Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.09G049300 Manihot esculenta HOM05D008222 ORTHO05D010364 0.0e+00 1327.4 696 100.0
Potri.006G205800 Populus trichocarpa HOM05D008222 ORTHO05D010364 5.8e-175 618.6 695 55.5
Sabra06G0158800 Salix brachista HOM05D008222 ORTHO05D010364 8.9e-168 594.7 695 54.4
Atru.chr8.1411 Acer truncatum HOM05D008222 ORTHO05D010364 2.6e-151 540.0 744 47.0
Haze_19673 Corylus avellana HOM05D008222 ORTHO05D010364 3.2e-149 533.1 699 50.4
Ciclev10011213m.g Citrus clementina HOM05D008222 ORTHO05D010364 7.4e-146 521.9 696 50.3
Cfa016663 Carpinus fangiana HOM05D008222 ORTHO05D010364 7.6e-143 511.9 698 47.4
Dinv31739 Davidia involucrata HOM05D008222 ORTHO05D010364 1.7e-142 510.8 700 48.3
QL07p037571 Quercus lobata HOM05D008222 ORTHO05D010364 1.0e-139 501.5 699 48.2
COL.COLO4_29620 Corchorus olitorius HOM05D008222 ORTHO05D010364 1.4e-136 491.1 698 47.4
Thecc.05G099900 Theobroma cacao HOM05D008222 ORTHO05D010364 2.4e-136 490.3 699 47.5
TAR633G2678 Trochodendron aralioides HOM05D008222 ORTHO05D010364 1.1e-130 471.5 707 46.0
Cpa.g.sc104.69 Carica papaya HOM05D008222 ORTHO05D010364 2.9e-126 456.8 709 45.3
CiPaw.10G014900 Carya illinoinensis HOM05D008222 ORTHO05D010364 6.5e-126 455.7 698 46.4
TWI77G0950 Tripterygium wilfordii HOM05D008222 ORTHO05D010364 1.4e-115 421.4 709 43.3
TAR636G2750 Trochodendron aralioides HOM05D008222 ORTHO05D010364 6.3e-113 412.5 700 42.1
CSS0016714 Camellia sinensis var. sinensis HOM05D008222 ORTHO05D010364 2.6e-111 407.1 720 44.0
GSVIVG01033924001 Vitis vinifera HOM05D008222 ORTHO05D010364 2.6e-111 407.1 698 41.3
Nn6g34773 Nelumbo nucifera HOM05D008222 ORTHO05D010364 4.4e-106 389.8 703 41.8
Lj1C1035T2 Lonicera japonica HOM05D008222 ORTHO05D010364 2.6e-98 364.0 714 39.1
Glyma.02G200000 Glycine max HOM05D008222 ORTHO05D010364 2.2e-97 360.9 696 41.1
CANSAT64G2035 Cannabis sativa HOM05D008222 ORTHO05D010364 5.0e-94 349.7 761 38.2
Lj5g0010690 Lotus japonicus HOM05D008222 ORTHO05D010364 8.0e-92 342.4 699 41.2
FvH4_6g19810 Fragaria vesca HOM05D008222 ORTHO05D010364 1.4e-91 341.7 701 40.4
RcHm_v2.0_Chr3g0475181 Rosa chinensis HOM05D008222 ORTHO05D010364 3.0e-91 340.5 695 40.1
CiPaw.09G018200 Carya illinoinensis HOM05D008222 ORTHO05D010364 1.2e-90 338.6 571 43.4
FAN05G0526 Fragaria x ananassa HOM05D008222 ORTHO05D010364 1.2e-90 338.6 703 39.7
FAN14G0765 Fragaria x ananassa HOM05D008222 ORTHO05D010364 1.5e-90 338.2 701 40.2
Oeu010753.1 Olea europaea HOM05D008222 ORTHO05D010364 9.8e-90 335.5 705 37.0
FAN02G2041 Fragaria x ananassa HOM05D008222 ORTHO05D010364 3.7e-89 333.6 708 39.4
Glyma.10G076700 Glycine max HOM05D008222 ORTHO05D010364 6.3e-89 332.8 694 40.5
Oeu010756.1 Olea europaea HOM05D008222 ORTHO05D010364 2.4e-88 330.9 704 36.6
FAN05G0780 Fragaria x ananassa HOM05D008222 ORTHO05D010364 2.0e-87 327.8 701 39.7
FAN09G4126 Fragaria x ananassa HOM05D008222 ORTHO05D010364 1.1e-85 322.0 701 38.9
VMungo0720G0042 Vigna mungo HOM05D008222 ORTHO05D010364 2.5e-85 320.9 694 37.0
