Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.09G163400 Manihot esculenta HOM05D006710 ORTHO05D008353 5.5e-136 487.6 250 100.0
Sabra13G0027300 Salix brachista HOM05D006710 ORTHO05D008353 1.9e-104 382.9 254 79.1
QL03p004347 Quercus lobata HOM05D006710 ORTHO05D008353 1.4e-102 376.7 249 79.5
CiPaw.08G166900 Carya illinoinensis HOM05D006710 ORTHO05D008353 4.0e-102 375.2 255 77.6
TWI56G0551 Tripterygium wilfordii HOM05D006710 ORTHO05D008353 1.3e-100 370.2 252 77.8
Cfa006542 Carpinus fangiana HOM05D006710 ORTHO05D008353 3.7e-100 368.6 249 78.7
Potri.013G026500 Populus trichocarpa HOM05D006710 ORTHO05D008353 3.7e-100 368.6 254 76.8
Haze_04239 Corylus avellana HOM05D006710 ORTHO05D008353 1.9e-99 366.3 248 78.2
TWI12G0766 Tripterygium wilfordii HOM05D006710 ORTHO05D008353 2.4e-99 365.9 252 76.6
Dinv40255 Davidia involucrata HOM05D006710 ORTHO05D008353 1.2e-98 363.6 253 75.1
Cpa.g.sc48.8 Carica papaya HOM05D006710 ORTHO05D008353 3.5e-98 362.1 252 76.6
Thecc.05G308800 Theobroma cacao HOM05D006710 ORTHO05D008353 1.5e-96 356.7 250 74.8
Duzib177G0772 Durio zibethinus HOM05D006710 ORTHO05D008353 1.6e-95 353.2 250 74.8
CSS0006596 Camellia sinensis var. sinensis HOM05D006710 ORTHO05D008353 1.5e-93 346.7 250 73.6
Actinidia23607 Actinidia chinensis HOM05D006710 ORTHO05D008353 2.0e-93 346.3 253 73.1
Rhsim07G0179500 Rhododendron simsii HOM05D006710 ORTHO05D008353 4.4e-93 345.1 251 70.9
AUR62005111 Chenopodium quinoa HOM05D006710 ORTHO05D008353 5.8e-93 344.7 254 70.1
Ciclev10002268m.g Citrus clementina HOM05D006710 ORTHO05D008353 2.9e-92 342.4 255 72.5
CSS0018519 Camellia sinensis var. sinensis HOM05D006710 ORTHO05D008353 3.8e-92 342.0 250 73.6
Nn4g26145 Nelumbo nucifera HOM05D006710 ORTHO05D008353 3.8e-92 342.0 256 69.9
Prupe.6G330500 Prunus persica HOM05D006710 ORTHO05D008353 3.8e-92 342.0 249 71.1
Actinidia05724 Actinidia chinensis HOM05D006710 ORTHO05D008353 1.4e-91 340.1 254 73.6
Gorai.013G204100 Gossypium raimondii HOM05D006710 ORTHO05D008353 1.4e-91 340.1 251 70.1
MD04G1209500 Malus domestica HOM05D006710 ORTHO05D008353 2.4e-91 339.3 250 70.8
Gohir.D13G178900 Gossypium hirsutum HOM05D006710 ORTHO05D008353 9.2e-91 337.4 252 70.2
Gohir.D11G272800 Gossypium hirsutum HOM05D006710 ORTHO05D008353 1.6e-90 336.7 250 71.6
Gorai.007G294100 Gossypium raimondii HOM05D006710 ORTHO05D008353 1.6e-90 336.7 250 71.6
Atru.chr2.492 Acer truncatum HOM05D006710 ORTHO05D008353 2.7e-90 335.9 255 72.9
Gohir.A13G173100 Gossypium hirsutum HOM05D006710 ORTHO05D008353 2.7e-90 335.9 252 69.8
COL.COLO4_13519 Corchorus olitorius HOM05D000735 ORTHO05D000838 3.5e-90 335.5 252 71.8
