Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.09G038550 Manihot esculenta HOM05D000216 ORTHO05D004083 2.1e-59 232.3 123 100.0
Sed0023443 Sechium edule HOM05D000216 ORTHO05D004083 1.4e-12 76.6 64 70.3
CSS0029618 Camellia sinensis var. sinensis HOM05D000216 ORTHO05D004083 1.9e-12 76.3 69 66.7
MELO3C028037.2 Cucumis melo HOM05D000216 ORTHO05D004083 2.5e-12 75.9 64 71.9
MELO3C034728.2 Cucumis melo HOM05D000216 ORTHO05D004083 2.5e-12 75.9 64 71.9
Medtr4g051097 Medicago truncatula HOM05D000216 ORTHO05D004083 2.5e-12 75.9 64 70.3
Psat1g099200 Pisum sativum HOM05D000216 ORTHO05D004083 2.5e-12 75.9 64 70.3
Psat5g134720 Pisum sativum HOM05D000216 ORTHO05D004083 2.5e-12 75.9 64 70.3
Psat7g033720 Pisum sativum HOM05D000216 ORTHO05D004083 2.5e-12 75.9 64 70.3
Aa31csc39G180 Aethionema arabicum HOM05D000216 ORTHO05D004083 3.2e-12 75.5 64 70.3
AL2G20960 Arabidopsis lyrata HOM05D000216 ORTHO05D004083 3.2e-12 75.5 64 70.3
ATCG00140 Arabidopsis thaliana HOM05D000216 ORTHO05D004083 3.2e-12 75.5 64 70.3
BcaC05g28803 Brassica carinata HOM05D000216 ORTHO05D004083 3.2e-12 75.5 64 70.3
BNapus_Darmor_BZH_scaffold_253p00030 Brassica napus HOM05D000216 ORTHO05D004083 3.2e-12 75.5 64 70.3
BolC2t10573H Brassica oleracea HOM05D000216 ORTHO05D004083 3.2e-12 75.5 64 70.3
BolSC29t60570H Brassica oleracea HOM05D000216 ORTHO05D004083 3.2e-12 75.5 64 70.3
BolSC37t60771H Brassica oleracea HOM05D000216 ORTHO05D004083 3.2e-12 75.5 64 70.3
BolSC44t60845H Brassica oleracea HOM05D000216 ORTHO05D004083 3.2e-12 75.5 64 70.3
BolSC45t60879H Brassica oleracea HOM05D000216 ORTHO05D004083 3.2e-12 75.5 64 70.3
BolSC46t60984H Brassica oleracea HOM05D000216 ORTHO05D004083 3.2e-12 75.5 64 70.3
BraSC143t45678Z Brassica rapa HOM05D000216 ORTHO05D004083 3.2e-12 75.5 64 70.3
BraSC151t45692Z Brassica rapa HOM05D000216 ORTHO05D004083 3.2e-12 75.5 64 70.3
CAN.G1167.13 Capsicum annuum HOM05D000216 ORTHO05D004083 3.2e-12 75.5 64 70.3
CAN.G1167.14 Capsicum annuum HOM05D000216 ORTHO05D004083 3.2e-12 75.5 64 70.3
CARHR281890 Cardamine hirsuta HOM05D000216 ORTHO05D004083 3.2e-12 75.5 64 70.3
COL.COLO4_00534 Corchorus olitorius HOM05D000216 ORTHO05D004083 3.2e-12 75.5 64 70.3
DCAR_032471 Daucus carota HOM05D000216 ORTHO05D004083 3.2e-12 75.5 64 70.3
Migut.D01336 Erythranthe guttata HOM05D000216 ORTHO05D004083 3.2e-12 75.5 64 70.3
HanXRQChr00c0601g0576501 Helianthus annuus HOM05D000216 ORTHO05D004083 3.2e-12 75.5 64 70.3
HanXRQChr08g0210211 Helianthus annuus HOM05D000216 ORTHO05D004083 3.2e-12 75.5 64 70.3
HanXRQChr11g0326641 Helianthus annuus HOM05D000216 ORTHO05D004083 3.2e-12 75.5 64 70.3
HanXRQChr13g0415491 Helianthus annuus HOM05D000216 ORTHO05D004083 3.2e-12 75.5 64 70.3
HanXRQCPg0579831 Helianthus annuus HOM05D000216 ORTHO05D004083 3.2e-12 75.5 64 70.3
Hma1.2p1_0414F.1_g147695 Hydrangea macrophylla HOM05D000216 ORTHO05D004083 3.2e-12 75.5 64 70.3
