Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.09G141600 Manihot esculenta HOM05D006263 ORTHO05D007549 4.9e-207 724.2 348 100.0
Potri.006G233200 Populus trichocarpa HOM05D006263 ORTHO05D007549 8.2e-162 573.9 345 78.3
TWI34G1357 Tripterygium wilfordii HOM05D006263 ORTHO05D007549 1.0e-156 557.0 351 75.8
Potri.019G034400 Populus trichocarpa HOM05D006263 ORTHO05D007549 7.4e-155 550.8 349 74.5
Sabra19G0044500 Salix brachista HOM05D006263 ORTHO05D007549 1.5e-152 543.1 349 73.4
Duzib177G1028 Durio zibethinus HOM05D006263 ORTHO05D007549 1.6e-149 533.1 344 73.3
Gohir.A11G259300 Gossypium hirsutum HOM05D006263 ORTHO05D007549 1.6e-149 533.1 342 71.6
Gorai.007G289300 Gossypium raimondii HOM05D006263 ORTHO05D007549 2.1e-149 532.7 342 71.1
Thecc.05G294200 Theobroma cacao HOM05D006263 ORTHO05D007549 2.7e-149 532.3 352 72.7
Gohir.D11G269500 Gossypium hirsutum HOM05D006263 ORTHO05D007549 4.6e-149 531.6 342 71.1
COL.COLO4_13602 Corchorus olitorius HOM05D006263 ORTHO05D007549 6.7e-148 527.7 343 72.9
Ciclev10020896m.g Citrus clementina HOM05D006263 ORTHO05D007549 5.7e-147 524.6 351 70.9
C09p58780 Brassica napus HOM05D006263 ORTHO05D007549 9.7e-147 523.9 352 68.8
Sabra19G0042300 Salix brachista HOM05D006263 ORTHO05D007549 1.3e-146 523.5 395 65.1
BcaB08g36696 Brassica carinata HOM05D006263 ORTHO05D007549 2.2e-146 522.7 349 68.8
BcaC04g18720 Brassica carinata HOM05D006263 ORTHO05D007549 2.8e-146 522.3 352 69.0
A10p21320 Brassica napus HOM05D006263 ORTHO05D007549 4.8e-146 521.5 348 69.0
BolC9t58720H Brassica oleracea HOM05D006263 ORTHO05D007549 4.8e-146 521.5 353 69.1
BraA10t44195Z Brassica rapa HOM05D006263 ORTHO05D007549 6.3e-146 521.2 348 68.7
Sp6g26120 Schrenkiella parvula HOM05D006263 ORTHO05D007549 1.1e-145 520.4 353 69.4
TAR623G0038 Trochodendron aralioides HOM05D006263 ORTHO05D007549 6.9e-145 517.7 342 71.9
Atru.chr2.1379 Acer truncatum HOM05D006263 ORTHO05D007549 1.5e-144 516.5 348 71.0
Cfa016439 Carpinus fangiana HOM05D006263 ORTHO05D007549 5.9e-144 514.6 343 71.4
Haze_19416 Corylus avellana HOM05D006263 ORTHO05D007549 1.7e-143 513.1 346 71.4
Thhalv10013996m.g Eutrema salsugineum HOM05D006263 ORTHO05D007549 2.2e-143 512.7 351 68.4
Haze_19445 Corylus avellana HOM05D006263 ORTHO05D007549 6.5e-143 511.1 346 71.1
Dinv14580 Davidia involucrata HOM05D006263 ORTHO05D007549 6.5e-143 511.1 348 70.4
Carub.0006s1648 Capsella rubella HOM05D006263 ORTHO05D007549 1.4e-142 510.0 336 69.3
THA.LOC104827270 Tarenaya hassleriana HOM05D006263 ORTHO05D007549 1.9e-142 509.6 336 70.5
GSVIVG01033398001 Vitis vinifera HOM05D006263 ORTHO05D007549 1.9e-142 509.6 335 71.0
AL6G29400 Arabidopsis lyrata HOM05D006263 ORTHO05D007549 2.5e-142 509.2 336 70.2
AT5G18200 Arabidopsis thaliana HOM05D006263 ORTHO05D007549 2.7e-141 505.8 336 69.0
Prupe.7G003700 Prunus persica HOM05D006263 ORTHO05D007549 3.0e-140 502.3 336 71.1
CARHR194860 Cardamine hirsuta HOM05D006263 ORTHO05D007549 3.9e-140 501.9 336 68.8
Psat1g096040 Pisum sativum HOM05D006263 ORTHO05D007549 2.0e-139 499.6 342 67.3
