Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.09G070300 Manihot esculenta HOM05D005487 ORTHO05D007280 3.7e-257 891.0 422 100.0
QL05p069756 Quercus lobata HOM05D005487 ORTHO05D007280 2.6e-226 788.5 418 88.5
Atru.chr1.2460 Acer truncatum HOM05D005487 ORTHO05D007280 3.7e-225 784.6 418 88.5
CiPaw.10G077700 Carya illinoinensis HOM05D005487 ORTHO05D007280 2.4e-224 781.9 420 87.1
Duzib192G1033 Durio zibethinus HOM05D005487 ORTHO05D007280 1.0e-222 776.5 417 86.8
Potri.006G009200 Populus trichocarpa HOM05D005487 ORTHO05D007280 3.8e-222 774.6 418 85.6
Ciclev10015367m.g Citrus clementina HOM05D005487 ORTHO05D007280 1.9e-221 772.3 420 85.7
CSS0007892 Camellia sinensis var. sinensis HOM05D005487 ORTHO05D007280 2.1e-220 768.8 418 85.4
Cfa000109 Carpinus fangiana HOM05D005487 ORTHO05D007280 2.1e-220 768.8 420 86.2
Nn1g07355 Nelumbo nucifera HOM05D005487 ORTHO05D007280 3.6e-220 768.1 418 84.9
RcHm_v2.0_Chr5g0001571 Rosa chinensis HOM05D005487 ORTHO05D007280 8.0e-220 766.9 419 85.4
Thecc.06G232800 Theobroma cacao HOM05D005487 ORTHO05D007280 1.0e-219 766.5 418 85.6
FvH4_3g01030 Fragaria vesca HOM05D005487 ORTHO05D007280 2.3e-219 765.4 417 85.4
Prupe.4G011100 Prunus persica HOM05D005487 ORTHO05D007280 3.0e-219 765.0 420 85.7
Nn1g03329 Nelumbo nucifera HOM05D005487 ORTHO05D007280 6.7e-219 763.8 418 84.7
MD10G1331100 Malus domestica HOM05D005487 ORTHO05D007280 8.8e-219 763.5 416 86.1
TAR724G0004 Trochodendron aralioides HOM05D005487 ORTHO05D007280 8.8e-219 763.5 418 84.9
Hma1.2p1_0135F.1_g061730 Hydrangea macrophylla HOM05D005487 ORTHO05D007280 3.3e-218 761.5 417 85.6
PGR004G0814 Punica granatum HOM05D005487 ORTHO05D007280 9.7e-218 760.0 418 83.7
Cpa.g.sc75.119 Carica papaya HOM05D005487 ORTHO05D007280 1.7e-217 759.2 421 83.1
FAN21G2054 Fragaria x ananassa HOM05D005487 ORTHO05D007280 2.4e-216 755.4 417 84.7
TWI38G0871 Tripterygium wilfordii HOM05D005487 ORTHO05D007280 3.1e-216 755.0 418 84.4
GSVIVG01003351001 Vitis vinifera HOM05D005487 ORTHO05D007280 4.1e-216 754.6 420 83.3
Actinidia26862 Actinidia chinensis HOM05D005487 ORTHO05D007280 5.3e-216 754.2 419 83.5
TAR629G3393 Trochodendron aralioides HOM05D005487 ORTHO05D007280 7.0e-216 753.8 418 82.8
Oeu044422.1 Olea europaea HOM05D005487 ORTHO05D007280 9.1e-216 753.4 418 83.5
Actinidia11881 Actinidia chinensis HOM05D005487 ORTHO05D007280 2.0e-215 752.3 418 84.0
Gohir.A05G174500 Gossypium hirsutum HOM05D005487 ORTHO05D007280 1.0e-214 750.0 417 84.7
