Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.09G121600 Manihot esculenta HOM05D007303 ORTHO05D009231 4.0e-33 144.1 67 100.0
COL.COLO4_05680 Corchorus olitorius HOM05D007303 ORTHO05D009231 4.6e-29 130.6 67 88.1
Duzib151G0876 Durio zibethinus HOM05D007303 ORTHO05D009231 4.6e-29 130.6 67 88.1
Cpa.g.sc0.70 Carica papaya HOM05D007303 ORTHO05D009231 7.8e-29 129.8 64 89.1
MELO3C025258.2 Cucumis melo HOM05D007303 ORTHO05D009231 1.7e-28 128.6 62 95.2
CsaV3_4G027390 Cucumis sativus L. HOM05D007303 ORTHO05D009231 1.7e-28 128.6 62 95.2
ClCG04G006170 Citrullus lanatus HOM05D007303 ORTHO05D009231 2.3e-28 128.3 64 90.6
Thecc.04G147800 Theobroma cacao HOM05D007303 ORTHO05D009231 3.0e-28 127.9 67 86.6
Sed0004919 Sechium edule HOM05D007303 ORTHO05D009231 5.1e-28 127.1 67 85.1
Cfa017000 Carpinus fangiana HOM05D007303 ORTHO05D009231 1.1e-27 125.9 62 90.3
CiPaw.10G166700 Carya illinoinensis HOM05D007303 ORTHO05D009231 1.1e-27 125.9 67 83.6
Prupe.6G297800 Prunus persica HOM05D007303 ORTHO05D009231 1.9e-27 125.2 67 85.1
Haze_21228 Corylus avellana HOM05D007303 ORTHO05D009231 2.5e-27 124.8 62 90.3
GSVIVG01010904001 Vitis vinifera HOM05D007303 ORTHO05D009231 2.5e-27 124.8 67 83.6
Gohir.A10G152200 Gossypium hirsutum HOM05D007303 ORTHO05D009231 4.3e-27 124.0 62 88.7
Gohir.A10G152700 Gossypium hirsutum HOM05D007303 ORTHO05D009231 4.3e-27 124.0 62 88.7
Gohir.D10G113500 Gossypium hirsutum HOM05D007303 ORTHO05D009231 4.3e-27 124.0 62 88.7
Gohir.D10G114000 Gossypium hirsutum HOM05D007303 ORTHO05D009231 4.3e-27 124.0 62 88.7
Gorai.011G125300 Gossypium raimondii HOM05D007303 ORTHO05D009231 4.3e-27 124.0 62 88.7
Gorai.011G125800 Gossypium raimondii HOM05D007303 ORTHO05D009231 4.3e-27 124.0 62 88.7
RcHm_v2.0_Chr3g0459881 Rosa chinensis HOM05D007303 ORTHO05D009231 4.3e-27 124.0 64 87.5
TWI53G0471 Tripterygium wilfordii HOM05D007303 ORTHO05D009231 4.3e-27 124.0 64 87.5
Migut.L02050 Erythranthe guttata HOM05D007303 ORTHO05D009231 1.3e-26 122.5 66 81.8
FAN05G5278 Fragaria x ananassa HOM05D007303 ORTHO05D009231 1.6e-26 122.1 64 85.9
FAN09G2915 Fragaria x ananassa HOM05D007303 ORTHO05D009231 1.6e-26 122.1 64 85.9
FvH4_6g09420 Fragaria vesca HOM05D007303 ORTHO05D009231 3.6e-26 120.9 64 84.4
FAN14G3833 Fragaria x ananassa HOM05D007303 ORTHO05D009231 3.6e-26 120.9 64 84.4
CANSAT83G0001 Cannabis sativa HOM05D007303 ORTHO05D009231 4.8e-26 120.6 62 90.3
Hma1.2p1_0174F.1_g076630 Hydrangea macrophylla HOM05D007303 ORTHO05D009231 4.8e-26 120.6 66 86.4
Duzib212G0558 Durio zibethinus HOM05D007303 ORTHO05D009231 6.2e-26 120.2 67 83.6
Aa31LG5G11350 Aethionema arabicum HOM05D007303 ORTHO05D009231 1.1e-25 119.4 64 79.7
Eucgr.K01299 Eucalyptus grandis HOM05D007303 ORTHO05D009231 1.4e-25 119.0 62 85.5
Oeu007820.2 Olea europaea HOM05D007303 ORTHO05D009231 1.4e-25 119.0 65 81.5
TWI74G1491 Tripterygium wilfordii HOM05D007303 ORTHO05D009231 1.4e-25 119.0 64 85.9
MD12G1193500 Malus domestica HOM05D007303 ORTHO05D009231 1.8e-25 118.6 67 83.6