DCAR_020725 Daucus carota HOM05D008222 ORTHO05D010364 3.3e-85 320.5 701 35.7
Phvul.007G270200 Phaseolus vulgaris HOM05D008222 ORTHO05D010364 5.5e-85 319.7 693 37.8
Oeu060355.1 Olea europaea HOM05D008222 ORTHO05D010364 6.3e-81 306.2 711 35.9
MD12G1033800 Malus domestica HOM05D008222 ORTHO05D010364 1.2e-79 302.0 607 39.4
TPR.G8743 Trifolium pratense HOM05D008222 ORTHO05D010364 1.5e-77 295.0 699 36.3
MSTRG.10386 Avicennia marina HOM05D008222 ORTHO05D010364 3.3e-77 293.9 703 37.0
MBI17_g16777_MAGBIO Magnolia biondii HOM05D008222 ORTHO05D010364 1.0e-75 288.9 719 37.1
Medtr1g058110 Medicago truncatula HOM05D008222 ORTHO05D010364 4.6e-71 273.5 700 37.1
Hund03869 Selenicereus undatus HOM05D008222 ORTHO05D010364 6.2e-68 263.1 791 33.0
AUR62006264 Chenopodium quinoa HOM05D008222 ORTHO05D010364 1.4e-64 251.9 735 30.2
Sc20g0006580 Simmondsia chinensis HOM05D008222 ORTHO05D010364 2.5e-61 241.1 697 34.6
EL10Ac7g16820 Beta vulgaris HOM05D008222 ORTHO05D010364 1.6e-60 238.4 803 30.8
AUR62028514 Chenopodium quinoa HOM05D008222 ORTHO05D010364 2.3e-59 234.6 818 31.2
Aqoxy4G02694 Aquilegia oxysepala HOM05D008222 ORTHO05D010364 6.8e-59 233.0 726 32.2
Oeu010754.1 Olea europaea HOM05D008222 ORTHO05D010364 6.8e-51 206.5 536 33.8
HPP92_009786 Vanilla planifolia HOM05D008222 ORTHO05D010364 5.8e-50 203.4 698 31.4
SGA_v2.0_scaffold184G40000 Striga asiatica HOM05D008222 ORTHO05D010364 5.1e-46 190.3 707 28.9
CDE08G0440 Ceratophyllum demersum HOM05D008222 ORTHO05D010364 3.3e-45 187.6 697 31.1
CDE06G1815 Ceratophyllum demersum HOM05D008222 ORTHO05D010364 7.3e-45 186.4 691 30.0
ATR0772G019 Amborella trichopoda HOM05D008222 ORTHO05D010364 1.1e-37 162.5 720 29.7
SEGI_05246 Sequoiadendron giganteum HOM05D008222 ORTHO05D010364 1.4e-35 155.6 771 26.5
Os02g0536400 Oryza sativa ssp. japonica HOM05D008222 ORTHO05D010364 4.5e-34 150.6 722 27.7
ECA233G4923 Erigeron canadensis HOM05D008222 ORTHO05D010364 4.3e-29 134.0 737 29.3
unitig_8.g3557 Utricularia gibba HOM05D008222 ORTHO05D010364 6.5e-25 120.2 253 30.8
Lalb_Chr02g0154681 Lupinus albus HOM05D008222 ORTHO05D010364 6.9e-19 100.1 209 38.3
Sabra16G0076100 Salix brachista HOM05D008222 ORTHO05D010364 4.1e-11 74.3 169 34.3
AagrBONN_evm.TU.Sc2ySwM_368.1895 Anthoceros agrestis HOM05D008222 ORTHO05D010364 4.5e-10 70.9 53 56.6
TPR.G36918 Trifolium pratense HOM05D002912 ORTHO05D003191 1.4e-06 59.3 84 42.9
Oeu017707.1 Olea europaea HOM05D008222 ORTHO05D010364 3.9e-06 57.8 72 47.2
A03p20610 Brassica napus HOM05D002912 ORTHO05D003191 8.8e-06 56.6 72 43.1
C03p24210 Brassica napus HOM05D002912 ORTHO05D003191 8.8e-06 56.6 72 43.1
BolC3t14815H Brassica oleracea HOM05D002912 ORTHO05D003191 8.8e-06 56.6 72 43.1
BraA03t11303Z Brassica rapa HOM05D002912 ORTHO05D003191 8.8e-06 56.6 72 43.1
Thhalv10017989m.g Eutrema salsugineum HOM05D002912 ORTHO05D003191 8.8e-06 56.6 72 43.1
Sp4g19660 Schrenkiella parvula HOM05D002912 ORTHO05D003191 8.8e-06 56.6 72 43.1


User provided reference genes

Program Settings