Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.09G048600 Manihot esculenta HOM05D006689 ORTHO05D008349 2.3e-128 462.2 232 100.0
Potri.016G072700 Populus trichocarpa HOM05D006689 ORTHO05D008349 1.8e-88 329.7 222 74.3
CSS0035173 Camellia sinensis var. sinensis HOM05D006689 ORTHO05D008349 1.2e-84 317.0 231 65.8
GSVIVG01033928001 Vitis vinifera HOM05D006689 ORTHO05D008349 3.5e-84 315.5 220 69.1
TWI74G1155 Tripterygium wilfordii HOM05D006689 ORTHO05D008349 4.6e-84 315.1 230 67.8
TAR633G1471 Trochodendron aralioides HOM05D006689 ORTHO05D008349 4.6e-84 315.1 230 66.5
Prupe.7G098300 Prunus persica HOM05D006689 ORTHO05D008349 5.9e-84 314.7 229 67.7
Lalb_Chr01g0017911 Lupinus albus HOM05D006689 ORTHO05D008349 1.7e-83 313.2 218 67.9
Lalb_Chr20g0111471 Lupinus albus HOM05D006689 ORTHO05D008349 1.7e-83 313.2 228 66.7
QL07p037513 Quercus lobata HOM05D006689 ORTHO05D008349 3.0e-83 312.4 220 66.4
FvH4_6g19910 Fragaria vesca HOM05D006689 ORTHO05D008349 5.0e-83 311.6 223 64.6
MD14G1035800 Malus domestica HOM05D006689 ORTHO05D008349 6.6e-83 311.2 227 65.2
PGR004G2039 Punica granatum HOM05D006689 ORTHO05D008349 1.1e-82 310.5 215 68.8
QL07p037495 Quercus lobata HOM05D006689 ORTHO05D008349 7.3e-82 307.8 220 66.4
Hma1.2p1_0064F.1_g034840 Hydrangea macrophylla HOM05D006689 ORTHO05D008349 9.5e-82 307.4 215 67.4
Atru.chr8.1397 Acer truncatum HOM05D006689 ORTHO05D008349 2.8e-81 305.8 230 64.3
Eucgr.A02606 Eucalyptus grandis HOM05D006689 ORTHO05D008349 6.2e-81 304.7 215 66.5
CiPaw.09G018700 Carya illinoinensis HOM05D006689 ORTHO05D008349 1.4e-80 303.5 220 66.4
Lj1g0003895 Lotus japonicus HOM05D006689 ORTHO05D008349 2.3e-80 302.8 231 62.8
Psat3g030240 Pisum sativum HOM05D006689 ORTHO05D008349 1.2e-79 300.4 231 61.0
CARHR086170 Cardamine hirsuta HOM05D006689 ORTHO05D008349 1.3e-78 297.0 220 66.8
C03p45070 Brassica napus HOM05D006689 ORTHO05D008349 1.7e-78 296.6 231 63.2
Aa31LG3G5030 Aethionema arabicum HOM05D006689 ORTHO05D008349 2.2e-78 296.2 220 65.5
BcaB04g18654 Brassica carinata HOM05D006689 ORTHO05D008349 3.7e-78 295.4 231 63.2
Cfa016668 Carpinus fangiana HOM05D006689 ORTHO05D008349 3.7e-78 295.4 225 64.0
Phvul.001G194040 Phaseolus vulgaris HOM05D006689 ORTHO05D008349 3.7e-78 295.4 231 61.9
Thhalv10021180m.g Eutrema salsugineum HOM05D006689 ORTHO05D008349 6.4e-78 294.7 231 64.1
Sc07g0005680 Simmondsia chinensis HOM05D006689 ORTHO05D008349 8.3e-78 294.3 229 61.1
A03p37220 Brassica napus HOM05D006689 ORTHO05D008349 1.1e-77 293.9 231 63.2
TPR.G23318 Trifolium pratense HOM05D006689 ORTHO05D008349 1.1e-77 293.9 215 64.2
Actinidia32058 Actinidia chinensis HOM05D006689 ORTHO05D008349 2.4e-77 292.7 231 61.9
BcaC01g04099 Brassica carinata HOM05D006689 ORTHO05D008349 5.4e-77 291.6 215 65.6
Sp3g09850 Schrenkiella parvula HOM05D006689 ORTHO05D008349 5.4e-77 291.6 222 64.0
Aqoxy4G02685 Aquilegia oxysepala HOM05D006689 ORTHO05D008349 7.0e-77 291.2 230 61.7
AL3G23170 Arabidopsis lyrata HOM05D006689 ORTHO05D008349 9.2e-77 290.8 231 63.2
Duzib106G1273 Durio zibethinus HOM05D006689 ORTHO05D008349 9.2e-77 290.8 230 60.0
BraA03t12881Z Brassica rapa HOM05D006689 ORTHO05D008349 1.2e-76 290.4 221 64.7
CsaV3_6G040970 Cucumis sativus L. HOM05D006689 ORTHO05D008349 1.0e-75 287.3 219 62.1
