Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.09G127100 Manihot esculenta HOM05D006678 ORTHO05D008388 8.8e-75 283.5 139 100.0
Thecc.05G213400 Theobroma cacao HOM05D006678 ORTHO05D008388 3.2e-48 195.3 101 90.1
Duzib177G0619 Durio zibethinus HOM05D006678 ORTHO05D008388 2.7e-47 192.2 101 88.1
Gohir.D13G161000 Gossypium hirsutum HOM05D006678 ORTHO05D008388 7.8e-47 190.7 101 88.1
Gorai.013G181600 Gossypium raimondii HOM05D006678 ORTHO05D008388 7.8e-47 190.7 101 88.1
Duzib106G0454 Durio zibethinus HOM05D006678 ORTHO05D008388 1.0e-46 190.3 101 88.1
Gohir.A13G156100 Gossypium hirsutum HOM05D006678 ORTHO05D008388 1.3e-46 189.9 101 88.1
MD01G1236000 Malus domestica HOM05D006678 ORTHO05D008388 1.7e-46 189.5 104 87.5
VMungo1127G1968 Vigna mungo HOM05D006678 ORTHO05D008388 2.3e-46 189.1 104 88.5
COL.COLO4_11805 Corchorus olitorius HOM05D006678 ORTHO05D008388 3.9e-46 188.3 101 87.1
Prupe.2G326100 Prunus persica HOM05D006678 ORTHO05D008388 3.9e-46 188.3 103 87.4
Potri.013G082100 Populus trichocarpa HOM05D006678 ORTHO05D008388 5.0e-46 188.0 110 85.5
Atru.chr12.1964 Acer truncatum HOM05D006678 ORTHO05D008388 1.5e-45 186.4 104 86.5
Ciclev10023015m.g Citrus clementina HOM05D006678 ORTHO05D008388 1.5e-45 186.4 103 83.5
Phvul.011G020300 Phaseolus vulgaris HOM05D006678 ORTHO05D008388 3.3e-45 185.3 104 85.6
TWI38G1314 Tripterygium wilfordii HOM05D006678 ORTHO05D008388 4.3e-45 184.9 104 84.6
TWI39G0757 Tripterygium wilfordii HOM05D006678 ORTHO05D008388 2.8e-44 182.2 104 84.6
THA.LOC104802920 Tarenaya hassleriana HOM05D006678 ORTHO05D008388 3.6e-44 181.8 103 84.5
FvH4_7g33980 Fragaria vesca HOM05D006678 ORTHO05D008388 4.7e-44 181.4 104 83.7
FAN03G1679 Fragaria x ananassa HOM05D006678 ORTHO05D008388 4.7e-44 181.4 104 83.7
Medtr4g077807 Medicago truncatula HOM05D006678 ORTHO05D008388 4.7e-44 181.4 106 82.1
QL09p024031 Quercus lobata HOM05D006678 ORTHO05D008388 6.2e-44 181.0 102 81.4
FAN10G1380 Fragaria x ananassa HOM05D006678 ORTHO05D008388 8.0e-44 180.6 104 82.7
THA.LOC104827215 Tarenaya hassleriana HOM05D006678 ORTHO05D008388 1.0e-43 180.3 103 83.5
CiPaw.06G032600 Carya illinoinensis HOM05D006678 ORTHO05D008388 1.4e-43 179.9 103 80.6
Glyma.12G017800 Glycine max HOM05D006678 ORTHO05D008388 1.4e-43 179.9 104 83.7
GSVIVG01024408001 Vitis vinifera HOM05D006678 ORTHO05D008388 1.4e-43 179.9 103 82.5
Ca_04918_v3 Cicer arietinum L. HOM05D006678 ORTHO05D008388 3.1e-43 178.7 106 80.2
RcHm_v2.0_Chr1g0384211 Rosa chinensis HOM05D006678 ORTHO05D008388 5.2e-43 177.9 105 81.9
Nn1g01909 Nelumbo nucifera HOM05D006678 ORTHO05D008388 8.9e-43 177.2 105 82.9
