Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.09G078108 Manihot esculenta HOM05D000429 ORTHO05D000352 7.5e-127 457.2 235 100.0
Manes.11G095280 Manihot esculenta HOM05D000429 ORTHO05D000352 1.5e-34 150.6 219 46.1
Manes.10G105750 Manihot esculenta HOM05D000429 ORTHO05D000352 1.8e-27 127.1 211 43.6
Manes.13G092480 Manihot esculenta HOM05D000429 ORTHO05D000352 1.2e-26 124.4 123 54.5
Manes.13G092290 Manihot esculenta HOM05D000429 ORTHO05D000352 4.4e-26 122.5 185 43.2
Manes.18G141017 Manihot esculenta HOM05D000429 ORTHO05D000352 9.8e-26 121.3 133 51.1
Manes.11G076151 Manihot esculenta HOM05D000429 ORTHO05D000352 3.7e-25 119.4 225 37.3
Manes.18G146801 Manihot esculenta HOM05D000429 ORTHO05D000352 1.4e-24 117.5 115 53.0
Manes.16G049870 Manihot esculenta HOM05D000429 ORTHO05D000352 4.1e-24 115.9 119 49.6
Manes.05G115092 Manihot esculenta HOM05D000429 ORTHO05D000352 2.7e-23 113.2 189 40.7
Manes.16G047550 Manihot esculenta HOM05D000429 ORTHO05D000352 1.7e-22 110.5 204 37.3
Manes.13G077768 Manihot esculenta HOM05D000429 ORTHO05D000352 6.6e-22 108.6 115 48.7
Manes.01G082850 Manihot esculenta HOM05D000429 ORTHO05D000352 8.6e-22 108.2 115 51.3
Manes.15G107550 Manihot esculenta HOM05D000429 ORTHO05D000352 1.5e-21 107.5 120 47.5
Manes.18G145610 Manihot esculenta HOM05D000429 ORTHO05D000352 3.6e-20 102.8 210 34.3
Manes.07G030402 Manihot esculenta HOM05D000429 ORTHO05D000352 2.3e-19 100.1 116 50.0
Manes.04G060101 Manihot esculenta HOM05D000429 ORTHO05D000352 3.0e-19 99.8 116 47.4
Oeu038088.4 Olea europaea HOM05D000429 ORTHO05D000352 1.8e-16 90.5 274 28.5
Oeu033810.1 Olea europaea HOM05D000429 ORTHO05D000352 1.3e-14 84.3 273 27.5
Oeu033863.1 Olea europaea HOM05D000429 ORTHO05D000352 1.3e-14 84.3 274 27.0
Oeu037482.1 Olea europaea HOM05D000429 ORTHO05D000352 1.3e-14 84.3 274 26.3
Manes.16G015332 Manihot esculenta HOM05D000429 ORTHO05D000352 1.7e-14 84.0 271 28.0
Oeu004063.1 Olea europaea HOM05D000429 ORTHO05D000352 2.3e-14 83.6 271 26.2
Oeu058894.1 Olea europaea HOM05D000047 ORTHO05D008058 2.3e-14 83.6 274 26.6
Manes.16G059350 Manihot esculenta HOM05D000429 ORTHO05D000352 5.0e-14 82.4 76 51.3
Oeu033492.1 Olea europaea HOM05D000047 ORTHO05D008058 6.6e-14 82.0 274 27.0
Oeu044645.1 Olea europaea HOM05D000429 ORTHO05D000352 1.1e-13 81.3 269 26.4
Oeu064652.1 Olea europaea HOM05D000429 ORTHO05D000352 1.1e-13 81.3 274 26.6
Oeu057937.1 Olea europaea HOM05D000429 ORTHO05D000352 1.5e-13 80.9 258 27.1
Manes.07G072438 Manihot esculenta HOM05D000429 ORTHO05D000352 7.3e-13 78.6 140 35.0
Manes.05G115333 Manihot esculenta HOM05D000429 ORTHO05D000352 1.2e-12 77.8 220 30.9