AUR62000864 Chenopodium quinoa HOM05D006710 ORTHO05D008353 6.0e-90 334.7 258 67.4
PGR031G3544 Punica granatum HOM05D006710 ORTHO05D008353 7.8e-90 334.3 212 81.6
CsaV3_2G004900 Cucumis sativus L. HOM05D006710 ORTHO05D008353 2.3e-89 332.8 253 70.0
RcHm_v2.0_Chr3g0454051 Rosa chinensis HOM05D006710 ORTHO05D008353 3.0e-89 332.4 255 72.9
FAN05G4089 Fragaria x ananassa HOM05D006710 ORTHO05D008353 8.6e-89 330.9 254 70.9
CANSAT54G0344 Cannabis sativa HOM05D006710 ORTHO05D008353 3.3e-88 328.9 255 69.4
EL10Ac4g09302 Beta vulgaris HOM05D006710 ORTHO05D008353 7.3e-88 327.8 255 68.2
FAN14G5365 Fragaria x ananassa HOM05D006710 ORTHO05D008353 2.8e-87 325.9 269 68.4
vmacro05032 Vaccinium macrocarpon HOM05D006710 ORTHO05D008353 1.1e-86 323.9 227 73.6
MD12G1224100 Malus domestica HOM05D006710 ORTHO05D008353 1.4e-86 323.6 250 69.2
arahy.Tifrunner.gnm1.ann1.KZLY5F Arachis hypogaea HOM05D006710 ORTHO05D008353 2.4e-86 322.8 226 73.9
THA.LOC104802809 Tarenaya hassleriana HOM05D006710 ORTHO05D008353 2.4e-86 322.8 251 68.9
Eucgr.H04455 Eucalyptus grandis HOM05D006710 ORTHO05D008353 3.1e-86 322.4 250 69.6
Sed0009429 Sechium edule HOM05D006710 ORTHO05D008353 4.0e-86 322.0 263 66.2
arahy.Tifrunner.gnm1.ann1.ACRB0G Arachis hypogaea HOM05D006710 ORTHO05D008353 5.2e-86 321.6 226 73.5
Peaxi162Scf00071g00728 Petunia axillaris HOM05D006710 ORTHO05D008353 8.9e-86 320.9 246 69.5
HanXRQChr09g0258761 Helianthus annuus HOM05D006710 ORTHO05D008353 2.0e-85 319.7 253 68.4
ClCG02G016080 Citrullus lanatus HOM05D006710 ORTHO05D008353 3.4e-85 318.9 250 66.8
MSTRG.20477 Avicennia marina HOM05D006710 ORTHO05D008353 1.3e-84 317.0 244 68.9
Hund07043 Selenicereus undatus HOM05D006710 ORTHO05D008353 1.3e-84 317.0 254 67.7
ECA232G0378 Erigeron canadensis HOM05D006710 ORTHO05D008353 4.9e-84 315.1 252 65.1
CAN.G809.16 Capsicum annuum HOM05D006710 ORTHO05D008353 8.4e-84 314.3 245 68.2
Lalb_Chr15g0077091 Lupinus albus HOM05D006710 ORTHO05D008353 8.4e-84 314.3 255 67.8
Sopen08g012960 Solanum pennellii HOM05D006710 ORTHO05D008353 1.4e-83 313.5 246 68.7
Lj9A681T40 Lonicera japonica HOM05D006710 ORTHO05D008353 2.4e-83 312.8 276 62.7
Solyc08g043180.3 Solanum lycopersicum HOM05D006710 ORTHO05D008353 4.2e-83 312.0 214 74.3
FAN09G4503 Fragaria x ananassa HOM05D006710 ORTHO05D008353 7.1e-83 311.2 296 62.2
PGSC0003DMG400026653 Solanum tuberosum HOM05D006710 ORTHO05D008353 1.2e-82 310.5 246 67.1
Nitab4.5_0010747g0020 Nicotiana tabacum HOM05D006710 ORTHO05D008353 2.1e-82 309.7 245 67.8
Aqoxy2G03215 Aquilegia oxysepala HOM05D006710 ORTHO05D008353 2.7e-82 309.3 250 66.4
Nitab4.5_0000424g0030 Nicotiana tabacum HOM05D006710 ORTHO05D008353 6.0e-82 308.1 245 69.4
