Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.09G065300 Manihot esculenta HOM05D007534 ORTHO05D009540 1.2e-146 523.1 263 100.0
Duzib093G0985 Durio zibethinus HOM05D007534 ORTHO05D009540 9.4e-102 374.0 264 75.4
Thecc.05G068400 Theobroma cacao HOM05D007534 ORTHO05D009540 2.1e-101 372.9 263 75.3
vmacro08785 Vaccinium macrocarpon HOM05D007534 ORTHO05D009540 4.4e-99 365.2 263 73.4
Atru.chr8.1788 Acer truncatum HOM05D007534 ORTHO05D009540 1.3e-98 363.6 269 72.9
COL.COLO4_26947 Corchorus olitorius HOM05D007534 ORTHO05D009540 1.7e-98 363.2 268 72.8
Gohir.D01G204300 Gossypium hirsutum HOM05D007534 ORTHO05D009540 1.7e-98 363.2 265 72.1
Cpa.g.sc102.24 Carica papaya HOM05D007534 ORTHO05D009540 3.7e-98 362.1 266 72.6
TAR369G0058 Trochodendron aralioides HOM05D007534 ORTHO05D009540 8.2e-98 360.9 263 73.0
TWI53G0173 Tripterygium wilfordii HOM05D007534 ORTHO05D009540 1.1e-97 360.5 264 75.0
Gorai.002G246500 Gossypium raimondii HOM05D007534 ORTHO05D009540 4.1e-97 358.6 266 71.8
Oeu005026.1 Olea europaea HOM05D007534 ORTHO05D009540 9.1e-97 357.5 281 70.1
Sabra16G0099100 Salix brachista HOM05D007534 ORTHO05D009540 1.5e-96 356.7 263 72.6
Dinv37321 Davidia involucrata HOM05D001037 ORTHO05D000888 4.5e-96 355.1 266 72.9
Gohir.A01G213100 Gossypium hirsutum HOM05D007534 ORTHO05D009540 5.9e-96 354.8 264 70.5
SalBow3G3627 Salvia bowleyana HOM05D007534 ORTHO05D009540 1.0e-95 354.0 264 71.6
MSTRG.19184 Avicennia marina HOM05D007534 ORTHO05D009540 1.3e-95 353.6 264 72.3
ClCG04G009370 Citrullus lanatus HOM05D007534 ORTHO05D009540 1.7e-95 353.2 253 73.5
Potri.016G098900 Populus trichocarpa HOM05D007534 ORTHO05D009540 2.2e-95 352.8 261 70.5
CAN.G900.25 Capsicum annuum HOM05D007534 ORTHO05D009540 8.5e-95 350.9 215 81.4
QL07p043071 Quercus lobata HOM05D007534 ORTHO05D009540 8.5e-95 350.9 262 70.2
Nn2g13809 Nelumbo nucifera HOM05D007534 ORTHO05D009540 1.4e-94 350.1 266 71.1
CANSAT80G0853 Cannabis sativa HOM05D007534 ORTHO05D009540 5.5e-94 348.2 265 68.7
Eucgr.A01668 Eucalyptus grandis HOM05D007534 ORTHO05D009540 5.5e-94 348.2 270 70.0
THA.LOC104807064 Tarenaya hassleriana HOM05D007534 ORTHO05D009540 5.5e-94 348.2 251 73.3
Sc20g0005570 Simmondsia chinensis HOM05D007534 ORTHO05D009540 3.6e-93 345.5 214 80.4
GSVIVG01033650001 Vitis vinifera HOM05D007534 ORTHO05D009540 7.9e-93 344.4 183 90.7
Solyc09g008270.3 Solanum lycopersicum HOM05D007534 ORTHO05D009540 1.4e-92 343.6 178 92.1
Sopen09g003090 Solanum pennellii HOM05D007534 ORTHO05D009540 1.4e-92 343.6 178 92.1
PGSC0003DMG400003865 Solanum tuberosum HOM05D007534 ORTHO05D009540 3.9e-92 342.0 258 70.2
MELO3C024472.2 Cucumis melo HOM05D007534 ORTHO05D009540 1.5e-91 340.1 253 72.7
CsaV3_6G039950 Cucumis sativus L. HOM05D007534 ORTHO05D009540 3.3e-91 339.0 263 70.3
SGA_v2.0_scaffold75G24837 Striga asiatica HOM05D007534 ORTHO05D009540 5.7e-91 338.2 270 70.0
Migut.J00648 Erythranthe guttata HOM05D007534 ORTHO05D009540 7.4e-91 337.8 265 71.3
