Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.09G119000 Manihot esculenta HOM05D006889 ORTHO05D008614 8.1e-181 637.1 359 100.0
Atru.chr12.2063 Acer truncatum HOM05D006889 ORTHO05D008614 8.2e-133 477.6 361 78.1
Ciclev10012044m.g Citrus clementina HOM05D006889 ORTHO05D008614 5.0e-130 468.4 354 77.4
Potri.001G412800 Populus trichocarpa HOM05D006889 ORTHO05D008614 8.0e-128 461.1 359 74.9
GSVIVG01024467001 Vitis vinifera HOM05D006889 ORTHO05D008614 4.8e-125 451.8 361 74.8
QL09p026702 Quercus lobata HOM05D006889 ORTHO05D008614 5.3e-124 448.4 360 74.7
Thecc.06G017600 Theobroma cacao HOM05D006889 ORTHO05D008614 5.3e-124 448.4 361 73.1
Gohir.A06G144633 Gossypium hirsutum HOM05D006889 ORTHO05D008614 7.0e-124 448.0 348 74.1
Gorai.010G175600 Gossypium raimondii HOM05D006889 ORTHO05D008614 7.0e-124 448.0 348 74.4
Dinv25463 Davidia involucrata HOM05D006889 ORTHO05D008614 6.5e-122 441.4 365 70.4
Lalb_Chr13g0293181 Lupinus albus HOM05D006889 ORTHO05D008614 1.5e-118 430.3 360 72.2
Prupe.2G323000 Prunus persica HOM05D006889 ORTHO05D008614 2.0e-118 429.9 363 70.0
TAR369G0178 Trochodendron aralioides HOM05D006889 ORTHO05D008614 6.3e-117 424.9 351 72.4
FAN03G0535 Fragaria x ananassa HOM05D006889 ORTHO05D008614 1.1e-116 424.1 361 68.4
Sabra16G0274900 Salix brachista HOM05D006889 ORTHO05D008614 9.1e-116 421.0 378 67.7
Haze_22241 Corylus avellana HOM05D006889 ORTHO05D008614 1.2e-115 420.6 359 70.8
CSS0010313 Camellia sinensis var. sinensis HOM05D006889 ORTHO05D008614 4.5e-115 418.7 347 68.3
FAN10G1689 Fragaria x ananassa HOM05D006889 ORTHO05D008614 2.9e-114 416.0 361 67.6
RcHm_v2.0_Chr1g0383401 Rosa chinensis HOM05D006889 ORTHO05D008614 6.5e-114 414.8 352 69.6
FvH4_7g33430 Fragaria vesca HOM05D006889 ORTHO05D008614 8.5e-114 414.5 361 68.7
FAN10G2743 Fragaria x ananassa HOM05D006889 ORTHO05D008614 1.1e-113 414.1 361 67.3
TWI60G1635 Tripterygium wilfordii HOM05D006889 ORTHO05D008614 1.9e-113 413.3 362 67.1
THA.LOC104805469 Tarenaya hassleriana HOM05D006889 ORTHO05D008614 9.4e-113 411.0 360 68.3
Eucgr.K00107 Eucalyptus grandis HOM05D006889 ORTHO05D008614 1.0e-111 407.5 361 66.5
Sabra16G0274600 Salix brachista HOM05D006889 ORTHO05D008614 1.8e-111 406.8 405 63.2
Migut.F00816 Erythranthe guttata HOM05D006889 ORTHO05D008614 6.8e-111 404.8 359 66.6
CiPaw.07G182100 Carya illinoinensis HOM05D006889 ORTHO05D008614 5.7e-110 401.7 334 73.4
Actinidia31405 Actinidia chinensis HOM05D006889 ORTHO05D008614 4.8e-109 398.7 296 78.7
Cpa.g.sc140.53 Carica papaya HOM05D006889 ORTHO05D008614 9.1e-108 394.4 363 68.0