SalBow8G3090 Salvia bowleyana HOM05D006710 ORTHO05D008353 6.0e-82 308.1 238 68.1
unitig_0.g2209 Utricularia gibba HOM05D006710 ORTHO05D008353 6.0e-82 308.1 252 65.1
MBI19_g27535_MAGBIO Magnolia biondii HOM05D006710 ORTHO05D008353 1.3e-81 307.0 254 65.4
Ca_10089_v3 Cicer arietinum L. HOM05D006710 ORTHO05D008353 5.1e-81 305.1 239 66.9
CARHR185990 Cardamine hirsuta HOM05D006710 ORTHO05D008353 8.7e-81 304.3 250 64.8
AL6G39620 Arabidopsis lyrata HOM05D006710 ORTHO05D008353 1.5e-80 303.5 252 65.1
CDE08G1170 Ceratophyllum demersum HOM05D006710 ORTHO05D008353 1.5e-80 303.5 216 70.8
Thhalv10004765m.g Eutrema salsugineum HOM05D006710 ORTHO05D008353 3.3e-80 302.4 251 64.5
Lalb_Chr02g0148381 Lupinus albus HOM05D006710 ORTHO05D008353 1.3e-79 300.4 250 64.8
BcaNung02465 Brassica carinata HOM05D006710 ORTHO05D008353 3.6e-79 298.9 251 64.5
Sp2g20620 Schrenkiella parvula HOM05D006710 ORTHO05D008353 3.6e-79 298.9 253 64.4
Carub.0006s2515 Capsella rubella HOM05D006710 ORTHO05D008353 4.8e-79 298.5 252 63.5
Ah.06g190140 Amaranthus hybridus HOM05D006710 ORTHO05D008353 6.2e-79 298.1 251 65.7
Migut.B01148 Erythranthe guttata HOM05D006710 ORTHO05D008353 8.1e-79 297.7 257 63.4
Glyma.10G157000 Glycine max HOM05D006710 ORTHO05D008353 8.1e-79 297.7 235 66.8
FAN14G4294 Fragaria x ananassa HOM05D006710 ORTHO05D008353 2.4e-78 296.2 263 66.2
BcaNung04366 Brassica carinata HOM05D006710 ORTHO05D008353 3.1e-78 295.8 253 64.4
VMungo0720G2835 Vigna mungo HOM05D006710 ORTHO05D008353 4.0e-78 295.4 235 65.1
AT5G27390 Arabidopsis thaliana HOM05D006710 ORTHO05D008353 5.3e-78 295.0 252 63.1
Phvul.007G182300 Phaseolus vulgaris HOM05D006710 ORTHO05D008353 1.5e-77 293.5 251 63.3
Sc09g0003360 Simmondsia chinensis HOM05D006710 ORTHO05D006029 4.5e-77 292.0 162 85.8
Lj5g0024082 Lotus japonicus HOM05D006710 ORTHO05D008353 5.8e-77 291.6 251 64.9
ATR0626G338 Amborella trichopoda HOM05D006710 ORTHO05D008353 9.9e-77 290.8 238 65.1
Os05g0401300 Oryza sativa ssp. japonica HOM05D006710 ORTHO05D008353 4.9e-76 288.5 243 60.9
Gohir.A11G262800 Gossypium hirsutum HOM05D006710 ORTHO05D008353 1.1e-75 287.3 221 68.8
C07p40720 Brassica napus HOM05D006710 ORTHO05D008353 1.6e-74 283.5 263 61.2
BolC7t44600H Brassica oleracea HOM05D006710 ORTHO05D008353 1.6e-74 283.5 263 61.2
Zm00001eb346790 Zea mays HOM05D006710 ORTHO05D008353 2.1e-74 283.1 193 70.5
A06p37590 Brassica napus HOM05D006710 ORTHO05D008353 2.7e-74 282.7 261 61.7
HPP92_013667 Vanilla planifolia HOM05D006710 ORTHO05D008353 6.0e-74 281.6 250 62.0
Psat6g148920 Pisum sativum HOM05D006710 ORTHO05D008353 8.7e-73 277.7 252 58.7
PSO407G0185 Papaver somniferum HOM05D006710 ORTHO05D008353 1.1e-72 277.3 251 58.6