Oeu026929.1 Olea europaea HOM05D007303 ORTHO05D009231 2.4e-25 118.2 64 82.8
Sopen10g027350 Solanum pennellii HOM05D007303 ORTHO05D009231 3.1e-25 117.9 64 82.8
PGSC0003DMG400027701 Solanum tuberosum HOM05D007303 ORTHO05D009231 3.1e-25 117.9 64 82.8
TAR633G2342 Trochodendron aralioides HOM05D007303 ORTHO05D009231 3.1e-25 117.9 60 90.0
CAN.G65.102 Capsicum annuum HOM05D007303 ORTHO05D009231 4.0e-25 117.5 64 79.7
Ca_23107_v3 Cicer arietinum L. HOM05D007303 ORTHO05D009231 4.0e-25 117.5 64 84.4
MD04G1177900 Malus domestica HOM05D007303 ORTHO05D009231 4.0e-25 117.5 62 87.1
Nitab4.5_0001215g0100 Nicotiana tabacum HOM05D007303 ORTHO05D009231 4.0e-25 117.5 64 82.8
Glyma.18G217700 Glycine max HOM05D007303 ORTHO05D009231 5.3e-25 117.1 61 86.9
Cc06_g00200 Coffea canephora HOM05D007303 ORTHO05D009231 6.9e-25 116.7 68 82.4
PGR031G1377 Punica granatum HOM05D007303 ORTHO05D009231 9.0e-25 116.3 64 82.8
Hund19736 Selenicereus undatus HOM05D007303 ORTHO05D009231 9.0e-25 116.3 68 80.9
C05p59250 Brassica napus HOM05D007303 ORTHO05D009231 1.2e-24 115.9 64 81.2
BolC5t34572H Brassica oleracea HOM05D007303 ORTHO05D009231 1.2e-24 115.9 64 81.2
Medtr8g005360 Medicago truncatula HOM05D007303 ORTHO05D009231 1.5e-24 115.5 62 85.5
Glyma.09G271600 Glycine max HOM05D007303 ORTHO05D009231 2.0e-24 115.2 61 85.2
BcaB04g18583 Brassica carinata HOM05D007303 ORTHO05D009231 2.6e-24 114.8 64 79.7
BcaC05g29598 Brassica carinata HOM05D007303 ORTHO05D009231 2.6e-24 114.8 64 79.7
A05p40170 Brassica napus HOM05D007303 ORTHO05D009231 2.6e-24 114.8 64 79.7
Thhalv10021979m.g Eutrema salsugineum HOM05D007303 ORTHO05D009231 2.6e-24 114.8 64 79.7
Phvul.008G079100 Phaseolus vulgaris HOM05D007303 ORTHO05D009231 2.6e-24 114.8 62 83.9
Sc20g0007240 Simmondsia chinensis HOM05D007303 ORTHO05D009231 2.6e-24 114.8 62 82.3
BcaC09g47979 Brassica carinata HOM05D007303 ORTHO05D009231 5.8e-24 113.6 64 78.1
BolC1t05499H Brassica oleracea HOM05D007303 ORTHO05D009231 5.8e-24 113.6 64 78.1
BraA01t04340Z Brassica rapa HOM05D007303 ORTHO05D009231 5.8e-24 113.6 64 78.1
Lj3g0023771 Lotus japonicus HOM05D007303 ORTHO05D009231 5.8e-24 113.6 66 78.8
SalBow4G1964 Salvia bowleyana HOM05D007303 ORTHO05D009231 5.8e-24 113.6 66 80.3
SalBow4G2888 Salvia bowleyana HOM05D007303 ORTHO05D009231 5.8e-24 113.6 66 80.3
BraA03t12812Z Brassica rapa HOM05D007303 ORTHO05D009231 7.6e-24 113.2 64 78.1
Psat6g005160 Pisum sativum HOM05D007303 ORTHO05D009231 7.6e-24 113.2 61 85.2
AT3G08610 Arabidopsis thaliana HOM05D007303 ORTHO05D009231 9.9e-24 112.8 64 78.1
BcaC01g04187 Brassica carinata HOM05D007303 ORTHO05D009231 9.9e-24 112.8 63 79.4
BolC3t16676H Brassica oleracea HOM05D007303 ORTHO05D009231 9.9e-24 112.8 63 79.4
Oeu035181.1 Olea europaea HOM05D007303 ORTHO05D009231 9.9e-24 112.8 67 79.1
AL3G19590 Arabidopsis lyrata HOM05D007303 ORTHO05D009231 1.3e-23 112.5 64 78.1
Aa31LG5G18650 Aethionema arabicum HOM05D007303 ORTHO05D009231 1.7e-23 112.1 64 75.0
THA.LOC104820511 Tarenaya hassleriana HOM05D007303 ORTHO05D009231 2.2e-23 111.7 61 80.3