CiPaw.10G000900 Carya illinoinensis HOM05D006263 ORTHO05D007549 3.3e-139 498.8 342 70.8
Oeu060008.1 Olea europaea HOM05D006263 ORTHO05D007549 5.7e-139 498.0 341 69.8
Phvul.004G080400 Phaseolus vulgaris HOM05D006263 ORTHO05D007549 1.7e-138 496.5 337 70.6
Glyma.16G153300 Glycine max HOM05D006263 ORTHO05D007549 6.3e-138 494.6 348 68.1
VMungo0464G2181 Vigna mungo HOM05D006263 ORTHO05D007549 6.3e-138 494.6 337 69.7
MELO3C006156.2 Cucumis melo HOM05D006263 ORTHO05D007549 8.2e-138 494.2 346 68.2
Rhsim04G0087300 Rhododendron simsii HOM05D006263 ORTHO05D007549 1.2e-136 490.3 341 69.2
Aa31LG11G11400 Aethionema arabicum HOM05D006263 ORTHO05D007549 2.6e-136 489.2 370 63.8
CANSAT78G2484 Cannabis sativa HOM05D006263 ORTHO05D007549 2.6e-136 489.2 345 66.7
ClCG05G001960 Citrullus lanatus HOM05D006263 ORTHO05D007549 5.9e-136 488.0 346 67.1
MD12G1003100 Malus domestica HOM05D006263 ORTHO05D007549 5.9e-136 488.0 339 69.3
Lj6g0008715 Lotus japonicus HOM05D006263 ORTHO05D007549 1.0e-135 487.3 338 68.6
Lj2A357T95 Lonicera japonica HOM05D006263 ORTHO05D007549 2.2e-135 486.1 352 68.2
Aqoxy1G00489 Aquilegia oxysepala HOM05D006263 ORTHO05D007549 2.9e-135 485.7 338 68.0
DCAR_013689 Daucus carota HOM05D006263 ORTHO05D007549 2.9e-135 485.7 338 68.9
Nn7g35844 Nelumbo nucifera HOM05D006263 ORTHO05D007549 8.5e-135 484.2 335 68.4
Lalb_Chr06g0173981 Lupinus albus HOM05D006263 ORTHO05D007549 1.2e-133 480.3 348 66.7
arahy.Tifrunner.gnm1.ann1.NGU2DL Arachis hypogaea HOM05D006263 ORTHO05D007549 1.6e-133 479.9 337 65.9
PGR042G1093 Punica granatum HOM05D006263 ORTHO05D007549 1.6e-133 479.9 342 67.5
Migut.B01469 Erythranthe guttata HOM05D006263 ORTHO05D007549 2.1e-133 479.6 337 67.1
CSS0025413 Camellia sinensis var. sinensis HOM05D006263 ORTHO05D007549 2.7e-133 479.2 336 68.8
Ca_04490_v3 Cicer arietinum L. HOM05D006263 ORTHO05D007549 8.0e-133 477.6 346 65.3
QL07p019666 Quercus lobata HOM05D006263 ORTHO05D007549 1.0e-132 477.2 344 66.3
PSO339G1401 Papaver somniferum HOM05D006263 ORTHO05D007549 1.4e-132 476.9 339 67.6
CAN.G216.5 Capsicum annuum HOM05D006263 ORTHO05D007549 1.8e-132 476.5 346 66.5
PSO384G1918 Papaver somniferum HOM05D006263 ORTHO05D007549 2.3e-132 476.1 338 66.3
Solyc10g050850.2 Solanum lycopersicum HOM05D006263 ORTHO05D007549 3.0e-132 475.7 342 67.3
Eucgr.L01413 Eucalyptus grandis HOM05D006263 ORTHO05D007549 2.0e-131 473.0 343 65.6
Sopen10g022420 Solanum pennellii HOM05D006263 ORTHO05D007549 2.0e-131 473.0 342 66.4
PGSC0003DMG400008259 Solanum tuberosum HOM05D006263 ORTHO05D007549 2.0e-131 473.0 342 67.0
Eucgr.K02258 Eucalyptus grandis HOM05D006263 ORTHO05D007549 5.7e-131 471.5 343 65.3
RcHm_v2.0_Chr3g0497171 Rosa chinensis HOM05D006263 ORTHO05D007549 1.7e-130 469.9 345 64.3
Cc06_g22910 Coffea canephora HOM05D006263 ORTHO05D007549 2.2e-130 469.5 341 66.9
Nitab4.5_0002825g0060 Nicotiana tabacum HOM05D006263 ORTHO05D007549 3.7e-130 468.8 342 64.0
Medtr6g029470 Medicago truncatula HOM05D006263 ORTHO05D007549 3.1e-129 465.7 344 65.1