HanXRQChr13g0400981 Helianthus annuus HOM05D007534 ORTHO05D009540 7.4e-91 337.8 265 69.1
arahy.Tifrunner.gnm1.ann1.39JB5J Arachis hypogaea HOM05D007534 ORTHO05D009540 1.3e-90 337.0 267 68.5
arahy.Tifrunner.gnm1.ann1.C885SU Arachis hypogaea HOM05D007534 ORTHO05D009540 1.3e-90 337.0 267 68.5
Rhsim04G0144000 Rhododendron simsii HOM05D007534 ORTHO05D009540 2.8e-90 335.9 305 64.3
Nitab4.5_0000578g0110 Nicotiana tabacum HOM05D007534 ORTHO05D009540 8.2e-90 334.3 266 68.8
Prupe.7G128600 Prunus persica HOM05D007534 ORTHO05D009540 3.1e-89 332.4 269 68.0
Lj2A120T45 Lonicera japonica HOM05D007534 ORTHO05D009540 7.0e-89 331.3 289 64.4
BraA05t19860Z Brassica rapa HOM05D007534 ORTHO05D009540 9.1e-89 330.9 258 68.6
CiPaw.10G129000 Carya illinoinensis HOM05D007534 ORTHO05D009540 2.0e-88 329.7 190 83.2
Lsat_1_v5_gn_6_24941 Lactuca sativa HOM05D007534 ORTHO05D009540 2.0e-88 329.7 246 68.7
Ciclev10012507m.g Citrus clementina HOM05D007534 ORTHO05D009540 3.5e-88 328.9 261 68.2
Sed0017969 Sechium edule HOM05D007534 ORTHO05D009540 4.5e-88 328.6 263 67.7
Carub.0004s1873 Capsella rubella HOM05D007534 ORTHO05D009540 5.9e-88 328.2 263 66.9
BolC4t22757H Brassica oleracea HOM05D007534 ORTHO05D009540 2.9e-87 325.9 256 68.8
Haze_20525 Corylus avellana HOM05D007534 ORTHO05D009540 5.0e-87 325.1 267 65.9
BcaC02g11812 Brassica carinata HOM05D007534 ORTHO05D009540 8.5e-87 324.3 263 68.1
A05p08980 Brassica napus HOM05D007534 ORTHO05D009540 1.1e-86 323.9 258 68.2
C04p11090 Brassica napus HOM05D007534 ORTHO05D009540 1.1e-86 323.9 264 66.7
RcHm_v2.0_Chr3g0470401 Rosa chinensis HOM05D007534 ORTHO05D009540 1.1e-86 323.9 263 66.5
AUR62042063 Chenopodium quinoa HOM05D007534 ORTHO05D009540 1.9e-86 323.2 260 66.2
Aqoxy1G01139 Aquilegia oxysepala HOM05D007534 ORTHO05D009540 7.2e-86 321.2 251 66.1
BcaB02g09324 Brassica carinata HOM05D007534 ORTHO05D009540 7.2e-86 321.2 264 66.7
CARHR131340 Cardamine hirsuta HOM05D007534 ORTHO05D009540 7.2e-86 321.2 265 65.7
Lalb_Chr06g0171761 Lupinus albus HOM05D007534 ORTHO05D009540 2.7e-85 319.3 267 67.4
AL4G33100 Arabidopsis lyrata HOM05D007534 ORTHO05D009540 4.7e-85 318.5 265 65.3
Glyma.13G141700 Glycine max HOM05D007534 ORTHO05D009540 8.0e-85 317.8 179 85.5
Medtr1g063070 Medicago truncatula HOM05D007534 ORTHO05D009540 8.0e-85 317.8 187 82.9
AT2G36885 Arabidopsis thaliana HOM05D007534 ORTHO05D009540 1.8e-84 316.6 265 64.2
Cfa017628 Carpinus fangiana HOM05D007534 ORTHO05D009540 6.7e-84 314.7 263 66.5
Cc06_g04320 Coffea canephora HOM05D007534 ORTHO05D009540 8.8e-84 314.3 263 66.2
Phvul.007G147900 Phaseolus vulgaris HOM05D007534 ORTHO05D009540 1.2e-83 313.9 223 72.6
PSO266G0073 Papaver somniferum HOM05D007534 ORTHO05D009540 2.0e-83 313.2 278 61.9
Ca_28252_v3 Cicer arietinum L. HOM05D007534 ORTHO05D009540 1.3e-82 310.5 177 85.3
Lj5g0014413 Lotus japonicus HOM05D007534 ORTHO05D009540 1.7e-82 310.1 177 84.2