C05p56320 Brassica napus HOM05D006689 ORTHO05D008349 3.9e-75 285.4 222 63.5
AT3G11620 Arabidopsis thaliana HOM05D006689 ORTHO05D008349 5.0e-75 285.0 205 67.3
Nn6g34760 Nelumbo nucifera HOM05D006689 ORTHO05D008349 5.0e-75 285.0 230 60.0
Cc06_g06350 Coffea canephora HOM05D006689 ORTHO05D008349 8.6e-75 284.3 231 57.6
A05p37720 Brassica napus HOM05D006689 ORTHO05D008349 1.1e-74 283.9 222 63.1
CANSAT64G2446 Cannabis sativa HOM05D006689 ORTHO05D008349 1.5e-74 283.5 215 62.8
Sopen01g003330 Solanum pennellii HOM05D006689 ORTHO05D008349 1.5e-74 283.5 231 61.0
BraA05t22567Z Brassica rapa HOM05D006689 ORTHO05D008349 2.5e-74 282.7 222 62.2
Carub.0003s1094 Capsella rubella HOM05D006689 ORTHO05D008349 2.5e-74 282.7 220 62.7
FAN14G3242 Fragaria x ananassa HOM05D006689 ORTHO05D008349 4.3e-74 282.0 223 60.5
Hma1.2p1_0064F.1_g034850 Hydrangea macrophylla HOM05D006689 ORTHO05D008349 1.2e-73 280.4 197 67.5
Solyc01g007790.4 Solanum lycopersicum HOM05D006689 ORTHO05D008349 2.1e-73 279.6 231 60.6
BolC5t34296H Brassica oleracea HOM05D006689 ORTHO05D008349 3.6e-73 278.9 205 66.3
PSO384G4437 Papaver somniferum HOM05D006689 ORTHO05D008349 4.7e-73 278.5 219 58.9
FAN05G0890 Fragaria x ananassa HOM05D006689 ORTHO05D008349 6.2e-73 278.1 223 60.1
Cpa.g.sc104.62 Carica papaya HOM05D006689 ORTHO05D008349 1.1e-72 277.3 228 59.2
PSO339G4581 Papaver somniferum HOM05D006689 ORTHO05D008349 1.8e-72 276.6 219 58.9
FAN05G1672 Fragaria x ananassa HOM05D006689 ORTHO05D008349 5.2e-72 275.0 223 59.6
ATR0772G132 Amborella trichopoda HOM05D006689 ORTHO05D008349 1.5e-71 273.5 224 58.9
FAN02G4476 Fragaria x ananassa HOM05D006689 ORTHO05D008349 1.5e-71 273.5 223 58.7
MD12G1034600 Malus domestica HOM05D006689 ORTHO05D008349 4.4e-71 271.9 208 63.5
Oeu017715.1 Olea europaea HOM05D006689 ORTHO05D008349 5.8e-71 271.6 214 61.2
BcaB06g25602 Brassica carinata HOM05D006689 ORTHO05D008349 1.3e-70 270.4 235 60.0
Thecc.05G100700 Theobroma cacao HOM05D006689 ORTHO05D008349 2.2e-70 269.6 216 59.7
HanXRQChr13g0398201 Helianthus annuus HOM05D006689 ORTHO05D008349 3.7e-70 268.9 215 56.3
Zm00001eb362600 Zea mays HOM05D006689 ORTHO05D008349 5.4e-69 265.0 228 57.5
DCAR_013430 Daucus carota HOM05D006689 ORTHO05D008349 7.1e-69 264.6 234 56.8
Gorai.009G398000 Gossypium raimondii HOM05D006689 ORTHO05D008349 2.1e-68 263.1 222 56.8
BcaC05g29349 Brassica carinata HOM05D006689 ORTHO05D008349 6.6e-67 258.1 203 63.1
Ciclev10011965m.g Citrus clementina HOM05D006689 ORTHO05D008349 2.1e-65 253.1 245 51.8
ECA233G1524 Erigeron canadensis HOM05D006689 ORTHO05D008349 2.4e-64 249.6 208 54.3
arahy.Tifrunner.gnm1.ann1.YAPI8V Arachis hypogaea HOM05D006689 ORTHO05D008349 2.6e-63 246.1 214 57.0
HPP92_023075 Vanilla planifolia HOM05D006689 ORTHO05D008349 2.2e-62 243.0 214 55.1
FAN09G0196 Fragaria x ananassa HOM05D006689 ORTHO05D008349 1.4e-61 240.4 315 42.5
Sed0011891 Sechium edule HOM05D006689 ORTHO05D008349 7.1e-61 238.0 183 61.2
ClCG04G010350 Citrullus lanatus HOM05D006689 ORTHO05D008349 4.6e-60 235.3 214 55.1
MBI17_g00993_MAGBIO Magnolia biondii HOM05D006689 ORTHO05D008349 6.0e-60 235.0 231 50.2
Peaxi162Scf00419g00069 Petunia axillaris HOM05D006689 ORTHO05D008349 7.8e-60 234.6 231 54.5
Haze_19679 Corylus avellana HOM05D006689 ORTHO05D008349 2.3e-59 233.0 263 49.4