Nitab4.5_0000001g0100 Nicotiana tabacum HOM05D006263 ORTHO05D007549 4.1e-129 465.3 343 63.6
TAR369G0989 Trochodendron aralioides HOM05D006263 ORTHO05D007549 4.1e-129 465.3 339 66.7
HanXRQChr01g0024721 Helianthus annuus HOM05D006263 ORTHO05D007549 1.6e-128 463.4 347 64.8
Hund06464 Selenicereus undatus HOM05D006263 ORTHO05D007549 2.0e-128 463.0 348 64.4
Lsat_1_v5_gn_1_59641 Lactuca sativa HOM05D006263 ORTHO05D007549 3.5e-128 462.2 342 64.9
SGA_v2.0_scaffold145G36025 Striga asiatica HOM05D006263 ORTHO05D007549 5.9e-128 461.5 338 63.9
MSTRG.20649 Avicennia marina HOM05D006263 ORTHO05D007549 1.0e-127 460.7 338 65.1
FvH4_1g28080 Fragaria vesca HOM05D006263 ORTHO05D007549 2.5e-126 456.1 339 65.2
FAN23G2537 Fragaria x ananassa HOM05D006263 ORTHO05D007549 2.5e-126 456.1 339 65.5
FAN19G0970 Fragaria x ananassa HOM05D006263 ORTHO05D007549 3.2e-126 455.7 339 65.2
FAN28G0550 Fragaria x ananassa HOM05D006263 ORTHO05D007549 6.1e-125 451.4 339 64.6
ECA285G0004 Erigeron canadensis HOM05D006263 ORTHO05D007549 8.0e-125 451.1 343 62.4
CDE02G1162 Ceratophyllum demersum HOM05D006263 ORTHO05D007549 4.0e-124 448.7 339 61.9
FAN26G0246 Fragaria x ananassa HOM05D006263 ORTHO05D007549 6.8e-124 448.0 339 64.9
AUR62012878 Chenopodium quinoa HOM05D006263 ORTHO05D007549 3.4e-123 445.7 349 62.8
Cpa.g.sc51.112 Carica papaya HOM05D006263 ORTHO05D007549 2.8e-122 442.6 349 63.0
AUR62027102 Chenopodium quinoa HOM05D006263 ORTHO05D007549 2.8e-122 442.6 348 61.8
FAN28G1368 Fragaria x ananassa HOM05D006263 ORTHO05D007549 4.8e-122 441.8 339 63.4
Peaxi162Scf00076g01055 Petunia axillaris HOM05D006263 ORTHO05D007549 1.2e-120 437.2 345 60.9
ATR0697G038 Amborella trichopoda HOM05D006263 ORTHO05D007549 2.0e-120 436.4 377 59.4
Ca_04491_v3 Cicer arietinum L. HOM05D006263 ORTHO05D000429 5.9e-120 434.9 342 61.1
unitig_26.g9717 Utricularia gibba HOM05D006263 ORTHO05D007549 1.1e-118 430.6 337 59.6
HPP92_015639 Vanilla planifolia HOM05D006263 ORTHO05D007549 1.1e-118 430.6 338 60.1
Zm00001eb301000 Zea mays HOM05D006263 ORTHO05D007549 1.2e-117 427.2 350 57.7
vmacro09144 Vaccinium macrocarpon HOM05D006263 ORTHO05D007549 2.7e-117 426.0 343 60.9
TPR.G34629 Trifolium pratense HOM05D006263 ORTHO05D007549 2.3e-116 422.9 337 60.2
SalBow5G0264 Salvia bowleyana HOM05D006263 ORTHO05D007549 6.8e-116 421.4 337 61.4
Psat1g096000 Pisum sativum HOM05D006263 ORTHO05D007549 7.0e-113 411.4 338 59.8
EL10Ac9g22064 Beta vulgaris HOM05D006263 ORTHO05D007549 1.0e-111 407.5 348 58.3
Medtr6g029530 Medicago truncatula HOM05D006263 ORTHO05D007549 1.6e-109 400.2 335 57.0
Sc18g0007080 Simmondsia chinensis HOM05D006263 ORTHO05D007549 1.6e-109 400.2 335 58.5
Actinidia17306 Actinidia chinensis HOM05D000412 ORTHO05D000429 1.4e-108 397.1 288 68.1
Oeu003888.1 Olea europaea HOM05D006263 ORTHO05D007549 2.6e-107 392.9 267 70.4
Ah.01g007390 Amaranthus hybridus HOM05D006263 ORTHO05D007549 1.1e-105 387.5 438 47.3
MBI11_g31289_MAGBIO Magnolia biondii HOM05D006263 ORTHO05D007549 1.0e-103 380.9 354 56.2
SEGI_37923 Sequoiadendron giganteum HOM05D006263 ORTHO05D007549 2.5e-102 376.3 350 52.3