ECA233G2496 Erigeron canadensis HOM05D007534 ORTHO05D009540 4.8e-82 308.5 179 82.1
Psat6g074600 Pisum sativum HOM05D007534 ORTHO05D009540 4.8e-82 308.5 246 67.1
Actinidia32489 Actinidia chinensis HOM05D007534 ORTHO05D009540 2.4e-81 306.2 198 78.3
Zm00001eb003080 Zea mays HOM05D007534 ORTHO05D009540 3.1e-81 305.8 228 68.0
MD12G1110000 Malus domestica HOM05D007534 ORTHO05D009540 5.3e-81 305.1 278 62.9
Os03g0137600 Oryza sativa ssp. japonica HOM05D007534 ORTHO05D009540 7.0e-81 304.7 177 81.4
Aa31LG5G22110 Aethionema arabicum HOM05D007534 ORTHO05D009540 1.2e-77 293.9 258 62.8
Nitab4.5_0008624g0030 Nicotiana tabacum HOM05D007534 ORTHO05D009540 1.6e-77 293.5 267 62.2
CDE09G0108 Ceratophyllum demersum HOM05D007534 ORTHO05D009540 3.0e-76 289.3 200 71.0
Thhalv10017130m.g Eutrema salsugineum HOM05D007534 ORTHO05D009540 5.2e-76 288.5 221 67.9
Hma1.2p1_0205F.1_g086900 Hydrangea macrophylla HOM05D007534 ORTHO05D009540 6.8e-76 288.1 231 70.1
ATR0723G005 Amborella trichopoda HOM05D007534 ORTHO05D009540 4.4e-75 285.4 263 58.6
Sp4g19170 Schrenkiella parvula HOM05D007534 ORTHO05D009540 1.3e-74 283.9 265 60.4
Peaxi162Scf00847g00032 Petunia axillaris HOM05D007534 ORTHO05D009540 2.8e-74 282.7 267 60.7
Ah.15g092560 Amaranthus hybridus HOM05D007534 ORTHO05D009540 3.5e-72 275.8 258 58.9
Pp3c2_17450 Physcomitrium patens HOM05D007534 ORTHO05D009540 4.7e-69 265.4 176 72.2
EL10Ac7g16645 Beta vulgaris HOM05D007534 ORTHO05D009540 1.4e-68 263.8 260 56.2
CSS0046236 Camellia sinensis var. sinensis HOM05D007534 ORTHO05D009540 3.0e-68 262.7 214 68.7
Mapoly0049s0045 Marchantia polymorpha HOM05D007534 ORTHO05D009540 2.2e-66 256.5 175 70.3
AagrBONN_evm.TU.Sc2ySwM_117.1862 Anthoceros agrestis HOM05D007534 ORTHO05D009540 7.0e-65 251.5 172 72.1
PGR004G0787 Punica granatum HOM05D007534 ORTHO05D009540 6.8e-60 235.0 197 66.5
Hma1.2p1_0828F.1_g225100 Hydrangea macrophylla HOM05D007534 ORTHO05D009540 2.0e-59 233.4 130 86.9
TPR.G11259 Trifolium pratense HOM05D007534 ORTHO05D009540 7.5e-59 231.5 123 90.2
unitig_22.g5100 Utricularia gibba HOM05D007534 ORTHO05D009540 9.5e-54 214.5 117 85.5
QL03p002371 Quercus lobata HOM05D007534 ORTHO05D009540 3.6e-53 212.6 175 65.1
AUR62026915 Chenopodium quinoa HOM05D007534 ORTHO05D009540 2.1e-45 186.8 144 66.7
Cre02.g143450 Chlamydomonas reinhardtii HOM05D007534 ORTHO05D009540 6.2e-45 185.3 183 54.6
FAN15G1333 Fragaria x ananassa HOM05D007534 ORTHO05D009540 4.1e-41 172.6 94 84.0
MD04G1092000 Malus domestica HOM05D007534 ORTHO05D009540 2.6e-35 153.3 129 63.6
CSS0001990 Camellia sinensis var. sinensis HOM05D007534 ORTHO05D012079 3.5e-32 142.9 75 90.7
ATR0680G419 Amborella trichopoda HOM05D007534 ORTHO05D009540 1.7e-26 124.0 65 87.7
Rhsim04G0142700 Rhododendron simsii HOM05D007534 ORTHO05D009540 5.3e-20 102.4 58 84.5
MD04G1092200 Malus domestica HOM05D007534 ORTHO05D009540 1.3e-15 87.8 98 53.1


User provided reference genes

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