Rhsim03G0067100 Rhododendron simsii HOM05D006689 ORTHO05D008349 3.9e-59 232.3 367 37.9
Lsat_1_v5_gn_6_35180 Lactuca sativa HOM05D006689 ORTHO05D008349 5.1e-59 231.9 191 56.0
Nitab4.5_0000665g0040 Nicotiana tabacum HOM05D006689 ORTHO05D008349 6.6e-59 231.5 231 52.8
SEGI_26711 Sequoiadendron giganteum HOM05D006689 ORTHO05D008349 2.5e-58 229.6 215 51.2
arahy.Tifrunner.gnm1.ann1.ZIE5B9 Arachis hypogaea HOM05D006689 ORTHO05D008349 9.0e-56 221.1 198 56.1
RcHm_v2.0_Chr3g0475311 Rosa chinensis HOM05D006689 ORTHO05D008349 5.8e-55 218.4 160 63.8
Sabra16G0075500 Salix brachista HOM05D006689 ORTHO05D008349 1.3e-54 217.2 261 52.1
Medtr7g105800 Medicago truncatula HOM05D006689 ORTHO05D008349 8.4e-54 214.5 164 61.6
Pp3c13_7330 Physcomitrium patens HOM05D006689 ORTHO05D008349 1.7e-51 206.8 216 45.8
Migut.L01819 Erythranthe guttata HOM05D006689 ORTHO05D008349 3.3e-50 202.6 159 59.1
SMO272G0021 Selaginella moellendorffii HOM05D006689 ORTHO05D008349 3.3e-50 202.6 207 48.8
SMO165G0131 Selaginella moellendorffii HOM05D006689 ORTHO05D008349 5.3e-48 195.3 200 48.5
vmacro07460 Vaccinium macrocarpon HOM05D006689 ORTHO05D008349 4.5e-47 192.2 416 33.2
Gohir.D04G095300 Gossypium hirsutum HOM05D006689 ORTHO05D008349 2.2e-46 189.9 171 55.6
Nitab4.5_0000020g0370 Nicotiana tabacum HOM05D006689 ORTHO05D008349 2.5e-42 176.4 157 54.8
Gohir.A04G061585 Gossypium hirsutum HOM05D006689 ORTHO05D008349 8.1e-41 171.4 128 58.6
SalBow5G2063 Salvia bowleyana HOM05D006689 ORTHO05D008349 9.0e-40 167.9 215 44.2
Hund19873 Selenicereus undatus HOM05D006689 ORTHO05D008349 1.4e-37 160.6 251 40.2
CAN.G574.36 Capsicum annuum HOM05D006689 ORTHO05D008349 1.8e-35 153.7 132 56.8
CDE02G1185 Ceratophyllum demersum HOM05D006689 ORTHO05D008349 7.6e-31 138.3 89 67.4
Actinidia03903 Actinidia chinensis HOM05D006689 ORTHO05D008349 1.4e-29 134.0 140 52.9
Glyma.19G197900 Glycine max HOM05D006689 ORTHO05D008349 1.2e-28 131.0 94 64.9
AUR62037035 Chenopodium quinoa HOM05D006689 ORTHO05D008349 5.0e-22 109.0 101 54.5
MELO3C024575.2 Cucumis melo HOM05D006689 ORTHO05D008349 2.7e-20 103.2 228 35.1
MCO04G525 Micromonas commoda HOM05D006689 ORTHO05D008349 7.9e-20 101.7 209 30.6
AUR62006266 Chenopodium quinoa HOM05D006689 ORTHO05D008349 1.8e-19 100.5 101 53.5
RcHm_v2.0_Chr3g0475321 Rosa chinensis HOM05D006689 ORTHO05D008349 6.7e-19 98.6 68 64.7
Cre09.g388319 Chlamydomonas reinhardtii HOM05D006689 ORTHO05D008349 1.7e-17 94.0 117 41.9
unitig_22.g6018 Utricularia gibba HOM05D006689 ORTHO05D008349 2.2e-17 93.6 169 33.1
CDE02G4301 Ceratophyllum demersum HOM05D006689 ORTHO05D008349 3.7e-17 92.8 97 51.5
PRCOL_00001274 Prasinoderma coloniale HOM05D006689 ORTHO05D008349 6.3e-17 92.0 212 30.7
Glyma.03G200300 Glycine max HOM05D006689 ORTHO05D008349 5.9e-15 85.5 67 61.2
PGSC0003DMG400016416 Solanum tuberosum HOM05D006689 ORTHO05D008349 7.2e-13 78.6 67 58.2
Cfa021542 Carpinus fangiana HOM05D000750 ORTHO05D011662 7.9e-12 75.1 62 62.9
EL10Ac7g16816 Beta vulgaris HOM05D006689 ORTHO05D008349 3.0e-11 73.2 66 54.5
arahy.Tifrunner.gnm1.ann1.HW4B1R Arachis hypogaea HOM05D006689 ORTHO05D008349 5.0e-06 55.8 36 61.1
BolC3t16769H Brassica oleracea HOM05D006689 ORTHO05D008349 5.0e-06 55.8 48 54.2


User provided reference genes

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