Lalb_Chr00c31g0408381 Lupinus albus HOM05D000216 ORTHO05D004083 3.2e-12 75.5 64 70.3
Lalb_Chr08g0232631 Lupinus albus HOM05D000216 ORTHO05D004083 3.2e-12 75.5 64 70.3
Oeu015531.1 Olea europaea HOM05D000216 ORTHO05D004083 3.2e-12 75.5 64 70.3
Oeu037367.1 Olea europaea HOM05D000216 ORTHO05D004083 3.2e-12 75.5 64 70.3
PSO548G0075 Papaver somniferum HOM05D000216 ORTHO05D004083 3.2e-12 75.5 64 70.3
Peaxi162Scf00081g00173 Petunia axillaris HOM05D000216 ORTHO05D004083 3.2e-12 75.5 64 70.3
Peaxi162Scf00379g00086 Petunia axillaris HOM05D000216 ORTHO05D004083 3.2e-12 75.5 64 70.3
Potri.013G138490 Populus trichocarpa HOM05D000216 ORTHO05D004083 3.2e-12 75.5 64 70.3
Potri.019G028500 Populus trichocarpa HOM05D000216 ORTHO05D004083 3.2e-12 75.5 64 70.3
PGR111G0043 Punica granatum HOM05D000216 ORTHO05D004083 3.2e-12 75.5 64 70.3
RcHm_v2.0_CPg0502441 Rosa chinensis HOM05D000216 ORTHO05D004083 3.2e-12 75.5 64 70.3
SabraPtG0000900 Salix brachista HOM05D000216 ORTHO05D004083 3.2e-12 75.5 64 70.3
Sed0011722 Sechium edule HOM05D000216 ORTHO05D004083 3.2e-12 75.5 64 70.3
Sed0017572 Sechium edule HOM05D000216 ORTHO05D004083 3.2e-12 75.5 64 70.3
Sed0017719 Sechium edule HOM05D000216 ORTHO05D004083 3.2e-12 75.5 64 70.3
TWI34G0859 Tripterygium wilfordii HOM05D000216 ORTHO05D004083 3.2e-12 75.5 64 70.3
unitig_91.g26493 Utricularia gibba HOM05D000216 ORTHO05D004083 3.2e-12 75.5 64 70.3
AUR62043346 Chenopodium quinoa HOM05D000216 ORTHO05D004083 4.2e-12 75.1 64 70.3
BolC6t36193H Brassica oleracea HOM05D000216 ORTHO05D004083 5.5e-12 74.7 64 67.2
Gohir.A01G140039 Gossypium hirsutum HOM05D000216 ORTHO05D004083 5.5e-12 74.7 64 70.3
Hund19315 Selenicereus undatus HOM05D000216 ORTHO05D000634 5.5e-12 74.7 64 70.3
Hund23974 Selenicereus undatus HOM05D000216 ORTHO05D000634 5.5e-12 74.7 64 70.3
Hund27453 Selenicereus undatus HOM05D000216 ORTHO05D000634 5.5e-12 74.7 64 70.3
Hund27641 Selenicereus undatus HOM05D000216 ORTHO05D000634 5.5e-12 74.7 64 70.3
Hund27671 Selenicereus undatus HOM05D000216 ORTHO05D000634 5.5e-12 74.7 64 70.3
Hund27698 Selenicereus undatus HOM05D000216 ORTHO05D000634 5.5e-12 74.7 64 70.3
Hund27743 Selenicereus undatus HOM05D000216 ORTHO05D000634 5.5e-12 74.7 64 70.3
Hund27765 Selenicereus undatus HOM05D000216 ORTHO05D000634 5.5e-12 74.7 64 70.3
Hund27806 Selenicereus undatus HOM05D000216 ORTHO05D000634 5.5e-12 74.7 64 70.3
Hund27823 Selenicereus undatus HOM05D000216 ORTHO05D000634 5.5e-12 74.7 64 70.3
Hund27839 Selenicereus undatus HOM05D000216 ORTHO05D000634 5.5e-12 74.7 64 70.3
Hund27930 Selenicereus undatus HOM05D000216 ORTHO05D000634 5.5e-12 74.7 64 70.3
Hund27945 Selenicereus undatus HOM05D000216 ORTHO05D000634 5.5e-12 74.7 64 70.3
Hund28017 Selenicereus undatus HOM05D000216 ORTHO05D000634 5.5e-12 74.7 64 70.3