CARHR082910 Cardamine hirsuta HOM05D007303 ORTHO05D009231 2.9e-23 111.3 64 76.6
Ah.15g089810 Amaranthus hybridus HOM05D007303 ORTHO05D009231 3.8e-23 110.9 66 77.3
AUR62006451 Chenopodium quinoa HOM05D007303 ORTHO05D009231 3.8e-23 110.9 58 82.8
DCAR_023961 Daucus carota HOM05D007303 ORTHO05D009231 6.4e-23 110.2 55 89.1
PSO384G4262 Papaver somniferum HOM05D007303 ORTHO05D009231 1.4e-22 109.0 58 84.5
arahy.Tifrunner.gnm1.ann1.RL3GXR Arachis hypogaea HOM05D007303 ORTHO05D009231 1.9e-22 108.6 64 78.1
arahy.Tifrunner.gnm1.ann1.ZQ7RI8 Arachis hypogaea HOM05D007303 ORTHO05D009231 1.9e-22 108.6 64 78.1
BcaB04g21249 Brassica carinata HOM05D007303 ORTHO05D009231 1.9e-22 108.6 58 82.8
Carub.0003s0774 Capsella rubella HOM05D007303 ORTHO05D009231 1.9e-22 108.6 64 73.4
Lsat_1_v5_gn_8_109701 Lactuca sativa HOM05D007303 ORTHO05D009231 2.4e-22 108.2 63 74.6
THA.LOC104816152 Tarenaya hassleriana HOM05D007303 ORTHO05D009231 4.2e-22 107.5 61 77.0
Potri.016G140900 Populus trichocarpa HOM05D007303 ORTHO05D009231 9.3e-22 106.3 62 74.2
Os05g0481600 Oryza sativa ssp. japonica HOM05D007303 ORTHO05D009231 3.5e-21 104.4 58 79.3
Sp3g07060 Schrenkiella parvula HOM05D007303 ORTHO05D009231 3.5e-21 104.4 55 83.6
ECA236G3381 Erigeron canadensis HOM05D007303 ORTHO05D009231 7.9e-21 103.2 60 76.7
QL07p031324 Quercus lobata HOM05D007303 ORTHO05D009231 1.5e-19 99.0 66 62.1
Oeu028466.1 Olea europaea HOM05D007303 ORTHO05D009231 5.6e-19 97.1 66 68.2
CiPaw.01G273900 Carya illinoinensis HOM05D007303 ORTHO05D009231 3.6e-18 94.4 60 71.7
SEGI_21984 Sequoiadendron giganteum HOM05D007303 ORTHO05D009231 1.1e-17 92.8 62 66.1
Cc09_g07100 Coffea canephora HOM05D007303 ORTHO05D009231 1.5e-16 89.0 67 65.7
Manes.08G168000 Manihot esculenta HOM05D007303 ORTHO05D009231 2.0e-16 88.6 48 83.3
Cc00_g04100 Coffea canephora HOM05D007303 ORTHO05D009231 4.5e-16 87.4 68 66.2
Sabra04G0157400 Salix brachista HOM05D007303 ORTHO05D009231 1.1e-14 82.8 47 76.6
MBI15_g31036_MAGBIO Magnolia biondii HOM05D007303 ORTHO05D009231 1.1e-11 72.8 39 82.1
Mapoly0148s0030 Marchantia polymorpha HOM05D007303 ORTHO05D009231 2.1e-10 68.6 57 54.4
CSS0019093 Camellia sinensis var. sinensis HOM05D007303 ORTHO05D009231 2.8e-10 68.2 36 83.3
CSS0017493 Camellia sinensis var. sinensis HOM05D007303 ORTHO05D009231 3.7e-10 67.8 36 83.3
CSS0048723 Camellia sinensis var. sinensis HOM05D007303 ORTHO05D009231 3.7e-10 67.8 36 83.3
A03p36440 Brassica napus HOM05D007303 ORTHO05D009231 6.2e-10 67.0 36 80.6
Pp3c10_5690 Physcomitrium patens HOM05D007303 ORTHO05D009231 8.2e-10 66.6 58 51.7
Pp3c10_5720 Physcomitrium patens HOM05D007303 ORTHO05D009231 8.2e-10 66.6 58 51.7
Zm00001eb290920 Zea mays HOM05D007303 ORTHO05D009231 1.4e-09 65.9 36 75.0
Cc07_g13470 Coffea canephora HOM05D007303 ORTHO05D009231 6.9e-09 63.5 46 65.2
CBR_g5630 Chara braunii HOM05D007303 ORTHO05D009231 1.0e-07 59.7 53 49.1


User provided reference genes

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