Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.09G062812 Manihot esculenta HOM05D013024 ORTHO05D015548 7.9e-88 327.0 158 100.0
Cpa.g.sc199.5 Carica papaya HOM05D013024 ORTHO05D015548 1.5e-25 120.2 144 43.1
Thecc.09G156200 Theobroma cacao HOM05D013024 ORTHO05D015548 2.5e-25 119.4 139 46.8
Thecc.09G156700 Theobroma cacao HOM05D013024 ORTHO05D015548 7.3e-25 117.9 139 46.0
Thecc.09G157300 Theobroma cacao HOM05D013024 ORTHO05D015548 2.8e-24 115.9 139 45.3
CANSAT11G2620 Cannabis sativa HOM05D013024 ORTHO05D015548 2.4e-20 102.8 162 42.6
CANSAT21G1445 Cannabis sativa HOM05D013024 ORTHO05D015548 3.5e-19 99.0 133 41.4
Nn2g12179 Nelumbo nucifera HOM05D002727 ORTHO05D002856 3.6e-16 89.0 165 38.8
Actinidia02639 Actinidia chinensis HOM05D002727 ORTHO05D002856 6.8e-15 84.7 135 37.8
Nn8g39635 Nelumbo nucifera HOM05D002727 ORTHO05D002856 1.2e-14 84.0 138 38.4
Nn2g12178 Nelumbo nucifera HOM05D002727 ORTHO05D002856 2.0e-14 83.2 138 37.7
Nn2g12182 Nelumbo nucifera HOM05D002727 ORTHO05D002856 5.8e-14 81.6 112 42.9
Nn8g40185 Nelumbo nucifera HOM05D002727 ORTHO05D002856 5.8e-14 81.6 157 36.3
Rhsim01G0019500 Rhododendron simsii HOM05D002727 ORTHO05D002856 2.2e-13 79.7 136 39.0
Nn8g39630 Nelumbo nucifera HOM05D002727 ORTHO05D002856 3.7e-13 79.0 138 37.7
Nn8g40139 Nelumbo nucifera HOM05D002727 ORTHO05D002856 4.9e-13 78.6 138 36.2
Rhsim01G0018600 Rhododendron simsii HOM05D002727 ORTHO05D002856 6.4e-13 78.2 104 46.2
Haze_14633 Corylus avellana HOM05D013024 ORTHO05D015548 8.3e-13 77.8 100 46.0
Thecc.09G157200 Theobroma cacao HOM05D013024 ORTHO05D015548 8.3e-13 77.8 144 37.5
Rhsim01G0018300 Rhododendron simsii HOM05D002727 ORTHO05D002856 1.4e-12 77.0 137 39.4
Dinv42800 Davidia involucrata HOM05D002727 ORTHO05D002856 1.9e-12 76.6 136 36.8
Dinv42803 Davidia involucrata HOM05D002727 ORTHO05D002856 1.9e-12 76.6 136 36.8
Dinv43298 Davidia involucrata HOM05D002727 ORTHO05D002856 1.9e-12 76.6 136 36.8
Dinv43301 Davidia involucrata HOM05D002727 ORTHO05D002856 1.9e-12 76.6 136 36.8
Aqoxy4G00886 Aquilegia oxysepala HOM05D002727 ORTHO05D002856 2.4e-12 76.3 136 38.2
Nn8g40141 Nelumbo nucifera HOM05D002727 ORTHO05D002856 3.2e-12 75.9 138 36.2
GSVIVG01023712001 Vitis vinifera HOM05D002727 ORTHO05D002856 4.1e-12 75.5 134 38.1
Rhsim01G0020200 Rhododendron simsii HOM05D002727 ORTHO05D002856 5.4e-12 75.1 137 38.7
QL02p098200 Quercus lobata HOM05D002727 ORTHO05D002856 7.1e-12 74.7 108 41.7
Aqoxy4G00561 Aquilegia oxysepala HOM05D002727 ORTHO05D002856 9.2e-12 74.3 136 35.3
Aqoxy3G02264 Aquilegia oxysepala HOM05D002727 ORTHO05D002856 1.6e-11 73.6 128 39.8
Thecc.09G156600 Theobroma cacao HOM05D013024 ORTHO05D015548 2.7e-11 72.8 144 35.4
Aqoxy4G00571 Aquilegia oxysepala HOM05D002727 ORTHO05D002856 4.6e-11 72.0 105 39.0
Thecc.09G156100 Theobroma cacao HOM05D013024 ORTHO05D015548 4.6e-11 72.0 144 34.7
Thecc.09G156800 Theobroma cacao HOM05D013024 ORTHO05D015548 4.6e-11 72.0 144 34.7
Prupe.1G100500 Prunus persica HOM05D002727 ORTHO05D002856 7.8e-11 71.2 137 35.0
Nn8g40140 Nelumbo nucifera HOM05D002727 ORTHO05D002856 1.3e-10 70.5 138 33.3
MD03G1035100 Malus domestica HOM05D002727 ORTHO05D002856 8.6e-10 67.8 136 34.6
Rhsim01G0017200 Rhododendron simsii HOM05D002727 ORTHO05D002856 9.5e-09 64.3 40 65.0
Rhsim01G0018500 Rhododendron simsii HOM05D002727 ORTHO05D002856 9.5e-09 64.3 40 65.0
MD03G1107500 Malus domestica HOM05D002727 ORTHO05D002856 6.2e-08 61.6 111 33.3
Rhsim01G0020900 Rhododendron simsii HOM05D002727 ORTHO05D002856 6.2e-08 61.6 137 32.1
FvH4_4g32150 Fragaria vesca HOM05D002727 ORTHO05D002856 1.1e-07 60.8 111 38.7
FAN22G0940 Fragaria x ananassa HOM05D002727 ORTHO05D002856 1.1e-07 60.8 111 38.7
Prupe.1G100600 Prunus persica HOM05D002727 ORTHO05D002856 1.4e-07 60.5 111 33.3
RcHm_v2.0_Chr4g0440841 Rosa chinensis HOM05D002727 ORTHO05D002856 1.4e-07 60.5 113 38.1
FAN12G1004 Fragaria x ananassa HOM05D002727 ORTHO05D002856 1.8e-07 60.1 111 37.8
MD15G1046300 Malus domestica HOM05D002727 ORTHO05D002856 4.0e-07 58.9 136 27.2
FAN07G1376 Fragaria x ananassa HOM05D002727 ORTHO05D002856 3.4e-06 55.8 111 36.9
Hma1.2p1_0114F.1_g055280 Hydrangea macrophylla HOM05D002727 ORTHO05D002856 5.8e-06 55.1 111 30.6
MD13G1028200 Malus domestica HOM05D002727 ORTHO05D002856 5.8e-06 55.1 114 35.1
DCAR_007283 Daucus carota HOM05D002727 ORTHO05D002856 7.6e-06 54.7 101 31.7
PGR102G0802 Punica granatum HOM05D002727 ORTHO05D002856 7.6e-06 54.7 106 32.1
ECA232G4731 Erigeron canadensis HOM05D002727 ORTHO05D002856 9.9e-06 54.3 109 32.1
Nn3g16463 Nelumbo nucifera HOM05D002727 ORTHO05D002856 9.9e-06 54.3 109 30.3
PGR119G0434 Punica granatum HOM05D002727 ORTHO05D002856 9.9e-06 54.3 104 32.7


User provided reference genes

Program Settings