucalyptus grandis HOM05D006048 ORTHO05D007642 2.1e-96 358.2 1090 30.0
Sc06g0003370 Simmondsia chinensis HOM05D006048 ORTHO05D007642 7.9e-96 356.3 1002 29.5
AL1G65400 Arabidopsis lyrata HOM05D006048 ORTHO05D007642 1.4e-95 355.5 1093 30.7
Aa31LG2G11800 Aethionema arabicum HOM05D006048 ORTHO05D007642 3.0e-95 354.4 1074 30.6
ECA238G0871 Erigeron canadensis HOM05D006048 ORTHO05D007642 1.3e-93 349.0 713 36.0
MBI19_g16658_MAGBIO Magnolia biondii HOM05D006048 ORTHO05D007642 2.2e-93 348.2 495 43.0
AT1G54920 Arabidopsis thaliana HOM05D006048 ORTHO05D007642 3.1e-92 344.4 1070 30.7
SalBow8G1366 Salvia bowleyana HOM05D006048 ORTHO05D007642 1.0e-90 339.3 1040 30.7
MSTRG.20430 Avicennia marina HOM05D006048 ORTHO05D007642 1.7e-90 338.6 1256 28.7
Nn1g02208 Nelumbo nucifera HOM05D006048 ORTHO05D007642 3.8e-90 337.4 1138 28.7
CARHR284550 Cardamine hirsuta HOM05D006048 ORTHO05D007642 1.4e-89 335.5 733 35.2
SGA_v2.0_scaffold172G38965 Striga asiatica HOM05D006048 ORTHO05D007642 2.3e-87 328.2 452 43.4
Carub.0002s0845 Capsella rubella HOM05D006048 ORTHO05D007642 8.8e-87 326.2 1085 29.7
vmacro05021 Vaccinium macrocarpon HOM05D006048 ORTHO05D007642 5.7e-86 323.6 1111 30.0
BcaC04g22032 Brassica carinata HOM05D006048 ORTHO05D007642 8.2e-85 319.7 1069 30.3
C09p24290 Brassica napus HOM05D006048 ORTHO05D007642 1.1e-84 319.3 1071 29.8
BcaB07g31106 Brassica carinata HOM05D006048 ORTHO05D007642 1.3e-82 312.4 1049 29.6
AUR62000837 Chenopodium quinoa HOM05D006048 ORTHO05D007642 1.3e-82 312.4 507 36.9
AUR62005136 Chenopodium quinoa HOM05D006048 ORTHO05D007642 2.9e-82 311.2 475 38.1
BolC9t55346H Brassica oleracea HOM05D006048 ORTHO05D007642 1.4e-81 308.9 1077 29.6
Ah.06g189270 Amaranthus hybridus HOM05D006048 ORTHO05D007642 2.5e-81 308.1 477 38.6
EL10Ac4g09343 Beta vulgaris HOM05D006048 ORTHO05D007642 4.2e-81 307.4 511 38.0
HanXRQChr15g0463081 Helianthus annuus HOM05D006048 ORTHO05D007642 9.4e-81 306.2 1049 29.6
A09p19290 Brassica napus HOM05D006048 ORTHO05D007642 1.2e-80 305.8 1062 29.3
Hund07062 Selenicereus undatus HOM05D006048 ORTHO05D007642 2.1e-80 305.1 473 38.3
PSO170G0056 Papaver somniferum HOM05D006048 ORTHO05D007642 2.3e-79 301.6 394 42.6
PSO302G0271 Papaver somniferum HOM05D006048 ORTHO05D007642 8.8e-79 299.7 394 42.1
Lsat_1_v5_gn_2_64861 Lactuca sativa HOM05D006048 ORTHO05D007642 3.7e-77 294.3 704 32.2
BraA09t37546Z Brassica rapa HOM05D006048 ORTHO05D007642 9.1e-76 289.7 1073 27.4
CiPaw.07G016800 Carya illinoinensis HOM05D006048 ORTHO05D007642 1.5e-70 272.3 854 29.5
ATR0626G180 Amborella trichopoda HOM05D006048 ORTHO05D007642 9.4e-65 253.1 374 40.4
Atru.chr2.428 Acer truncatum HOM05D006048 ORTHO05D007642 8.8e-63 246.5 182 64.8
CDE05G2441 Ceratophyllum demersum HOM05D006048 ORTHO05D007642 3.0e-55 221.5 396 36.1
SEGI_14627 Sequoiadendron giganteum HOM05D006048 ORTHO05D007642 1.0e-47 196.4 491 29.3
Atru.chr2.429 Acer truncatum HOM05D006048 ORTHO05D007642 2.0e-46 192.2 200 52.0
Psat7g077840 Pisum sativum HOM05D006048 ORTHO05D007642 7.5e-46 190.3 177 51.4
Os11g0148400 Oryza sativa ssp. japonica HOM05D006048 ORTHO05D007642 2.9e-45 188.3 374 33.2
HPP92_011303 Vanilla planifolia HOM05D006048 ORTHO05D007642 1.2e-38 166.4 399 32.3
HPP92_011281 Vanilla planifolia HOM05D006048 ORTHO05D007642 2.9e-37 161.8 394 31.7
Lj9A18T10 Lonicera japonica HOM05D006048 ORTHO05D007642 7.3e-33 147.1 299 37.5
Lj9A29T9 Lonicera japonica HOM05D006048 ORTHO05D007642 1.2e-32 146.4 299 37.5
CDE05G0200 Ceratophyllum demersum HOM05D006048 ORTHO05D007642 6.2e-32 144.1 350 30.9
Mapoly0011s0030 Marchantia polymorpha HOM05D006048 ORTHO05D007642 8.1e-32 143.7 327 28.7
MBI19_g40207_MAGBIO Magnolia biondii HOM05D006048 ORTHO05D007642 5.8e-30 137.5 266 35.3
CiPaw.08G165500 Carya illinoinensis HOM05D006048 ORTHO05D007642 3.6e-24 118.2 82 67.1
AagrBONN_evm.TU.Sc2ySwM_344.3982 Anthoceros agrestis HOM05D006048 ORTHO05D007642 5.2e-23 114.4 466 24.2
Actinidia01443 Actinidia chinensis HOM05D006048 ORTHO05D007642 1.0e-18 100.1 121 43.0
SMO203G0156 Selaginella moellendorffii HOM05D006048 ORTHO05D007642 4.2e-12 78.2 187 28.9
CiPaw.08G165600 Carya illinoinensis HOM05D006048 ORTHO05D007642 8.7e-10 70.5 160 32.5
MBI12_g31451_MAGBIO Magnolia biondii HOM05D006048 ORTHO05D007642 1.5e-09 69.7 97 38.1
Atru.chr2.431 Acer truncatum HOM05D006048 ORTHO05D007642 1.3e-08 66.6 178 35.4
Atru.chr2.430 Acer truncatum HOM05D006048 ORTHO05D007642 5.3e-07 61.2 133 33.1
CDE05G3494 Ceratophyllum demersum HOM05D006048 ORTHO05D007642 4.5e-06 58.2 173 31.8


User provided reference genes

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