Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.09G128701 Manihot esculenta HOM05D004434 ORTHO05D000365 8.4e-99 363.6 174 100.0
Manes.05G049900 Manihot esculenta HOM05D004434 ORTHO05D000365 1.9e-74 282.7 166 84.3
Manes.01G269700 Manihot esculenta HOM05D004434 ORTHO05D000365 1.0e-48 197.2 177 62.1
Potri.014G066500 Populus trichocarpa HOM05D004434 ORTHO05D000365 2.0e-39 166.4 166 57.2
Thecc.01G385200 Theobroma cacao HOM05D004434 ORTHO05D000365 1.3e-38 163.7 167 54.5
Sabra14G0046500 Salix brachista HOM05D004434 ORTHO05D000365 2.7e-36 156.0 166 55.4
Duzib138G1022 Durio zibethinus HOM05D004434 ORTHO05D000365 3.5e-36 155.6 166 52.4
Duzib133G0507 Durio zibethinus HOM05D004434 ORTHO05D000365 5.0e-35 151.8 164 51.8
Gorai.007G088300 Gossypium raimondii HOM05D004434 ORTHO05D000365 4.7e-33 145.2 159 49.1
Gohir.D11G082600 Gossypium hirsutum HOM05D004434 ORTHO05D000365 6.1e-33 144.8 159 49.1
Potri.002G143300 Populus trichocarpa HOM05D004434 ORTHO05D000365 4.0e-32 142.1 165 54.5
Dinv43662 Davidia involucrata HOM05D004434 ORTHO05D000365 8.8e-32 141.0 176 48.3
Sabra02G0111700 Salix brachista HOM05D004434 ORTHO05D000365 2.6e-31 139.4 173 52.0
Gohir.A11G078200 Gossypium hirsutum HOM05D004434 ORTHO05D000365 1.7e-30 136.7 159 47.2
TAR629G0313 Trochodendron aralioides HOM05D004434 ORTHO05D000365 4.5e-28 128.6 168 50.6
Dinv44112 Davidia involucrata HOM05D004434 ORTHO05D000365 2.9e-27 125.9 167 49.1
MD07G1113200 Malus domestica HOM05D004434 ORTHO05D000365 6.5e-27 124.8 173 48.0
GSVIVG01018164001 Vitis vinifera HOM05D004434 ORTHO05D000365 4.2e-26 122.1 187 46.0
COL.COLO4_12473 Corchorus olitorius HOM05D004434 ORTHO05D000365 9.5e-26 120.9 164 45.7
Cfa011141 Carpinus fangiana HOM05D004434 ORTHO05D000365 6.1e-25 118.2 180 46.1
Hma1.2p1_0301F.1_g118230 Hydrangea macrophylla HOM05D004434 ORTHO05D000365 1.0e-24 117.5 172 45.3
TWI14G0925 Tripterygium wilfordii HOM05D004434 ORTHO05D000365 3.0e-24 115.9 185 42.7
Prupe.2G136300 Prunus persica HOM05D004434 ORTHO05D000365 8.9e-24 114.4 175 46.3
QL04p035929 Quercus lobata HOM05D004434 ORTHO05D000365 1.2e-23 114.0 186 45.7
Oeu061521.1 Olea europaea HOM05D004434 ORTHO05D000365 3.4e-23 112.5 167 41.9
Cpa.g.sc212.4 Carica papaya HOM05D004434 ORTHO05D000365 4.4e-23 112.1 158 50.0
Eucgr.D02499 Eucalyptus grandis HOM05D004434 ORTHO05D000365 7.5e-23 111.3 197 42.6
CiPaw.13G031500 Carya illinoinensis HOM05D004434 ORTHO05D000365 3.7e-22 109.0 175 43.4
Haze_02718 Corylus avellana HOM05D004434 ORTHO05D000365 8.3e-22 107.8 166 46.4
Oeu000035.2 Olea europaea HOM05D004434 ORTHO05D000365 1.8e-21 106.7 166 47.6
Gorai.008G106900 Gossypium raimondii HOM05D004434 ORTHO05D000365 2.4e-21 106.3 176 45.5
Nn6g33946 Nelumbo nucifera HOM05D004434 ORTHO05D000365 5.4e-21 105.1 176 41.5
