Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.09G128000 Manihot esculenta HOM05D008311 ORTHO05D010526 1.3e-241 839.3 446 100.0
GSVIVG01024350001 Vitis vinifera HOM05D008311 ORTHO05D010526 7.8e-157 557.8 446 67.0
Cfa016060 Carpinus fangiana HOM05D008311 ORTHO05D010526 2.6e-152 542.7 447 66.0
Thecc.05G218800 Theobroma cacao HOM05D008311 ORTHO05D010526 2.2e-151 539.7 448 65.8
TAR629G0038 Trochodendron aralioides HOM05D008311 ORTHO05D010526 6.4e-151 538.1 459 63.0
Nn3g20131 Nelumbo nucifera HOM05D008311 ORTHO05D010526 1.5e-147 526.9 454 61.5
Aqoxy4G02584 Aquilegia oxysepala HOM05D008311 ORTHO05D010526 7.3e-147 524.6 446 62.6
Haze_00388 Corylus avellana HOM05D008311 ORTHO05D010526 2.9e-143 512.7 410 66.6
Actinidia08755 Actinidia chinensis HOM05D008311 ORTHO05D010526 1.2e-141 507.3 430 62.6
Gohir.A08G221662 Gossypium hirsutum HOM05D008311 ORTHO05D010526 5.1e-140 501.9 446 62.8
MBI04_g20345_MAGBIO Magnolia biondii HOM05D008311 ORTHO05D010526 1.4e-137 493.8 411 63.0
Dinv29140 Davidia involucrata HOM05D008311 ORTHO05D010526 2.3e-137 493.0 431 64.3
QL09p022981 Quercus lobata HOM05D008311 ORTHO05D010526 6.8e-137 491.5 530 54.5
Gorai.004G256700 Gossypium raimondii HOM05D008311 ORTHO05D010526 1.7e-135 486.9 447 61.5
Ciclev10020460m.g Citrus clementina HOM05D008311 ORTHO05D010526 6.4e-135 485.0 388 65.2
Gohir.D08G241300 Gossypium hirsutum HOM05D008311 ORTHO05D010526 9.2e-134 481.1 447 61.1
MD07G1310100 Malus domestica HOM05D008311 ORTHO05D010526 6.0e-133 478.4 440 60.7
Duzib128G1797 Durio zibethinus HOM05D008311 ORTHO05D010526 4.7e-130 468.8 401 64.1
Sed0001927 Sechium edule HOM05D008311 ORTHO05D010526 6.2e-130 468.4 389 62.7
CDE11G1038 Ceratophyllum demersum HOM05D008311 ORTHO05D010526 4.4e-128 462.2 424 57.1
Prupe.2G328000 Prunus persica HOM05D008311 ORTHO05D010526 9.2e-126 454.5 378 64.3
Eucgr.A02984 Eucalyptus grandis HOM05D008311 ORTHO05D010526 4.6e-125 452.2 393 61.3
FAN10G1178 Fragaria x ananassa HOM05D008311 ORTHO05D010526 1.0e-124 451.1 385 61.0
Atru.chr12.1923 Acer truncatum HOM05D008311 ORTHO05D010526 5.6e-123 445.3 445 56.6
AUR62028199 Chenopodium quinoa HOM05D008311 ORTHO05D010526 5.6e-123 445.3 396 59.8
CsaV3_2G036620 Cucumis sativus L. HOM05D008311 ORTHO05D010526 1.3e-122 444.1 389 60.7
CiPaw.05G215000 Carya illinoinensis HOM05D008311 ORTHO05D010526 2.8e-122 443.0 379 63.6
vmacro06529 Vaccinium macrocarpon HOM05D008311 ORTHO05D010526 1.3e-119 434.1 436 55.3
COL.COLO4_15199 Corchorus olitorius HOM05D008311 ORTHO05D010526 6.0e-117 425.2 395 59.7
