Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.09G076567 Manihot esculenta HOM05D000446 ORTHO05D250489 1.7e-23 111.7 53 100.0
Manes.02G225100 Manihot esculenta HOM05D000446 ORTHO05D000321 1.8e-07 58.5 29 89.7
QL11p019646 Quercus lobata HOM05D000446 ORTHO05D000321 3.9e-07 57.4 42 69.0
CDE08G0743 Ceratophyllum demersum HOM05D000446 ORTHO05D000321 6.7e-07 56.6 29 82.8
Lj5A243T95 Lonicera japonica HOM05D000446 ORTHO05D000321 1.1e-06 55.8 29 82.8
TAR625G0108 Trochodendron aralioides HOM05D000446 ORTHO05D000321 1.5e-06 55.5 28 85.7
FvH4_5g30710 Fragaria vesca HOM05D000446 ORTHO05D000321 1.9e-06 55.1 29 79.3
FAN08G2972 Fragaria x ananassa HOM05D000446 ORTHO05D000321 1.9e-06 55.1 29 79.3
FAN13G1195 Fragaria x ananassa HOM05D000446 ORTHO05D000321 1.9e-06 55.1 29 79.3
FAN18G0385 Fragaria x ananassa HOM05D000446 ORTHO05D000321 1.9e-06 55.1 29 79.3
Glyma.08G180900 Glycine max HOM05D000446 ORTHO05D000321 1.9e-06 55.1 29 82.8
Glyma.15G051500 Glycine max HOM05D000446 ORTHO05D000321 1.9e-06 55.1 29 82.8
Manes.04G057600 Manihot esculenta HOM05D000446 ORTHO05D000321 1.9e-06 55.1 29 82.8
Phvul.006G208200 Phaseolus vulgaris HOM05D000446 ORTHO05D000321 1.9e-06 55.1 29 82.8
Sabra01G0160100 Salix brachista HOM05D000446 ORTHO05D000321 1.9e-06 55.1 29 82.8
VMungo0540G1670 Vigna mungo HOM05D000446 ORTHO05D000321 1.9e-06 55.1 29 82.8
Eucgr.G00649 Eucalyptus grandis HOM05D000446 ORTHO05D000321 2.5e-06 54.7 29 82.8
Eucgr.G00650 Eucalyptus grandis HOM05D000446 ORTHO05D000321 2.5e-06 54.7 29 82.8
HanXRQChr10g0293191 Helianthus annuus HOM05D000446 ORTHO05D000321 2.5e-06 54.7 29 79.3
Lj6g0005949 Lotus japonicus HOM05D000446 ORTHO05D000321 2.5e-06 54.7 29 82.8
Potri.001G206800 Populus trichocarpa HOM05D000446 ORTHO05D000321 2.5e-06 54.7 29 82.8
Potri.003G022900 Populus trichocarpa HOM05D000446 ORTHO05D000321 2.5e-06 54.7 29 82.8
Sed0003861 Sechium edule HOM05D000446 ORTHO05D000321 2.5e-06 54.7 29 82.8
Ah.14g085410 Amaranthus hybridus HOM05D000446 ORTHO05D000321 3.3e-06 54.3 29 79.3
AUR62031299 Chenopodium quinoa HOM05D000446 ORTHO05D000321 3.3e-06 54.3 29 79.3
Haze_10627 Corylus avellana HOM05D000446 ORTHO05D000321 3.3e-06 54.3 29 82.8
MBI02_g18925_MAGBIO Magnolia biondii HOM05D000446 ORTHO05D000321 3.3e-06 54.3 29 75.9
PGR031G3497 Punica granatum HOM05D000446 ORTHO05D000321 3.3e-06 54.3 29 79.3
PGR042G3034 Punica granatum HOM05D000446 ORTHO05D000321 3.3e-06 54.3 29 79.3
Sed0013621 Sechium edule HOM05D000446 ORTHO05D000321 3.3e-06 54.3 29 82.8
TWI59G0347 Tripterygium wilfordii HOM05D000446 ORTHO05D000321 3.3e-06 54.3 29 79.3
arahy.Tifrunner.gnm1.ann1.DAE2HF Arachis hypogaea HOM05D000446 ORTHO05D000321 4.3e-06 53.9 29 79.3
arahy.Tifrunner.gnm1.ann1.YM2442 Arachis hypogaea HOM05D000446 ORTHO05D000321 4.3e-06 53.9 29 79.3
Gohir.A04G112400 Gossypium hirsutum HOM05D000446 ORTHO05D000321 4.3e-06 53.9 29 79.3
Medtr2g008240 Medicago truncatula HOM05D000446 ORTHO05D000321 4.3e-06 53.9 29 79.3
SEGI_06298 Sequoiadendron giganteum HOM05D000446 ORTHO05D000321 4.3e-06 53.9 28 82.1
SEGI_18758 Sequoiadendron giganteum HOM05D000446 ORTHO05D000321 4.3e-06 53.9 28 82.1
SEGI_29489 Sequoiadendron giganteum HOM05D000446 ORTHO05D000321 4.3e-06 53.9 28 82.1