Gorai.010G250300 Gossypium raimondii HOM05D005487 ORTHO05D007280 1.3e-214 749.6 417 83.9
Gohir.A06G205600 Gossypium hirsutum HOM05D005487 ORTHO05D007280 1.7e-214 749.2 417 83.9
Gorai.009G182900 Gossypium raimondii HOM05D005487 ORTHO05D007280 5.0e-214 747.7 417 84.7
Gohir.D06G215900 Gossypium hirsutum HOM05D005487 ORTHO05D007280 6.5e-214 747.3 417 83.7
Nitab4.5_0000143g0260 Nicotiana tabacum HOM05D005487 ORTHO05D007280 1.1e-213 746.5 418 81.8
CANSAT56G2574 Cannabis sativa HOM05D005487 ORTHO05D007280 1.5e-213 746.1 420 81.4
THA.LOC104809472 Tarenaya hassleriana HOM05D005487 ORTHO05D007280 1.9e-213 745.7 418 82.8
Rhsim13G0146300 Rhododendron simsii HOM05D005487 ORTHO05D007280 4.2e-213 744.6 445 79.3
COL.COLO4_31878 Corchorus olitorius HOM05D005487 ORTHO05D007280 7.2e-213 743.8 415 83.6
RhsimUnG0109400 Rhododendron simsii HOM05D005487 ORTHO05D007280 1.2e-212 743.0 445 79.1
AL1G23300 Arabidopsis lyrata HOM05D005487 ORTHO05D007280 1.6e-212 742.7 418 81.3
BolC5t29858H Brassica oleracea HOM05D005487 ORTHO05D007280 2.1e-212 742.3 418 81.3
HanXRQChr10g0284101 Helianthus annuus HOM05D005487 ORTHO05D007280 2.1e-212 742.3 422 82.2
MBI19_g29429_MAGBIO Magnolia biondii HOM05D005487 ORTHO05D007280 2.1e-212 742.3 419 81.1
Dinv07399 Davidia involucrata HOM05D005487 ORTHO05D007280 3.6e-212 741.5 400 86.8
EL10Ac8g20177 Beta vulgaris HOM05D005487 ORTHO05D007280 4.7e-212 741.1 418 81.6
Gohir.D05G177500 Gossypium hirsutum HOM05D005487 ORTHO05D007280 4.7e-212 741.1 417 83.9
Psat1g176520 Pisum sativum HOM05D005487 ORTHO05D007280 4.7e-212 741.1 418 80.6
Lj2C262G3 Lonicera japonica HOM05D005487 ORTHO05D007280 6.1e-212 740.7 413 84.3
Nitab4.5_0001198g0060 Nicotiana tabacum HOM05D005487 ORTHO05D007280 8.0e-212 740.3 418 81.3
AT1G12050 Arabidopsis thaliana HOM05D005487 ORTHO05D007280 1.0e-211 740.0 418 81.6
CARHR012410 Cardamine hirsuta HOM05D005487 ORTHO05D007280 1.0e-211 740.0 418 80.9
Sp1g10720 Schrenkiella parvula HOM05D005487 ORTHO05D007280 1.4e-211 739.6 418 80.6
Carub.0001s1173 Capsella rubella HOM05D005487 ORTHO05D007280 4.0e-211 738.0 418 80.4
Sed0025030 Sechium edule HOM05D005487 ORTHO05D007280 6.8e-211 737.3 418 82.1
Ca_00719_v3 Cicer arietinum L. HOM05D005487 ORTHO05D007280 8.8e-211 736.9 418 81.1
Cc09_g00910 Coffea canephora HOM05D005487 ORTHO05D007280 8.8e-211 736.9 418 80.6
BcaB02g06431 Brassica carinata HOM05D005487 ORTHO05D007280 2.0e-210 735.7 419 80.7
arahy.Tifrunner.gnm1.ann1.8PBE23 Arachis hypogaea HOM05D005487 ORTHO05D007280 3.4e-210 734.9 420 79.5