Psat7g171800 Pisum sativum HOM05D006678 ORTHO05D008388 8.9e-43 177.2 106 79.2
Sabra13G0070800 Salix brachista HOM05D006678 ORTHO05D008388 8.9e-43 177.2 113 79.6
CANSAT21G1467 Cannabis sativa HOM05D006678 ORTHO05D008388 1.2e-42 176.8 103 80.6
TAR629G1392 Trochodendron aralioides HOM05D006678 ORTHO05D008388 1.2e-42 176.8 104 79.8
FAN01G1466 Fragaria x ananassa HOM05D006678 ORTHO05D008388 1.5e-42 176.4 104 81.7
Glyma.11G091800 Glycine max HOM05D006678 ORTHO05D008388 1.5e-42 176.4 106 81.1
MELO3C024729.2 Cucumis melo HOM05D006678 ORTHO05D008388 2.0e-42 176.0 104 80.8
TPR.G27187 Trifolium pratense HOM05D006678 ORTHO05D008388 4.4e-42 174.9 106 78.3
arahy.Tifrunner.gnm1.ann1.Z69A25 Arachis hypogaea HOM05D006678 ORTHO05D008388 1.3e-41 173.3 106 79.2
ClCG02G007680 Citrullus lanatus HOM05D006678 ORTHO05D008388 1.3e-41 173.3 104 78.8
Lj3g0002487 Lotus japonicus HOM05D006678 ORTHO05D008388 1.3e-41 173.3 112 75.9
Aa31LG5G13550 Aethionema arabicum HOM05D006678 ORTHO05D008388 2.9e-41 172.2 111 74.8
AT3G03070 Arabidopsis thaliana HOM05D006678 ORTHO05D008388 2.9e-41 172.2 111 74.8
Thhalv10021803m.g Eutrema salsugineum HOM05D006678 ORTHO05D008388 2.9e-41 172.2 111 74.8
Actinidia18705 Actinidia chinensis HOM05D006678 ORTHO05D008388 4.9e-41 171.4 104 78.8
CsaV3_2G036030 Cucumis sativus L. HOM05D006678 ORTHO05D008388 4.9e-41 171.4 104 78.8
Lalb_Chr01g0000921 Lupinus albus HOM05D006678 ORTHO05D008388 4.9e-41 171.4 103 78.6
CARHR077080 Cardamine hirsuta HOM05D006678 ORTHO05D008388 6.4e-41 171.0 111 73.9
PGR042G1336 Punica granatum HOM05D006678 ORTHO05D008388 6.4e-41 171.0 112 77.7
AL3G12580 Arabidopsis lyrata HOM05D006678 ORTHO05D008388 1.1e-40 170.2 111 73.9
Carub.0003s0222 Capsella rubella HOM05D006678 ORTHO05D008388 1.1e-40 170.2 111 73.9
Lalb_Chr03g0024411 Lupinus albus HOM05D006678 ORTHO05D008388 1.1e-40 170.2 105 76.2
PSO063G3868 Papaver somniferum HOM05D006678 ORTHO05D008388 1.4e-40 169.9 105 77.1
Gorai.013G182200 Gossypium raimondii HOM05D006678 ORTHO05D008388 2.4e-40 169.1 101 80.2
PSO782G5154 Papaver somniferum HOM05D006678 ORTHO05D008388 3.2e-40 168.7 111 73.0
Sp3g02110 Schrenkiella parvula HOM05D006678 ORTHO05D008388 5.4e-40 167.9 112 75.0
Sed0006085 Sechium edule HOM05D006678 ORTHO05D008388 7.0e-40 167.5 105 77.1
Nitab4.5_0000021g0500 Nicotiana tabacum HOM05D006678 ORTHO05D008388 9.2e-40 167.2 111 73.0
Peaxi162Scf00133g00723 Petunia axillaris HOM05D006678 ORTHO05D008388 1.6e-39 166.4 108 75.9
Dinv17257 Davidia involucrata HOM05D006678 ORTHO05D008388 2.0e-39 166.0 106 76.4
