Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.09G049502 Manihot esculenta HOM05D008196 ORTHO05D010261 3.2e-56 221.5 107 100.0
Cfa016460 Carpinus fangiana HOM05D008196 ORTHO05D010261 1.2e-31 139.8 104 61.5
GSVIVG01033695001 Vitis vinifera HOM05D008196 ORTHO05D010261 1.3e-30 136.3 104 60.6
Haze_19461 Corylus avellana HOM05D008196 ORTHO05D010261 3.6e-28 128.3 129 50.4
Hma1.2p1_0547F.1_g176400 Hydrangea macrophylla HOM05D008196 ORTHO05D010261 3.6e-28 128.3 103 61.2
CSS0018510 Camellia sinensis var. sinensis HOM05D008196 ORTHO05D010261 5.3e-27 124.4 103 54.4
Atru.chr8.1725_Atru.chr8.1735 Acer truncatum HOM05D008196 ORTHO05D010261 2.2e-25 119.0 104 57.7
Dinv35820 Davidia involucrata HOM05D008196 ORTHO05D010261 3.8e-25 118.2 103 54.4
Duzib106G1531 Durio zibethinus HOM05D008196 ORTHO05D010261 6.4e-25 117.5 105 54.3
TWI74G1102 Tripterygium wilfordii HOM05D008196 ORTHO05D010261 1.9e-24 115.9 104 53.8
TAR636G2455 Trochodendron aralioides HOM05D008196 ORTHO05D010261 7.1e-24 114.0 92 57.6
Gohir.D04G108000 Gossypium hirsutum HOM05D008196 ORTHO05D010261 9.3e-24 113.6 105 52.4
Gorai.009G412100 Gossypium raimondii HOM05D008196 ORTHO05D010261 9.3e-24 113.6 105 52.4
Gohir.A04G069600 Gossypium hirsutum HOM05D008196 ORTHO05D010261 2.1e-23 112.5 105 51.4
Dinv37347 Davidia involucrata HOM05D008196 ORTHO05D010261 6.0e-23 110.9 96 55.2
CiPaw.10G001900 Carya illinoinensis HOM05D008196 ORTHO05D010261 1.0e-22 110.2 102 53.9
QL07p041760 Quercus lobata HOM05D008196 ORTHO05D010261 1.3e-20 103.2 96 58.3
Nn6g35204 Nelumbo nucifera HOM05D008196 ORTHO05D010261 1.6e-20 102.8 90 51.1
Medtr7g102410 Medicago truncatula HOM05D008196 ORTHO05D010261 8.1e-20 100.5 104 54.8
Ca_08927_v3 Cicer arietinum L. HOM05D008196 ORTHO05D010261 1.4e-19 99.8 104 53.8
Lalb_Chr21g0315171 Lupinus albus HOM05D008196 ORTHO05D010261 1.4e-19 99.8 82 61.0
Ca_08867_v3 Cicer arietinum L. HOM05D008196 ORTHO05D010261 3.1e-19 98.6 104 53.8
Aqoxy1G01072 Aquilegia oxysepala HOM05D008196 ORTHO05D010261 1.5e-18 96.3 101 45.5
Lj1g0021041 Lotus japonicus HOM05D008196 ORTHO05D010261 1.5e-18 96.3 103 53.4
arahy.Tifrunner.gnm1.ann1.A0NJYH Arachis hypogaea HOM05D008196 ORTHO05D010261 2.0e-18 95.9 103 52.4
Glyma.03G186700 Glycine max HOM05D008196 ORTHO05D010261 2.6e-18 95.5 105 51.4
Psat3g040360 Pisum sativum HOM05D008196 ORTHO05D010261 2.6e-18 95.5 104 51.9
Phvul.001G181700 Phaseolus vulgaris HOM05D008196 ORTHO05D010261 9.9e-18 93.6 105 49.5
Glyma.19G186800 Glycine max HOM05D008196 ORTHO05D010261 3.8e-17 91.7 105 49.5
VMungo1383G2144 Vigna mungo HOM05D008196 ORTHO05D010261 4.2e-16 88.2 103 47.6
PSO063G4707 Papaver somniferum HOM05D008196 ORTHO05D010261 1.6e-15 86.3 101 43.6
TAR633G2803 Trochodendron aralioides HOM05D008196 ORTHO05D010261 1.6e-15 86.3 96 50.0
TPR.G8704 Trifolium pratense HOM05D008196 ORTHO05D010261 1.0e-14 83.6 104 48.1
arahy.Tifrunner.gnm1.ann1.PXX6WP Arachis hypogaea HOM05D008196 ORTHO05D010261 3.0e-14 82.0 116 44.8
Thecc.05G073000 Theobroma cacao HOM05D008196 ORTHO05D010261 1.5e-13 79.7 104 39.4
HanXRQChr13g0400671 Helianthus annuus HOM05D008196 ORTHO05D010261 9.6e-13 77.0 103 40.8
CDE06G1684 Ceratophyllum demersum HOM05D008196 ORTHO05D010261 1.6e-12 76.3 102 39.2
COL.COLO4_26896 Corchorus olitorius HOM05D008196 ORTHO05D011585 2.8e-12 75.5 105 43.8
PSO339G1434 Papaver somniferum HOM05D008196 ORTHO05D010261 2.8e-12 75.5 100 39.0
CDE03G0205 Ceratophyllum demersum HOM05D008196 ORTHO05D010261 3.7e-12 75.1 102 37.3
SMO367G1035 Selaginella moellendorffii HOM05D008196 ORTHO05D010261 3.8e-09 65.1 75 38.7
SEGI_09514 Sequoiadendron giganteum HOM05D008012 ORTHO05D010154 5.1e-06 54.7 92 32.6


User provided reference genes

Program Settings