SalBow8G2024 Salvia bowleyana HOM05D005487 ORTHO05D007280 4.4e-210 734.6 420 81.2
AUR62021869 Chenopodium quinoa HOM05D005487 ORTHO05D007280 7.5e-210 733.8 420 81.4
Thhalv10007724m.g Eutrema salsugineum HOM05D005487 ORTHO05D007280 7.5e-210 733.8 418 80.4
Sopen11g006950 Solanum pennellii HOM05D005487 ORTHO05D007280 7.5e-210 733.8 418 79.7
Medtr2g025640 Medicago truncatula HOM05D005487 ORTHO05D007280 2.2e-209 732.3 418 79.9
MSTRG.16025 Avicennia marina HOM05D005487 ORTHO05D007280 3.7e-209 731.5 420 81.0
Solyc11g012160.2 Solanum lycopersicum HOM05D005487 ORTHO05D007280 4.8e-209 731.1 418 78.9
TPR.G13057 Trifolium pratense HOM05D005487 ORTHO05D007280 6.3e-209 730.7 418 79.9
arahy.Tifrunner.gnm1.ann1.61KG5W Arachis hypogaea HOM05D005487 ORTHO05D007280 8.3e-209 730.3 420 79.3
PSO764G0115 Papaver somniferum HOM05D005487 ORTHO05D007280 1.8e-208 729.2 419 79.5
ClCG01G021500 Citrullus lanatus HOM05D005487 ORTHO05D007280 5.4e-208 727.6 421 81.2
Eucgr.L00543 Eucalyptus grandis HOM05D005487 ORTHO05D007280 1.6e-207 726.1 451 76.3
CAN.G1186.29 Capsicum annuum HOM05D005487 ORTHO05D007280 7.7e-207 723.8 419 80.2
Lj6g0015557 Lotus japonicus HOM05D005487 ORTHO05D007280 1.3e-206 723.0 418 79.4
Peaxi162Scf00558g00518 Petunia axillaris HOM05D005487 ORTHO05D007280 1.3e-206 723.0 458 74.7
PSO210G3736 Papaver somniferum HOM05D005487 ORTHO05D007280 1.7e-206 722.6 419 78.8
VMungo0540G1792 Vigna mungo HOM05D005487 ORTHO05D007280 3.8e-206 721.5 418 78.9
FAN25G0861 Fragaria x ananassa HOM05D005487 ORTHO05D007280 5.0e-206 721.1 397 85.4
Phvul.006G143500 Phaseolus vulgaris HOM05D005487 ORTHO05D007280 5.0e-206 721.1 418 78.5
Lsat_1_v5_gn_8_64401 Lactuca sativa HOM05D005487 ORTHO05D007280 8.6e-206 720.3 426 80.5
Lalb_Chr15g0087971 Lupinus albus HOM05D005487 ORTHO05D007280 1.1e-205 719.9 420 78.3
CsaV3_6G048520 Cucumis sativus L. HOM05D005487 ORTHO05D007280 1.5e-205 719.5 419 80.7
Glyma.15G114300 Glycine max HOM05D005487 ORTHO05D007280 2.5e-205 718.8 418 78.0
Glyma.09G010000 Glycine max HOM05D005487 ORTHO05D007280 4.2e-205 718.0 418 78.5
Aa31LG1G2680 Aethionema arabicum HOM05D005487 ORTHO05D007280 5.5e-205 717.6 418 79.2
MELO3C007433.2 Cucumis melo HOM05D005487 ORTHO05D007280 1.6e-204 716.1 419 80.4
PGSC0003DMG400013273 Solanum tuberosum HOM05D005487 ORTHO05D007280 2.0e-202 709.1 503 67.4
Aqoxy1G04106 Aquilegia oxysepala HOM05D005487 ORTHO05D007280 1.7e-201 706.1 422 77.3
BcaC05g25225 Brassica carinata HOM05D005487 ORTHO05D007280 2.8e-201 705.3 402 80.6