CsaV3_3G009370 Cucumis sativus L. HOM05D006263 ORTHO05D007549 3.2e-97 359.4 262 66.8
Sed0020840 Sechium edule HOM05D006263 ORTHO05D007549 1.0e-95 354.4 262 67.2
Eucgr.A02096 Eucalyptus grandis HOM05D006263 ORTHO05D007549 1.3e-95 354.0 290 61.0
Os07g0171200 Oryza sativa ssp. japonica HOM05D006263 ORTHO05D007549 4.3e-86 322.4 237 62.4
Hma1.2p1_0376F.1_g139140 Hydrangea macrophylla HOM05D006263 ORTHO05D007549 7.1e-81 305.1 190 74.7
Hma1.2p1_0376F.1_g139150 Hydrangea macrophylla HOM05D006263 ORTHO05D007549 9.2e-81 304.7 183 77.0
Mapoly0103s0062 Marchantia polymorpha HOM05D006263 ORTHO05D007549 3.3e-78 296.2 342 44.7
Pp3c17_20460 Physcomitrium patens HOM05D006263 ORTHO05D007549 2.1e-72 276.9 340 41.8
SMO367G0539 Selaginella moellendorffii HOM05D006263 ORTHO05D007549 1.7e-66 257.3 339 40.7
FAN16G0439 Fragaria x ananassa HOM05D006263 ORTHO05D007549 2.5e-62 243.4 213 57.7
RhsimUnG0048700 Rhododendron simsii HOM05D006263 ORTHO05D007549 3.8e-50 203.0 179 60.3
FAN18G1683 Fragaria x ananassa HOM05D000349 ORTHO05D007549 6.0e-48 195.7 199 51.3
Pp3c2_1350 Physcomitrium patens HOM05D006263 ORTHO05D007549 1.0e-47 194.9 253 40.7
FAN06G4136 Fragaria x ananassa HOM05D000349 ORTHO05D007549 9.6e-46 188.3 190 51.1
Hma1.2p1_0376F.1_g139120 Hydrangea macrophylla HOM05D006263 ORTHO05D007549 8.2e-45 185.3 166 60.2
FAN18G1526 Fragaria x ananassa HOM05D000349 ORTHO05D007549 2.1e-40 170.6 177 50.8
FAN24G0044 Fragaria x ananassa HOM05D006263 ORTHO05D007549 6.3e-37 159.1 209 42.1
TPR.G18346 Trifolium pratense HOM05D006263 ORTHO05D007549 5.9e-27 125.9 81 70.4
SMO275G0019 Selaginella moellendorffii HOM05D006263 ORTHO05D007549 9.7e-22 108.6 129 42.6
FAN03G3217 Fragaria x ananassa HOM05D002676 ORTHO05D003194 7.2e-17 92.4 60 70.0
FAN11G1140 Fragaria x ananassa HOM05D002676 ORTHO05D003194 7.2e-17 92.4 60 70.0
FAN22G0360 Fragaria x ananassa HOM05D002676 ORTHO05D003194 7.2e-17 92.4 60 70.0
SMO367G0580 Selaginella moellendorffii HOM05D006263 ORTHO05D378923 2.1e-16 90.9 107 43.0
FAN22G1437 Fragaria x ananassa HOM05D002676 ORTHO05D007549 6.1e-16 89.4 60 68.3
FAN15G0659 Fragaria x ananassa HOM05D006263 ORTHO05D007549 7.5e-14 82.4 96 45.8
FAN08G1181 Fragaria x ananassa HOM05D003914 ORTHO05D001189 3.7e-13 80.1 76 53.9
FAN27G3525 Fragaria x ananassa HOM05D003914 ORTHO05D001189 3.7e-13 80.1 76 53.9
FAN25G1138 Fragaria x ananassa HOM05D012843 ORTHO05D017973 9.1e-12 75.5 76 48.7
FAN22G0951 Fragaria x ananassa HOM05D000005 ORTHO05D000294 1.2e-11 75.1 76 48.7
FAN12G3135 Fragaria x ananassa HOM05D000005 ORTHO05D000294 3.5e-11 73.6 76 47.4
Phvul.004G082000 Phaseolus vulgaris HOM05D006263 ORTHO05D007549 3.8e-10 70.1 60 55.0
FAN09G2057 Fragaria x ananassa HOM05D000005 ORTHO05D000294 1.9e-09 67.8 57 52.6
FAN22G2156 Fragaria x ananassa HOM05D002676 ORTHO05D003194 4.7e-08 63.2 69 46.4
SHI23126 Sapria himalayana HOM05D006263 ORTHO05D007549 4.4e-06 56.6 110 30.9


User provided reference genes

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