Hund28059 Selenicereus undatus HOM05D000216 ORTHO05D000634 5.5e-12 74.7 64 70.3
Hund28084 Selenicereus undatus HOM05D000216 ORTHO05D000634 5.5e-12 74.7 64 70.3
Hund28124 Selenicereus undatus HOM05D000216 ORTHO05D000634 5.5e-12 74.7 64 70.3
Hund28130 Selenicereus undatus HOM05D000216 ORTHO05D000634 5.5e-12 74.7 64 70.3
Hund28141 Selenicereus undatus HOM05D000216 ORTHO05D000634 5.5e-12 74.7 64 70.3
Hund28162 Selenicereus undatus HOM05D000216 ORTHO05D000634 5.5e-12 74.7 64 70.3
Hund28188 Selenicereus undatus HOM05D000216 ORTHO05D000634 5.5e-12 74.7 64 70.3
Hund28209 Selenicereus undatus HOM05D000216 ORTHO05D000634 5.5e-12 74.7 64 70.3
Hund28236 Selenicereus undatus HOM05D000216 ORTHO05D000634 5.5e-12 74.7 64 70.3
Hund28259 Selenicereus undatus HOM05D000216 ORTHO05D000634 5.5e-12 74.7 64 70.3
Hund28351 Selenicereus undatus HOM05D000216 ORTHO05D001131 5.5e-12 74.7 64 70.3
Hund28352 Selenicereus undatus HOM05D000216 ORTHO05D000634 5.5e-12 74.7 64 70.3
Hund28373 Selenicereus undatus HOM05D000216 ORTHO05D000634 5.5e-12 74.7 64 70.3
Hund28399 Selenicereus undatus HOM05D000216 ORTHO05D000634 5.5e-12 74.7 64 70.3
Hund28414 Selenicereus undatus HOM05D000216 ORTHO05D000634 5.5e-12 74.7 64 70.3
Hund28501 Selenicereus undatus HOM05D000216 ORTHO05D000634 5.5e-12 74.7 64 70.3
Hund28687 Selenicereus undatus HOM05D000216 ORTHO05D000634 5.5e-12 74.7 64 70.3
Hund28703 Selenicereus undatus HOM05D000216 ORTHO05D000634 5.5e-12 74.7 64 70.3
Hund28807 Selenicereus undatus HOM05D000216 ORTHO05D000634 5.5e-12 74.7 64 70.3
Hund28825 Selenicereus undatus HOM05D000216 ORTHO05D000634 5.5e-12 74.7 64 70.3
Hund28834 Selenicereus undatus HOM05D000216 ORTHO05D000634 5.5e-12 74.7 64 70.3
Hund28905 Selenicereus undatus HOM05D000216 ORTHO05D000634 5.5e-12 74.7 64 70.3
Hund28985 Selenicereus undatus HOM05D000216 ORTHO05D000634 5.5e-12 74.7 64 70.3
Hund29114 Selenicereus undatus HOM05D000216 ORTHO05D000634 5.5e-12 74.7 64 70.3
Hund29198 Selenicereus undatus HOM05D000216 ORTHO05D000634 5.5e-12 74.7 64 70.3
Hund29479 Selenicereus undatus HOM05D000216 ORTHO05D000634 5.5e-12 74.7 64 70.3
Hund29776 Selenicereus undatus HOM05D000216 ORTHO05D000634 5.5e-12 74.7 64 70.3
Hund31369 Selenicereus undatus HOM05D000216 ORTHO05D004083 5.5e-12 74.7 64 70.3
Hund31430 Selenicereus undatus HOM05D000216 ORTHO05D004083 5.5e-12 74.7 64 70.3
Solyc09g059660.1 Solanum lycopersicum HOM05D000216 ORTHO05D004083 7.2e-12 74.3 65 69.2
AUR62012106 Chenopodium quinoa HOM05D000216 ORTHO05D004083 9.4e-12 73.9 64 68.8
MD15G1134000 Malus domestica HOM05D000216 ORTHO05D004083 9.4e-12 73.9 64 68.8
Psat0s2754g0040 Pisum sativum HOM05D000216 ORTHO05D004083 9.4e-12 73.9 64 67.2
Psat0s5083g0040 Pisum sativum HOM05D000216 ORTHO05D004083 9.4e-12 73.9 64 68.8
Solyc08g028860.1 Solanum lycopersicum HOM05D000216 ORTHO05D004083 1.2e-11 73.6 64 68.8
Sed0022034 Sechium edule HOM05D000216 ORTHO05D003638 2.1e-11 72.8 64 67.2