Nn6g34807 Nelumbo nucifera HOM05D006889 ORTHO05D008614 2.0e-107 393.3 370 65.9
Solyc04g009830.3 Solanum lycopersicum HOM05D006889 ORTHO05D008614 1.0e-106 391.0 335 69.6
CDE08G0956 Ceratophyllum demersum HOM05D006889 ORTHO05D008614 1.7e-106 390.2 352 67.3
FAN01G0055 Fragaria x ananassa HOM05D006889 ORTHO05D008614 3.3e-105 386.0 340 66.2
CsaV3_5G005080 Cucumis sativus L. HOM05D006889 ORTHO05D008614 4.2e-105 385.6 360 66.1
Aa31LG5G21960 Aethionema arabicum HOM05D006889 ORTHO05D008614 5.5e-105 385.2 369 61.8
Carub.0004s1859 Capsella rubella HOM05D006889 ORTHO05D008614 7.2e-105 384.8 342 64.9
Sed0014561 Sechium edule HOM05D006889 ORTHO05D008614 1.2e-104 384.0 355 65.4
Oeu033252.2 Olea europaea HOM05D006889 ORTHO05D008614 2.8e-104 382.9 396 60.9
AL4G32960 Arabidopsis lyrata HOM05D006889 ORTHO05D008614 6.1e-104 381.7 366 62.3
Aqoxy4G02722 Aquilegia oxysepala HOM05D006889 ORTHO05D008614 1.4e-103 380.6 367 64.0
AT2G36740 Arabidopsis thaliana HOM05D006889 ORTHO05D008614 2.3e-103 379.8 361 61.5
Sopen04g004970 Solanum pennellii HOM05D006889 ORTHO05D008614 5.2e-103 378.6 337 68.0
MBI14_g11688_MAGBIO Magnolia biondii HOM05D006889 ORTHO05D008614 8.9e-103 377.9 360 67.2
A05p09120 Brassica napus HOM05D006889 ORTHO05D008614 1.2e-102 377.5 362 62.4
SalBow3G4178 Salvia bowleyana HOM05D006889 ORTHO05D008614 2.0e-102 376.7 381 63.8
BraA05t19868Z Brassica rapa HOM05D006889 ORTHO05D008614 2.6e-102 376.3 362 62.2
Ca_18207_v3 Cicer arietinum L. HOM05D006889 ORTHO05D008614 3.4e-102 375.9 355 65.1
Cc02_g09110 Coffea canephora HOM05D006889 ORTHO05D008614 4.4e-102 375.6 354 64.1
BolC4t22783H Brassica oleracea HOM05D006889 ORTHO05D008614 2.8e-101 372.9 360 62.2
Gohir.D06G150400 Gossypium hirsutum HOM05D006889 ORTHO05D008614 2.8e-101 372.9 269 75.5
BcaC02g11793 Brassica carinata HOM05D006889 ORTHO05D008614 8.3e-101 371.3 360 62.2
BolC4t22767H Brassica oleracea HOM05D006889 ORTHO05D008614 8.3e-101 371.3 360 62.2
PSO384G0326 Papaver somniferum HOM05D006889 ORTHO05D008614 1.1e-100 370.9 370 62.2
C04p11290 Brassica napus HOM05D006889 ORTHO05D008614 3.1e-100 369.4 360 61.9
ECA238G0057 Erigeron canadensis HOM05D006889 ORTHO05D008614 7.0e-100 368.2 365 64.7
vmacro10779 Vaccinium macrocarpon HOM05D006889 ORTHO05D008614 9.2e-100 367.9 344 66.9
MD07G1304400 Malus domestica HOM05D006889 ORTHO05D008614 3.5e-99 365.9 362 63.5
Hma1.2p1_0164F.1_g073300 Hydrangea macrophylla HOM05D006889 ORTHO05D008614 7.8e-99 364.8 284 75.7
HanXRQChr07g0200571 Helianthus annuus HOM05D006889 ORTHO05D008614 2.3e-98 363.2 385 61.3
Phvul.002G186100 Phaseolus vulgaris HOM05D006889 ORTHO05D008614 5.0e-98 362.1 364 64.0