ClCG09G017160 Citrullus lanatus HOM05D008311 ORTHO05D010526 1.7e-116 423.7 391 58.6
CDE11G1017 Ceratophyllum demersum HOM05D008311 ORTHO05D010526 8.7e-116 421.4 413 54.0
ATR0665G332 Amborella trichopoda HOM05D008311 ORTHO05D010526 1.3e-114 417.5 430 55.6
AUR62002082 Chenopodium quinoa HOM05D008311 ORTHO05D010526 3.6e-114 416.0 365 60.8
Lsat_1_v5_gn_8_108920 Lactuca sativa HOM05D008311 ORTHO05D010526 6.2e-114 415.2 394 57.4
Zm00001eb429910 Zea mays HOM05D008311 ORTHO05D010526 2.8e-106 389.8 398 53.0
HPP92_005385 Vanilla planifolia HOM05D008311 ORTHO05D010526 1.4e-105 387.5 398 53.0
DCAR_020420 Daucus carota HOM05D008311 ORTHO05D010526 2.2e-103 380.2 392 54.3
HPP92_009011 Vanilla planifolia HOM05D008311 ORTHO05D010526 1.9e-102 377.1 452 49.8
THA.LOC104821739 Tarenaya hassleriana HOM05D008311 ORTHO05D010526 4.2e-102 375.9 357 57.4
FAN03G2372 Fragaria x ananassa HOM05D008311 ORTHO05D010526 1.1e-97 361.3 402 50.7
RcHm_v2.0_Chr1g0384481 Rosa chinensis HOM05D008311 ORTHO05D010526 1.8e-97 360.5 312 62.5
Lj3A885T48 Lonicera japonica HOM05D008311 ORTHO05D010526 2.2e-95 353.6 415 50.6
EL10Ac3g05056 Beta vulgaris HOM05D008311 ORTHO05D010526 2.9e-95 353.2 389 49.1
MELO3C021863.2 Cucumis melo HOM05D008311 ORTHO05D010526 2.0e-88 330.5 292 59.6
Os04g0592500 Oryza sativa ssp. japonica HOM05D008311 ORTHO05D010526 2.1e-85 320.5 395 46.1
Pp3c16_5410 Physcomitrium patens HOM05D008311 ORTHO05D010526 9.1e-73 278.5 437 38.7
Zm00001eb201380 Zea mays HOM05D008311 ORTHO05D010526 5.5e-70 269.2 311 47.6
AagrBONN_evm.TU.Sc2ySwM_117.4008 Anthoceros agrestis HOM05D008311 ORTHO05D010526 1.4e-68 264.6 361 43.8
SEGI_24543 Sequoiadendron giganteum HOM05D008311 ORTHO05D010526 1.8e-57 227.6 261 48.7
Zm00001eb341760 Zea mays HOM05D008311 ORTHO05D010526 2.0e-56 224.2 262 45.8
Zm00001eb072300 Zea mays HOM05D008311 ORTHO05D010526 5.4e-33 146.4 195 48.7
SEGI_38800 Sequoiadendron giganteum HOM05D008311 ORTHO05D010526 4.3e-30 136.7 127 54.3
SEGI_12661 Sequoiadendron giganteum HOM05D008311 ORTHO05D010526 1.1e-28 132.1 237 38.0
CSS0045669 Camellia sinensis var. sinensis HOM05D008311 ORTHO05D010526 3.4e-27 127.1 100 64.0
SEGI_19325 Sequoiadendron giganteum HOM05D008311 ORTHO05D010526 1.4e-17 95.1 133 45.1
Zm00001eb106730 Zea mays HOM05D006823 ORTHO05D008608 6.0e-16 89.7 68 64.7
Potri.013G079301 Populus trichocarpa HOM05D008311 ORTHO05D010526 3.1e-12 77.4 62 67.7
Dinv07670 Davidia involucrata HOM05D008311 ORTHO05D183374 1.5e-11 75.1 51 74.5
Zm00001eb207330 Zea mays HOM05D008311 ORTHO05D010526 6.0e-08 63.2 149 36.2


User provided reference genes

Program Settings