C05p11110 Brassica napus HOM05D005487 ORTHO05D007280 6.3e-201 704.1 402 80.6
A06p09440 Brassica napus HOM05D005487 ORTHO05D007280 9.2e-200 700.3 401 80.5
BraA06t24129Z Brassica rapa HOM05D005487 ORTHO05D007280 9.2e-200 700.3 401 80.5
vmacro03645 Vaccinium macrocarpon HOM05D005487 ORTHO05D007280 2.7e-199 698.7 404 81.9
ATR1101G021 Amborella trichopoda HOM05D005487 ORTHO05D007280 4.5e-199 698.0 420 77.6
Sopen04g006840 Solanum pennellii HOM05D005487 ORTHO05D007280 1.5e-197 693.0 418 77.3
Hund23409 Selenicereus undatus HOM05D005487 ORTHO05D007280 1.9e-197 692.6 395 81.5
Haze_06922 Corylus avellana HOM05D005487 ORTHO05D007280 1.6e-196 689.5 434 77.2
CAN.G1263.14 Capsicum annuum HOM05D005487 ORTHO05D007280 2.1e-196 689.1 419 76.6
PGSC0003DMG400023608 Solanum tuberosum HOM05D005487 ORTHO05D007280 2.1e-196 689.1 418 76.8
HPP92_027542 Vanilla planifolia HOM05D005487 ORTHO05D007280 2.3e-195 685.6 427 73.5
SGA_v2.0_scaffold7G03757 Striga asiatica HOM05D005487 ORTHO05D007280 2.0e-194 682.6 431 75.2
HPP92_003014 Vanilla planifolia HOM05D005487 ORTHO05D007280 2.0e-194 682.6 426 73.2
Haze_06917 Corylus avellana HOM05D005487 ORTHO05D007280 2.2e-193 679.1 458 72.9
Solyc04g014730.4 Solanum lycopersicum HOM05D005487 ORTHO05D007280 1.4e-192 676.4 412 76.0
Peaxi162Scf00442g00414 Petunia axillaris HOM05D005487 ORTHO05D007280 5.4e-192 674.5 455 70.5
Os02g0196800 Oryza sativa ssp. japonica HOM05D005487 ORTHO05D007280 7.8e-191 670.6 422 71.1
CDE07G0927 Ceratophyllum demersum HOM05D005487 ORTHO05D007280 1.0e-190 670.2 428 75.0
Zm00001eb236160 Zea mays HOM05D005487 ORTHO05D007280 8.0e-188 660.6 420 70.7
Sabra06G0007000 Salix brachista HOM05D005487 ORTHO05D007280 1.3e-185 653.3 417 75.3
DCAR_027826 Daucus carota HOM05D005487 ORTHO05D007280 7.0e-184 647.5 420 72.9
unitig_0.g999 Utricularia gibba HOM05D005487 ORTHO05D007280 2.0e-183 646.0 384 76.6
AUR62012785 Chenopodium quinoa HOM05D005487 ORTHO05D007280 1.1e-179 633.6 401 75.3
Duzib235G0086 Durio zibethinus HOM05D005487 ORTHO05D007280 3.4e-170 602.1 373 77.2
CSS0007230 Camellia sinensis var. sinensis HOM05D005487 ORTHO05D007280 9.6e-165 583.9 437 67.5
Migut.M01391 Erythranthe guttata HOM05D005487 ORTHO05D007280 1.6e-164 583.2 418 68.4
SMO137G0224 Selaginella moellendorffii HOM05D005487 ORTHO05D007280 6.2e-164 581.3 417 67.1
Sc17g0007720 Simmondsia chinensis HOM05D005487 ORTHO05D007280 9.0e-163 577.4 300 87.3
Pp3c4_7990 Physcomitrium patens HOM05D005487 ORTHO05D007280 1.5e-162 576.6 421 64.6
Mapoly0022s0035 Marchantia polymorpha HOM05D005487 ORTHO05D007280 1.3e-161 573.5 419 62.8