PGSC0003DMG400025437 Solanum tuberosum HOM05D006889 ORTHO05D008614 1.1e-97 360.9 356 63.5
Lj4g0013326 Lotus japonicus HOM05D006889 ORTHO05D008614 2.1e-96 356.7 358 63.4
BcaB02g09334 Brassica carinata HOM05D006889 ORTHO05D008614 2.0e-94 350.1 365 57.8
Glyma.05G136000 Glycine max HOM05D006889 ORTHO05D008614 2.0e-94 350.1 372 58.3
Hund18033 Selenicereus undatus HOM05D006889 ORTHO05D008614 2.0e-94 350.1 367 61.6
PSO339G0304 Papaver somniferum HOM05D006889 ORTHO05D008614 7.5e-94 348.2 370 60.0
SGA_v2.0_scaffold62G21307 Striga asiatica HOM05D006889 ORTHO05D008614 8.3e-93 344.7 378 59.0
HPP92_000052 Vanilla planifolia HOM05D006889 ORTHO05D008614 4.1e-92 342.4 330 63.9
Psat7g087400 Pisum sativum HOM05D006889 ORTHO05D008614 5.4e-92 342.0 364 60.2
arahy.Tifrunner.gnm1.ann1.T52I9D Arachis hypogaea HOM05D006889 ORTHO05D008614 7.0e-92 341.7 381 61.9
Os08g0192400 Oryza sativa ssp. japonica HOM05D006889 ORTHO05D008614 1.0e-90 337.8 354 61.0
Nitab4.5_0002651g0040 Nicotiana tabacum HOM05D006889 ORTHO05D008614 1.7e-90 337.0 359 59.9
Sc08g0005450 Simmondsia chinensis HOM05D006889 ORTHO05D008614 9.5e-89 331.3 297 70.0
ATR0081G022 Amborella trichopoda HOM05D006889 ORTHO05D008614 1.6e-88 330.5 295 69.2
arahy.Tifrunner.gnm1.ann1.I4BD9U Arachis hypogaea HOM05D006889 ORTHO05D008614 1.4e-87 327.4 409 57.0
MSTRG.4328 Avicennia marina HOM05D006889 ORTHO05D008614 9.2e-84 314.7 351 61.8
Thhalv10016833m.g Eutrema salsugineum HOM05D006889 ORTHO05D008614 3.5e-83 312.8 365 53.7
MD07G1075300 Malus domestica HOM05D006889 ORTHO05D008614 3.5e-83 312.8 378 56.6
Sp4g19020 Schrenkiella parvula HOM05D006889 ORTHO05D008614 3.5e-83 312.8 362 53.9
unitig_747.g21800 Utricularia gibba HOM05D006889 ORTHO05D008614 7.8e-83 311.6 348 59.8
CAN.G186.71 Capsicum annuum HOM05D006889 ORTHO05D008614 3.9e-82 309.3 336 58.3
Ah.14g084260 Amaranthus hybridus HOM05D006889 ORTHO05D008614 1.1e-81 307.8 351 57.3
PGR142G0052 Punica granatum HOM05D006889 ORTHO05D008614 1.9e-81 307.0 362 56.1
EL10Ac8g18884 Beta vulgaris HOM05D006889 ORTHO05D008614 8.9e-79 298.1 395 53.7
CARHR131100 Cardamine hirsuta HOM05D006889 ORTHO05D008614 2.0e-78 297.0 367 54.5
Nitab4.5_0000930g0060 Nicotiana tabacum HOM05D006889 ORTHO05D008614 3.4e-78 296.2 361 56.0
Zm00001eb260210 Zea mays HOM05D006889 ORTHO05D008614 7.5e-78 295.0 333 54.1
MELO3C005447.2 Cucumis melo HOM05D006889 ORTHO05D008614 6.4e-77 292.0 266 71.1
Rhsim01G0067600 Rhododendron simsii HOM05D006889 ORTHO05D008614 2.7e-67 260.0 374 49.5
Peaxi162Scf00135g00913 Petunia axillaris HOM05D006889 ORTHO05D008614 4.6e-67 259.2 311 57.2