Oeu064691.1 Olea europaea HOM05D000429 ORTHO05D000352 1.2e-12 77.8 274 25.9
Manes.02G203175 Manihot esculenta HOM05D000429 ORTHO05D000352 1.6e-12 77.4 263 26.2
Oeu014370.1 Olea europaea HOM05D000429 ORTHO05D000352 8.0e-12 75.1 251 28.7
Oeu043216.1 Olea europaea HOM05D000429 ORTHO05D000352 1.0e-11 74.7 256 26.2
Os03g0439900 Oryza sativa ssp. japonica HOM05D000429 ORTHO05D000352 8.9e-11 71.6 137 36.5
DCAR_031921 Daucus carota HOM05D000047 ORTHO05D000044 1.5e-10 70.9 259 24.3
TWI75G0951 Tripterygium wilfordii HOM05D000429 ORTHO05D000352 4.4e-10 69.3 228 29.4
CANSAT21G2111 Cannabis sativa HOM05D008422 ORTHO05D000352 5.8e-10 68.9 283 25.1
QL93p0205_0258 Quercus lobata HOM05D000047 ORTHO05D000044 5.8e-10 68.9 276 25.0
PSO063G5078 Papaver somniferum HOM05D000429 ORTHO05D000352 7.5e-10 68.6 269 24.5
CANSAT78G2291 Cannabis sativa HOM05D000429 ORTHO05D000352 9.8e-10 68.2 222 25.2
Oeu010062.1 Olea europaea HOM05D000429 ORTHO05D000352 9.8e-10 68.2 248 26.6
arahy.Tifrunner.gnm1.ann1.99K3J2 Arachis hypogaea HOM05D000047 ORTHO05D000044 1.7e-09 67.4 255 23.5
DCAR_031974 Daucus carota HOM05D000429 ORTHO05D000352 2.9e-09 66.6 246 25.6
arahy.Tifrunner.gnm1.ann1.UC2LFY Arachis hypogaea HOM05D000429 ORTHO05D000352 4.9e-09 65.9 255 23.9
CSS0008580 Camellia sinensis var. sinensis HOM05D000047 ORTHO05D000044 6.4e-09 65.5 137 33.6
CANSAT56G4516 Cannabis sativa HOM05D000429 ORTHO05D000352 6.4e-09 65.5 235 26.0
CANSAT56G0797 Cannabis sativa HOM05D000429 ORTHO05D000352 8.3e-09 65.1 262 26.3
CANSAT21G1062 Cannabis sativa HOM05D000429 ORTHO05D000352 3.2e-08 63.2 228 25.4
CANSAT56G4150 Cannabis sativa HOM05D000429 ORTHO05D000352 3.2e-08 63.2 272 23.9
ECA236G3431 Erigeron canadensis HOM05D000047 ORTHO05D000044 3.2e-08 63.2 270 24.1
HanXRQChr13g0387201 Helianthus annuus HOM05D000047 ORTHO05D000044 3.2e-08 63.2 236 26.3
ECA233G0988 Erigeron canadensis HOM05D000429 ORTHO05D000352 5.4e-08 62.4 223 26.5
Oeu045230.1 Olea europaea HOM05D000047 ORTHO05D000044 5.4e-08 62.4 140 32.9
TWI77G0163 Tripterygium wilfordii HOM05D000429 ORTHO05D000352 5.4e-08 62.4 245 24.9
CANSAT35G1271 Cannabis sativa HOM05D000429 ORTHO05D000352 9.2e-08 61.6 274 24.5
ECA247G0519 Erigeron canadensis HOM05D000047 ORTHO05D000044 1.2e-07 61.2 217 29.0
TWI38G1677 Tripterygium wilfordii HOM05D000429 ORTHO05D000352 1.2e-07 61.2 279 25.4
CANSAT64G1649 Cannabis sativa HOM05D000429 ORTHO05D000352 1.6e-07 60.8 253 24.1
Ah.01g016570 Amaranthus hybridus HOM05D016717 ORTHO05D000352 2.0e-07 60.5 231 27.3
CANSAT01G2793 Cannabis sativa HOM05D008422 ORTHO05D000352 2.0e-07 60.5 200 27.5
Potri.006G157801 Populus trichocarpa HOM05D000429 ORTHO05D000352 2.7e-07 60.1 121 28.9