Zm00001eb205930 Zea mays HOM05D005487 ORTHO05D007280 9.3e-160 567.4 358 71.5
Ah.09g234260 Amaranthus hybridus HOM05D005487 ORTHO05D007280 2.3e-158 562.8 418 67.0
AagrBONN_evm.TU.Sc2ySwM_344.3343 Anthoceros agrestis HOM05D005487 ORTHO05D007280 6.9e-155 551.2 418 62.4
Pp3c13_16620 Physcomitrium patens HOM05D005487 ORTHO05D007280 8.7e-142 507.7 358 65.6
Haze_26411 Corylus avellana HOM05D005487 ORTHO05D007280 9.0e-139 497.7 421 54.9
RcHm_v2.0_Chr3g0477951 Rosa chinensis HOM05D005487 ORTHO05D007280 1.5e-133 480.3 464 57.3
ECA236G3803 Erigeron canadensis HOM05D005487 ORTHO05D007280 7.4e-133 478.0 274 80.3
RcHm_v2.0_Chr3g0484131 Rosa chinensis HOM05D005487 ORTHO05D007280 7.4e-133 478.0 463 57.2
CBR_g46703 Chara braunii HOM05D005487 ORTHO05D007280 4.6e-127 458.8 471 50.1
Cre17.g732802 Chlamydomonas reinhardtii HOM05D005487 ORTHO05D007280 5.0e-121 438.7 469 48.6
PRCOL_00001448 Prasinoderma coloniale HOM05D005487 ORTHO05D007280 1.1e-109 401.0 424 49.5
Gorai.001G209700 Gossypium raimondii HOM05D005487 ORTHO05D007280 2.7e-50 203.8 115 80.9
Gohir.D07G188750 Gossypium hirsutum HOM05D005487 ORTHO05D007280 6.7e-33 146.0 115 62.6
RcHm_v2.0_Chr5g0003621 Rosa chinensis HOM05D005487 ORTHO05D007280 5.6e-32 142.9 102 67.6
C06p15210 Brassica napus HOM05D005487 ORTHO05D042797 1.6e-31 141.4 89 74.2
BolC6t36696H Brassica oleracea HOM05D005487 ORTHO05D042797 1.6e-31 141.4 89 74.2
SEGI_36702 Sequoiadendron giganteum HOM05D005487 ORTHO05D007280 5.8e-29 132.9 93 67.7
Gohir.D13G151750 Gossypium hirsutum HOM05D005487 ORTHO05D007280 7.6e-21 105.9 55 85.5
COL.COLO4_27266 Corchorus olitorius HOM05D000025 ORTHO05D000040 2.9e-20 104.0 136 44.1
BcaC08g44100 Brassica carinata HOM05D005487 ORTHO05D027150 3.2e-19 100.5 69 68.1
BolC9t55424H Brassica oleracea HOM05D005487 ORTHO05D027150 7.9e-18 95.9 66 69.7
BcaC04g21976 Brassica carinata HOM05D005487 ORTHO05D027150 5.1e-17 93.2 66 68.2
C09p25260 Brassica napus HOM05D005487 ORTHO05D027150 7.4e-16 89.4 66 65.2
SEGI_21127 Sequoiadendron giganteum HOM05D000023 ORTHO05D000014 1.4e-09 68.6 68 50.0
MCO13G238 Micromonas commoda HOM05D004309 ORTHO05D005588 2.2e-07 61.2 175 28.6
TAR381G0287 Trochodendron aralioides HOM05D005487 ORTHO05D415274 2.8e-07 60.8 37 70.3
Pp3c6_20080 Physcomitrium patens HOM05D004309 ORTHO05D005588 6.9e-06 56.2 121 30.6
PRCOL_00000256 Prasinoderma coloniale HOM05D004309 ORTHO05D005588 9.1e-06 55.8 196 27.6


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