Nitab4.5_0011186g0030 Nicotiana tabacum HOM05D006678 ORTHO05D008388 2.0e-39 166.0 111 73.9
Aqoxy3G02158 Aquilegia oxysepala HOM05D006678 ORTHO05D008388 2.7e-39 165.6 90 86.7
BolC5t35043H Brassica oleracea HOM05D006678 ORTHO05D008388 6.0e-39 164.5 113 71.7
Hund09791 Selenicereus undatus HOM05D006678 ORTHO05D008388 1.0e-38 163.7 104 74.0
BcaB04g21385 Brassica carinata HOM05D006678 ORTHO05D008388 1.7e-38 162.9 112 71.4
C05p63740 Brassica napus HOM05D006678 ORTHO05D008388 1.7e-38 162.9 113 71.7
A05p44110 Brassica napus HOM05D006678 ORTHO05D008388 2.3e-38 162.5 113 70.8
BraSC90t46700Z Brassica rapa HOM05D006678 ORTHO05D008388 2.3e-38 162.5 113 70.8
Actinidia34306 Actinidia chinensis HOM05D006678 ORTHO05D008388 5.0e-38 161.4 106 74.5
Dinv29159 Davidia involucrata HOM05D006678 ORTHO05D008388 5.0e-38 161.4 106 73.6
SGA_v2.0_scaffold50G18440 Striga asiatica HOM05D006678 ORTHO05D008388 6.6e-38 161.0 106 73.6
BNapus_Darmor_BZH_scaffold_129p00040 Brassica napus HOM05D006678 ORTHO05D008388 8.6e-38 160.6 112 71.4
Lsat_1_v5_gn_9_47480 Lactuca sativa HOM05D006678 ORTHO05D008388 8.6e-38 160.6 138 62.3
HanXRQChr03g0088421 Helianthus annuus HOM05D006678 ORTHO05D008388 1.1e-37 160.2 106 77.4
DCAR_009010 Daucus carota HOM05D006678 ORTHO05D008388 1.5e-37 159.8 118 69.5
BolC1t05850H Brassica oleracea HOM05D006678 ORTHO05D008388 2.5e-37 159.1 112 70.5
ATR0829G044 Amborella trichopoda HOM05D006678 ORTHO05D008388 3.3e-37 158.7 91 82.4
MSTRG.26930 Avicennia marina HOM05D006678 ORTHO05D008388 5.6e-37 157.9 105 73.3
Rhsim03G0221400 Rhododendron simsii HOM05D006678 ORTHO05D008388 5.6e-37 157.9 107 72.0
BraA01t04595Z Brassica rapa HOM05D006678 ORTHO05D008388 1.2e-36 156.8 112 69.6
Migut.F00948 Erythranthe guttata HOM05D006678 ORTHO05D008388 1.2e-36 156.8 106 71.7
Oeu031704.1 Olea europaea HOM05D006678 ORTHO05D008388 1.2e-36 156.8 107 72.9
unitig_90.g27534 Utricularia gibba HOM05D006678 ORTHO05D008388 2.1e-36 156.0 105 72.4
CDE03G0140 Ceratophyllum demersum HOM05D006678 ORTHO05D008388 2.8e-36 155.6 99 76.8
Solyc03g097010.3 Solanum lycopersicum HOM05D006678 ORTHO05D008388 2.8e-36 155.6 111 70.3
Sopen03g027760 Solanum pennellii HOM05D006678 ORTHO05D008388 3.6e-36 155.2 111 70.3
CDE06G2089 Ceratophyllum demersum HOM05D006678 ORTHO05D008388 6.2e-36 154.5 91 80.2
Hma1.2p1_1680F.1_g297200 Hydrangea macrophylla HOM05D006678 ORTHO05D008388 8.1e-36 154.1 112 67.0
vmacro06510 Vaccinium macrocarpon HOM05D006678 ORTHO05D008388 1.1e-35 153.7 115 67.0
CSS0031072 Camellia sinensis var. sinensis HOM05D006678 ORTHO05D008388 2.3e-35 152.5 115 67.8
EL10Ac3g05077 Beta vulgaris HOM05D006678 ORTHO05D008388 5.2e-35 151.4 104 69.2