QL05p012956 Quercus lobata HOM05D000047 ORTHO05D000044 3.5e-07 59.7 266 25.2
QL08p065228 Quercus lobata HOM05D000047 ORTHO05D000044 3.5e-07 59.7 266 25.2
CANSAT54G1627 Cannabis sativa HOM05D000429 ORTHO05D000352 4.6e-07 59.3 264 23.1
MBI19_g15939_MAGBIO Magnolia biondii HOM05D000429 ORTHO05D008058 4.6e-07 59.3 226 25.2
QL07p045945 Quercus lobata HOM05D000047 ORTHO05D000044 4.6e-07 59.3 257 24.1
QL11p049215 Quercus lobata HOM05D000047 ORTHO05D000044 4.6e-07 59.3 266 25.2
ECA240G1667 Erigeron canadensis HOM05D003069 ORTHO05D002578 7.8e-07 58.5 205 25.4
Oeu039992.1 Olea europaea HOM05D000429 ORTHO05D000352 1.0e-06 58.2 142 30.3
TWI09G1035 Tripterygium wilfordii HOM05D000429 ORTHO05D000352 1.3e-06 57.8 279 24.4
TWI23G0324 Tripterygium wilfordii HOM05D000429 ORTHO05D000352 1.3e-06 57.8 279 24.4
TWI36G0915 Tripterygium wilfordii HOM05D000429 ORTHO05D000352 1.3e-06 57.8 279 24.4
TWI36G1698 Tripterygium wilfordii HOM05D000429 ORTHO05D000352 1.3e-06 57.8 279 24.4
TWI36G1732 Tripterygium wilfordii HOM05D000429 ORTHO05D000352 1.3e-06 57.8 204 28.4
TWI38G0623 Tripterygium wilfordii HOM05D000429 ORTHO05D000352 1.3e-06 57.8 279 24.4
TWI14G1011 Tripterygium wilfordii HOM05D000429 ORTHO05D000352 1.7e-06 57.4 279 24.0
TWI14G0816 Tripterygium wilfordii HOM05D000429 ORTHO05D000352 2.3e-06 57.0 279 24.7
CANSAT64G0185 Cannabis sativa HOM05D000429 ORTHO05D000352 3.0e-06 56.6 273 24.2
MBI08_g16120_MAGBIO Magnolia biondii HOM05D000429 ORTHO05D000352 3.0e-06 56.6 112 31.2
TWI73G1041 Tripterygium wilfordii HOM05D000429 ORTHO05D000352 3.0e-06 56.6 279 23.7
TWI81G1059 Tripterygium wilfordii HOM05D000429 ORTHO05D000352 3.9e-06 56.2 241 25.7
ECA247G2441 Erigeron canadensis HOM05D000047 ORTHO05D000044 5.0e-06 55.8 256 26.6
HanXRQChr10g0279851 Helianthus annuus HOM05D000047 ORTHO05D000044 5.0e-06 55.8 266 27.4
PSO170G0352 Papaver somniferum HOM05D000429 ORTHO05D000352 5.0e-06 55.8 264 21.6
TWI15G0819 Tripterygium wilfordii HOM05D000429 ORTHO05D000352 5.0e-06 55.8 279 24.0
TWI38G1293 Tripterygium wilfordii HOM05D000429 ORTHO05D000352 5.0e-06 55.8 279 24.0
arahy.Tifrunner.gnm1.ann1.E3E3WX Arachis hypogaea HOM05D000429 ORTHO05D000352 6.6e-06 55.5 102 30.4
CANSAT25G3092 Cannabis sativa HOM05D000429 ORTHO05D000352 6.6e-06 55.5 257 23.0
CANSAT80G0962 Cannabis sativa HOM05D000429 ORTHO05D000352 8.6e-06 55.1 257 23.3
ECA234G3493 Erigeron canadensis HOM05D000006 ORTHO05D000001 8.6e-06 55.1 222 27.0
PSO832G4394 Papaver somniferum HOM05D000429 ORTHO05D000352 8.6e-06 55.1 278 20.1
TWI38G1491 Tripterygium wilfordii HOM05D000429 ORTHO05D000352 8.6e-06 55.1 279 24.4


User provided reference genes

Program Settings