Gohir.D12G098100 Gossypium hirsutum HOM05D004434 ORTHO05D000365 9.2e-21 104.4 176 44.9
Lj1g0013991 Lotus japonicus HOM05D004434 ORTHO05D000365 9.2e-21 104.4 172 43.6
Gohir.A12G095500 Gossypium hirsutum HOM05D004434 ORTHO05D000365 1.6e-20 103.6 174 46.0
Lj9C564T0 Lonicera japonica HOM05D004434 ORTHO05D000365 3.5e-20 102.4 164 41.5
Ca_27604_v3 Cicer arietinum L. HOM05D004434 ORTHO05D000365 5.9e-20 101.7 160 45.0
Medtr7g039110 Medicago truncatula HOM05D004434 ORTHO05D000365 5.9e-20 101.7 163 43.6
QL04p037370 Quercus lobata HOM05D000017 ORTHO05D000013 7.8e-20 101.3 190 40.5
QL11p032217 Quercus lobata HOM05D000017 ORTHO05D000013 7.8e-20 101.3 190 40.5
Rhsim07G0032300 Rhododendron simsii HOM05D004434 ORTHO05D000365 3.8e-19 99.0 154 47.4
Psat3g156680 Pisum sativum HOM05D004434 ORTHO05D000365 1.1e-18 97.4 173 38.2
MSTRG.28172 Avicennia marina HOM05D004434 ORTHO05D000365 5.6e-18 95.1 132 44.7
Nn1g00983 Nelumbo nucifera HOM05D004434 ORTHO05D000365 5.6e-18 95.1 169 41.4
FAN10G0381 Fragaria x ananassa HOM05D004434 ORTHO05D000365 2.1e-17 93.2 183 41.0
FAN10G1781 Fragaria x ananassa HOM05D004434 ORTHO05D000365 2.1e-17 93.2 183 41.0
FAN03G0453 Fragaria x ananassa HOM05D004434 ORTHO05D000365 3.6e-17 92.4 183 41.0
Glyma.01G076900 Glycine max HOM05D004434 ORTHO05D000365 6.1e-17 91.7 164 39.0
RcHm_v2.0_Chr1g0348781 Rosa chinensis HOM05D004434 ORTHO05D000365 6.1e-17 91.7 180 40.0
arahy.Tifrunner.gnm1.ann1.XPK4NL Arachis hypogaea HOM05D004434 ORTHO05D000365 8.0e-17 91.3 158 39.2
FvH4_7g10840 Fragaria vesca HOM05D004434 ORTHO05D000365 8.0e-17 91.3 184 40.8
FAN01G2954 Fragaria x ananassa HOM05D004434 ORTHO05D000365 8.0e-17 91.3 183 40.4
arahy.Tifrunner.gnm1.ann1.F2RES5 Arachis hypogaea HOM05D004434 ORTHO05D000365 1.4e-16 90.5 164 39.6
TPR.G39043 Trifolium pratense HOM05D004434 ORTHO05D000365 1.2e-15 87.4 170 38.8
Aqoxy5G03868 Aquilegia oxysepala HOM05D004434 ORTHO05D000365 1.5e-15 87.0 168 38.1
Phvul.008G144300 Phaseolus vulgaris HOM05D004434 ORTHO05D000365 1.5e-15 87.0 161 39.1
Cc02_g24640 Coffea canephora HOM05D004434 ORTHO05D000365 2.6e-15 86.3 170 38.2
FAN06G1690 Fragaria x ananassa HOM05D004434 ORTHO05D000365 3.4e-15 85.9 167 42.5
VMungo1383G3194 Vigna mungo HOM05D004434 ORTHO05D000365 5.8e-15 85.1 145 42.1
Ciclev10020053m.g Citrus clementina HOM05D004434 ORTHO05D000365 1.7e-14 83.6 168 40.5
Glyma.11G166128 Glycine max HOM05D004434 ORTHO05D000365 1.7e-14 83.6 169 37.3
CiPaw.14G024800 Carya illinoinensis HOM05D004434 ORTHO05D000365 2.2e-14 83.2 154 40.3
MBI04_g09506_MAGBIO Magnolia biondii HOM05D004434 ORTHO05D000365 2.2e-14 83.2 167 37.7
CSS0014185 Camellia sinensis var. sinensis HOM05D004434 ORTHO05D000365 2.9e-14 82.8 151 40.4
vmacro13455 Vaccinium macrocarpon HOM05D004434 ORTHO05D000365 4.1e-13 79.0 157 42.0
Migut.B01581 Erythranthe guttata HOM05D004434 ORTHO05D000365 7.0e-13 78.2 159 39.6