CSS0016806 Camellia sinensis var. sinensis HOM05D006678 ORTHO05D008388 8.9e-35 150.6 121 64.5
Cc02_g00280 Coffea canephora HOM05D006678 ORTHO05D008388 3.4e-34 148.7 107 71.0
AUR62028176 Chenopodium quinoa HOM05D006678 ORTHO05D008388 9.8e-34 147.1 103 68.0
SalBow2G2234 Salvia bowleyana HOM05D006678 ORTHO05D008388 1.3e-33 146.7 105 67.6
AUR62002062 Chenopodium quinoa HOM05D006678 ORTHO05D008388 3.7e-33 145.2 103 68.0
Haze_00425 Corylus avellana HOM05D006877 ORTHO05D008735 3.2e-32 142.1 66 93.9
Zm00001eb172200 Zea mays HOM05D006678 ORTHO05D008388 6.0e-31 137.9 101 66.3
CAN.G1131.11 Capsicum annuum HOM05D006678 ORTHO05D008388 7.8e-31 137.5 66 89.4
Os08g0161700 Oryza sativa ssp. japonica HOM05D006678 ORTHO05D008388 1.1e-29 133.7 93 66.7
vmacro22173 Vaccinium macrocarpon HOM05D006678 ORTHO05D008388 1.5e-29 133.3 64 90.6
Oeu063732.2 Olea europaea HOM05D006678 ORTHO05D008388 4.3e-29 131.7 62 91.9
Nitab4.5_0000011g0100 Nicotiana tabacum HOM05D006678 ORTHO05D008388 7.3e-29 131.0 65 90.8
Duzib128G0155 Durio zibethinus HOM05D006678 ORTHO05D008388 3.6e-28 128.6 76 77.6
AagrBONN_evm.TU.Sc2ySwM_368.1248 Anthoceros agrestis HOM05D006678 ORTHO05D008388 3.1e-27 125.6 76 69.7
ECA232G0519 Erigeron canadensis HOM05D006678 ORTHO05D008388 4.0e-27 125.2 94 68.1
SMO239G0055 Selaginella moellendorffii HOM05D006678 ORTHO05D008388 1.5e-26 123.2 72 72.2
Pp3c24_2620 Physcomitrium patens HOM05D006678 ORTHO05D008388 2.0e-26 122.9 99 62.6
SEGI_28569 Sequoiadendron giganteum HOM05D006678 ORTHO05D008388 2.0e-26 122.9 62 88.7
Mapoly0006s0269 Marchantia polymorpha HOM05D006678 ORTHO05D008388 9.9e-26 120.6 73 71.2
Ah.13g072760 Amaranthus hybridus HOM05D006678 ORTHO05D008388 3.2e-24 115.5 65 83.1
Gohir.D13G160300 Gossypium hirsutum HOM05D006678 ORTHO05D008388 7.8e-23 110.9 64 84.4
Pp3c23_13320 Physcomitrium patens HOM05D006678 ORTHO05D008388 1.0e-22 110.5 73 69.9
arahy.Tifrunner.gnm1.ann1.GV73NI Arachis hypogaea HOM05D006678 ORTHO05D008388 1.2e-18 97.1 69 75.4
Sc06g0002530 Simmondsia chinensis HOM05D002239 ORTHO05D002408 4.9e-17 91.7 68 66.2
PRCOL_00006130 Prasinoderma coloniale HOM05D006678 ORTHO05D008388 1.9e-16 89.7 106 50.0
Cre03.g178250 Chlamydomonas reinhardtii HOM05D006678 ORTHO05D008388 2.1e-15 86.3 74 58.1
Zm00001eb415610 Zea mays HOM05D006678 ORTHO05D008388 4.8e-12 75.1 65 58.5
CBR_g6679 Chara braunii HOM05D006678 ORTHO05D008388 3.8e-09 65.5 35 77.1
COL.COLO4_05232 Corchorus olitorius HOM05D006678 ORTHO05D008388 3.0e-06 55.8 37 75.7


User provided reference genes

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