Rhsim09G0213900 Rhododendron simsii HOM05D006889 ORTHO05D008614 4.6e-67 259.2 381 49.3
Lsat_1_v5_gn_2_107601 Lactuca sativa HOM05D006889 ORTHO05D008614 3.9e-66 256.1 350 53.1
DCAR_030975 Daucus carota HOM05D006889 ORTHO05D008614 3.8e-61 239.6 345 45.8
TPR.G11931 Trifolium pratense HOM05D006889 ORTHO05D008614 3.5e-59 233.0 359 49.3
SEGI_10499 Sequoiadendron giganteum HOM05D006889 ORTHO05D008614 3.3e-57 226.5 276 56.9
Pp3c14_17650 Physcomitrium patens HOM05D006889 ORTHO05D008614 4.3e-57 226.1 300 53.0
COL.COLO4_31129 Corchorus olitorius HOM05D000112 ORTHO05D000564 3.1e-55 219.9 318 50.6
AUR62039766 Chenopodium quinoa HOM05D006889 ORTHO05D008614 2.0e-54 217.2 259 57.9
AUR62028393 Chenopodium quinoa HOM05D006889 ORTHO05D008614 1.2e-51 208.0 410 41.2
SMO165G0047 Selaginella moellendorffii HOM05D006889 ORTHO05D008614 3.5e-51 206.5 333 43.8
DCAR_030020 Daucus carota HOM05D006889 ORTHO05D008614 6.7e-50 202.2 272 46.7
Gohir.D08G083500 Gossypium hirsutum HOM05D006889 ORTHO05D008614 2.1e-48 197.2 171 66.7
Mapoly0001s0482 Marchantia polymorpha HOM05D006889 ORTHO05D008614 1.7e-45 187.6 173 57.2
Gorai.004G087700 Gossypium raimondii HOM05D006889 ORTHO05D008614 4.2e-44 183.0 194 58.8
CBR_g38961 Chara braunii HOM05D006889 ORTHO05D008614 3.9e-42 176.4 341 42.2
TPR.G8913 Trifolium pratense HOM05D006889 ORTHO05D008614 4.8e-40 169.5 116 81.9
SEGI_12666 Sequoiadendron giganteum HOM05D006889 ORTHO05D008614 1.4e-39 167.9 148 60.8
ClCG01G004860 Citrullus lanatus HOM05D006889 ORTHO05D008614 1.9e-36 157.5 196 58.7
Gorai.005G015000 Gossypium raimondii HOM05D004753 ORTHO05D005920 5.3e-23 112.8 171 50.3
Gohir.D02G011800 Gossypium hirsutum HOM05D004753 ORTHO05D005920 1.5e-22 111.3 171 49.7
SHI02511 Sapria himalayana HOM05D006889 ORTHO05D008614 1.3e-21 108.2 69 87.0
TPR.G34755 Trifolium pratense HOM05D006889 ORTHO05D008614 6.5e-21 105.9 62 90.3
MCO15G439 Micromonas commoda HOM05D006889 ORTHO05D008614 8.8e-18 95.5 295 36.6
Gohir.D04G081932 Gossypium hirsutum HOM05D004753 ORTHO05D005920 5.3e-15 86.3 67 73.1
SHI02512 Sapria himalayana HOM05D006889 ORTHO05D008614 1.3e-13 81.6 87 63.2
Cre17.g728200 Chlamydomonas reinhardtii HOM05D006889 ORTHO05D008614 2.2e-13 80.9 299 31.8
PRCOL_00000609 Prasinoderma coloniale HOM05D006889 ORTHO05D008614 1.5e-12 78.2 124 39.5
SHI02510 Sapria himalayana HOM05D006889 ORTHO05D008614 1.4e-10 71.6 37 86.5
FAN28G2910 Fragaria x ananassa HOM05D006889 ORTHO05D008614 3.0e-10 70.5 137 45.3


User provided reference genes

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