Atru.chr5.222 Acer truncatum HOM05D004434 ORTHO05D000365 1.2e-12 77.4 181 37.0
DCAR_025094 Daucus carota HOM05D004434 ORTHO05D000365 1.2e-12 77.4 160 39.4
Actinidia12177 Actinidia chinensis HOM05D004434 ORTHO05D000365 3.5e-12 75.9 65 56.9
MSTRG.4915 Avicennia marina HOM05D004434 ORTHO05D000365 3.5e-12 75.9 130 43.8
Lsat_1_v5_gn_3_129041 Lactuca sativa HOM05D004434 ORTHO05D000365 2.3e-11 73.2 161 38.5
ECA240G3600 Erigeron canadensis HOM05D004434 ORTHO05D000365 5.0e-11 72.0 166 36.7
PGSC0003DMG400025976 Solanum tuberosum HOM05D004434 ORTHO05D000365 5.0e-11 72.0 174 37.4
Lsat_1_v5_gn_7_10141 Lactuca sativa HOM05D004434 ORTHO05D000365 8.6e-11 71.2 175 36.0
Carub.0006s3717 Capsella rubella HOM05D004434 ORTHO05D000365 1.9e-10 70.1 165 39.4
Sopen01g036520 Solanum pennellii HOM05D004434 ORTHO05D000365 1.9e-10 70.1 175 37.1
PGR004G2137 Punica granatum HOM05D004434 ORTHO05D000365 3.3e-10 69.3 195 38.5
MSTRG.20724 Avicennia marina HOM05D004434 ORTHO05D000365 4.3e-10 68.9 122 37.7
CANSAT21G1995 Cannabis sativa HOM05D004434 ORTHO05D000365 4.3e-10 68.9 134 39.6
Peaxi162Scf00441g00317 Petunia axillaris HOM05D004434 ORTHO05D000365 4.3e-10 68.9 132 37.9
Nitab4.5_0001026g0100 Nicotiana tabacum HOM05D004434 ORTHO05D000365 1.2e-09 67.4 158 41.8
AL6G53460 Arabidopsis lyrata HOM05D004434 ORTHO05D000365 2.1e-09 66.6 138 40.6
AT4G00050 Arabidopsis thaliana HOM05D004434 ORTHO05D000365 3.6e-09 65.9 138 41.3
SalBow5G5182 Salvia bowleyana HOM05D004434 ORTHO05D000365 4.7e-09 65.5 114 37.7
Peaxi162Scf00273g00613 Petunia axillaris HOM05D004434 ORTHO05D000365 6.2e-09 65.1 120 39.2
CARHR248090 Cardamine hirsuta HOM05D004434 ORTHO05D000365 1.4e-08 63.9 170 37.1
ClCG06G002970 Citrullus lanatus HOM05D004434 ORTHO05D000365 3.1e-08 62.8 153 37.9
Nitab4.5_0000706g0090 Nicotiana tabacum HOM05D004434 ORTHO05D000365 3.1e-08 62.8 116 44.0
HanXRQChr03g0093291 Helianthus annuus HOM05D004434 ORTHO05D000365 1.2e-07 60.8 158 34.2
Peaxi162Scf00377g00029 Petunia axillaris HOM05D004434 ORTHO05D000365 1.2e-07 60.8 132 37.9
CsaV3_6G009090 Cucumis sativus L. HOM05D004434 ORTHO05D000365 2.0e-07 60.1 165 35.8
Actinidia33486 Actinidia chinensis HOM05D004434 ORTHO05D000365 3.4e-07 59.3 152 34.9
HanXRQChr13g0422911 Helianthus annuus HOM05D004434 ORTHO05D000365 3.4e-07 59.3 172 34.9
MELO3C022233.2 Cucumis melo HOM05D004434 ORTHO05D000365 7.5e-07 58.2 165 34.5
Peaxi162Scf00350g00610 Petunia axillaris HOM05D004434 ORTHO05D000365 7.5e-07 58.2 143 35.7
Sed0003684 Sechium edule HOM05D004434 ORTHO05D000365 1.7e-06 57.0 72 51.4
SGA_v2.0_scaffold11G05524 Striga asiatica HOM05D004434 ORTHO05D000365 1.7e-06 57.0 119 37.8
Nitab4.5_0000475g0100 Nicotiana tabacum HOM05D004434 ORTHO05D000365 3.7e-06 55.8 127 33.9


User provided reference genes

Program Settings