TPR.G19741 Trifolium pratense HOM05D000446 ORTHO05D000321 4.3e-06 53.9 29 82.8
TAR381G0928 Trochodendron aralioides HOM05D000446 ORTHO05D005151 4.3e-06 53.9 28 82.1
TAR628G0467 Trochodendron aralioides HOM05D000446 ORTHO05D000321 4.3e-06 53.9 28 82.1
GSVIVG01013328001 Vitis vinifera HOM05D000446 ORTHO05D000321 4.3e-06 53.9 29 75.9
GSVIVG01022541001 Vitis vinifera HOM05D000446 ORTHO05D000321 4.3e-06 53.9 29 75.9
GSVIVG01029801001 Vitis vinifera HOM05D000446 ORTHO05D000321 4.3e-06 53.9 29 75.9
BolC2t12413H Brassica oleracea HOM05D000446 ORTHO05D000321 5.6e-06 53.5 29 79.3
CSS0019696 Camellia sinensis var. sinensis HOM05D000446 ORTHO05D000321 5.6e-06 53.5 29 75.9
ECA234G3034 Erigeron canadensis HOM05D000446 ORTHO05D000321 5.6e-06 53.5 29 79.3
Gohir.D04G153400 Gossypium hirsutum HOM05D000446 ORTHO05D000321 5.6e-06 53.5 29 79.3
Gorai.012G140300 Gossypium raimondii HOM05D000446 ORTHO05D000321 5.6e-06 53.5 29 79.3
Lalb_Chr18g0060641 Lupinus albus HOM05D000446 ORTHO05D000321 5.6e-06 53.5 28 82.1
Lalb_Chr20g0123131 Lupinus albus HOM05D000446 ORTHO05D000321 5.6e-06 53.5 29 79.3
MD08G1221800 Malus domestica HOM05D000446 ORTHO05D000321 5.6e-06 53.5 29 82.8
Rhsim05G0110800 Rhododendron simsii HOM05D000446 ORTHO05D000321 5.6e-06 53.5 29 79.3
Sabra03G0014400 Salix brachista HOM05D000446 ORTHO05D000321 5.6e-06 53.5 29 79.3
Thecc.02G143200 Theobroma cacao HOM05D000446 ORTHO05D000321 5.6e-06 53.5 29 75.9
TWI39G0089 Tripterygium wilfordii HOM05D000446 ORTHO05D000321 5.6e-06 53.5 29 86.2
vmacro19913 Vaccinium macrocarpon HOM05D000446 ORTHO05D000321 5.6e-06 53.5 29 79.3
Aqoxy6G00469 Aquilegia oxysepala HOM05D000446 ORTHO05D000321 7.4e-06 53.1 28 78.6
CANSAT11G1257 Cannabis sativa HOM05D000446 ORTHO05D000321 7.4e-06 53.1 29 75.9
Ca_18337_v3 Cicer arietinum L. HOM05D000446 ORTHO05D000321 7.4e-06 53.1 29 79.3
Duzib132G0552 Durio zibethinus HOM05D000446 ORTHO05D000321 7.4e-06 53.1 29 75.9
Duzib132G1148 Durio zibethinus HOM05D000446 ORTHO05D000321 7.4e-06 53.1 29 75.9
Eucgr.G00651 Eucalyptus grandis HOM05D000446 ORTHO05D000321 7.4e-06 53.1 28 82.1
Eucgr.G00653 Eucalyptus grandis HOM05D000446 ORTHO05D000321 7.4e-06 53.1 28 82.1
Gohir.A03G171800 Gossypium hirsutum HOM05D000446 ORTHO05D000321 7.4e-06 53.1 29 75.9
Gohir.D02G195100 Gossypium hirsutum HOM05D000446 ORTHO05D000321 7.4e-06 53.1 29 75.9
Gorai.005G218000 Gossypium raimondii HOM05D000446 ORTHO05D000321 7.4e-06 53.1 29 75.9
Lj4g0013580 Lotus japonicus HOM05D000446 ORTHO05D000321 7.4e-06 53.1 29 79.3
Medtr4g094285 Medicago truncatula HOM05D000446 ORTHO05D000321 7.4e-06 53.1 29 79.3
PSO541G5891 Papaver somniferum HOM05D000446 ORTHO05D000321 7.4e-06 53.1 29 75.9
Phvul.002G206800 Phaseolus vulgaris HOM05D000446 ORTHO05D000321 7.4e-06 53.1 29 79.3
Psat7g097400 Pisum sativum HOM05D000446 ORTHO05D000321 7.4e-06 53.1 29 79.3
RcHm_v2.0_Chr7g0225551 Rosa chinensis HOM05D000446 ORTHO05D000321 7.4e-06 53.1 29 75.9
VMungo0251G1843 Vigna mungo HOM05D000446 ORTHO05D000321 7.4e-06 53.1 29 79.3
Dinv19317 Davidia involucrata HOM05D000446 ORTHO05D000321 9.6e-06 52.8 29 75.9
RcHm_v2.0_Chr7g0225581 Rosa chinensis HOM05D000446 ORTHO05D000321 9.6e-06 52.8 28 78.6


User provided reference genes

Program Settings