PSO170G1405 Papaver somniferum HOM05D006710 ORTHO05D008353 1.9e-72 276.6 247 58.7
Medtr1g082430 Medicago truncatula HOM05D006710 ORTHO05D008353 5.3e-70 268.5 254 56.7
Lsat_1_v5_gn_8_116001 Lactuca sativa HOM05D006710 ORTHO05D008353 2.9e-68 262.7 219 63.9
Aa31LG11G9170 Aethionema arabicum HOM05D006710 ORTHO05D008353 3.8e-68 262.3 278 55.8
GSVIVG01000003001 Vitis vinifera HOM05D006710 ORTHO05D008353 2.4e-67 259.6 145 89.0
SGA_v2.0_scaffold244G44356 Striga asiatica HOM05D006710 ORTHO05D008353 7.1e-67 258.1 240 58.8
TAR362G0522 Trochodendron aralioides HOM05D006710 ORTHO05D008353 1.8e-65 253.4 145 87.6
SEGI_09082 Sequoiadendron giganteum HOM05D006710 ORTHO05D008353 4.3e-64 248.8 215 57.7
BraA06t26678Z Brassica rapa HOM05D006710 ORTHO05D008353 1.6e-63 246.9 240 59.6
CDE02G4396 Ceratophyllum demersum HOM05D000137 ORTHO05D000503 2.9e-60 236.1 204 65.2
MELO3C004308.2 Cucumis melo HOM05D006710 ORTHO05D008353 5.9e-53 211.8 178 65.7
FAN05G4701 Fragaria x ananassa HOM05D006710 ORTHO05D008353 4.2e-51 205.7 242 53.7
Glyma.20G231700 Glycine max HOM05D006710 ORTHO05D008353 4.6e-50 202.2 134 73.9
TPR.G327 Trifolium pratense HOM05D006710 ORTHO05D008353 6.7e-49 198.4 179 58.1
AagrBONN_evm.TU.Sc2ySwM_368.548 Anthoceros agrestis HOM05D006710 ORTHO05D008353 7.4e-48 194.9 216 45.8
FvH4_6g05310 Fragaria vesca HOM05D006710 ORTHO05D008353 8.5e-44 181.4 167 64.1
Mapoly0057s0090 Marchantia polymorpha HOM05D006710 ORTHO05D008353 2.5e-43 179.9 185 47.0
Cc02_g32640 Coffea canephora HOM05D006710 ORTHO05D008353 1.2e-42 177.6 95 90.5
Pp3c11_21800 Physcomitrium patens HOM05D006710 ORTHO05D008353 1.0e-41 174.5 179 47.5
Cc02_g32660 Coffea canephora HOM05D006710 ORTHO05D008353 6.7e-41 171.8 154 64.3
SMO356G0400 Selaginella moellendorffii HOM05D006710 ORTHO05D008353 2.6e-40 169.9 200 47.0
DCAR_022246 Daucus carota HOM05D006710 ORTHO05D008353 2.2e-36 156.8 152 58.6
FAN02G1407 Fragaria x ananassa HOM05D006710 ORTHO05D008353 1.1e-32 144.4 141 62.4
EL10Ac7g17500 Beta vulgaris HOM05D006710 ORTHO05D008353 2.2e-28 130.2 96 66.7
Thecc.05G311300 Theobroma cacao HOM05D000126 ORTHO05D008353 3.0e-25 119.8 68 83.8
CBR_g32459 Chara braunii HOM05D000019 ORTHO05D000353 7.5e-16 88.6 214 29.0
MCO13G061 Micromonas commoda HOM05D006710 ORTHO05D008353 6.3e-15 85.5 132 35.6
Cre13.g564050 Chlamydomonas reinhardtii HOM05D006710 ORTHO05D008353 5.5e-11 72.4 139 31.7
HPP92_013649 Vanilla planifolia HOM05D006710 ORTHO05D008353 8.3e-07 58.5 35 80.0
Dinv22904 Davidia involucrata HOM05D006710 ORTHO05D008353 1.4e-06 57.8 62 48.4


User provided reference genes

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