Atru.chr6.501 Acer truncatum HOM05D000216 ORTHO05D004083 2.7e-11 72.4 64 65.6
Cpa.g.sc10.246 Carica papaya HOM05D000216 ORTHO05D004083 2.7e-11 72.4 64 68.8
Gohir.D10G206400 Gossypium hirsutum HOM05D000216 ORTHO05D004083 2.7e-11 72.4 64 64.1
CAN.G612.4 Capsicum annuum HOM05D000216 ORTHO05D004083 6.1e-11 71.2 64 67.2
CAN.G939.11 Capsicum annuum HOM05D000216 ORTHO05D004083 6.1e-11 71.2 115 44.3
Gorai.002G196100 Gossypium raimondii HOM05D000216 ORTHO05D004083 6.1e-11 71.2 64 68.8
Solyc10g044550.1 Solanum lycopersicum HOM05D000216 ORTHO05D004083 6.1e-11 71.2 64 67.2
Lalb_Chr09g0335331 Lupinus albus HOM05D000216 ORTHO05D004083 1.0e-10 70.5 64 67.2
CAN.G877.3 Capsicum annuum HOM05D000216 ORTHO05D004083 1.8e-10 69.7 64 64.1
Nitab4.5_0000619g0110 Nicotiana tabacum HOM05D000216 ORTHO05D004083 1.8e-10 69.7 64 65.6
Glyma.06G229000 Glycine max HOM05D000216 ORTHO05D004083 3.0e-10 68.9 70 60.0
Lalb_Chr00c45g0412721 Lupinus albus HOM05D000216 ORTHO05D004083 3.0e-10 68.9 64 67.2
Migut.D01411 Erythranthe guttata HOM05D000216 ORTHO05D004083 3.9e-10 68.6 71 62.0
Sed0021232 Sechium edule HOM05D000216 ORTHO05D004083 5.1e-10 68.2 60 68.3
Gohir.D08G103700 Gossypium hirsutum HOM05D000216 ORTHO05D004083 6.7e-10 67.8 64 64.1
Gorai.011G232000 Gossypium raimondii HOM05D000216 ORTHO05D004083 8.8e-10 67.4 64 64.1
Lsat_1_v5_gn_1_38660 Lactuca sativa HOM05D000216 ORTHO05D004083 8.8e-10 67.4 58 69.0
Gohir.D10G139200 Gossypium hirsutum HOM05D000216 ORTHO05D004083 1.5e-09 66.6 71 57.7
Gorai.011G172900 Gossypium raimondii HOM05D000216 ORTHO05D004083 1.5e-09 66.6 64 62.5
Phvul.005G066100 Phaseolus vulgaris HOM05D000216 ORTHO05D004083 1.5e-09 66.6 64 62.5
Gorai.004G111200 Gossypium raimondii HOM05D000216 ORTHO05D004083 2.6e-09 65.9 64 60.9
Psat0s1586g0120 Pisum sativum HOM05D000216 ORTHO05D003638 3.3e-09 65.5 57 64.9
Psat0s2754g0200 Pisum sativum HOM05D000743 ORTHO05D000580 3.3e-09 65.5 57 64.9
Psat1g003840 Pisum sativum HOM05D000743 ORTHO05D000580 3.3e-09 65.5 57 64.9
Psat6g219360 Pisum sativum HOM05D000743 ORTHO05D000580 3.3e-09 65.5 57 64.9
BcaC03g16701 Brassica carinata HOM05D000216 ORTHO05D004083 4.4e-09 65.1 61 63.9
Gorai.011G251200 Gossypium raimondii HOM05D000216 ORTHO05D004083 7.4e-09 64.3 63 63.5
ClCG10G016680 Citrullus lanatus HOM05D000216 ORTHO05D004083 9.7e-09 63.9 54 66.7
RcHm_v2.0_Chr4g0416071 Rosa chinensis HOM05D000216 ORTHO05D004083 9.7e-09 63.9 73 58.9
SMO086G0011 Selaginella moellendorffii HOM05D000216 ORTHO05D004083 9.7e-09 63.9 64 62.5
Gohir.D01G158000 Gossypium hirsutum HOM05D000216 ORTHO05D004083 1.3e-08 63.5 64 65.6
Lsat_1_v5_gn_4_83740 Lactuca sativa HOM05D000216 ORTHO05D004083 2.2e-08 62.8 70 55.7
Nitab4.5_0009256g0010 Nicotiana tabacum HOM05D000216 ORTHO05D004083 2.2e-08 62.8 64 62.5
Nn6g31741 Nelumbo nucifera HOM05D000216 ORTHO05D004083 2.8e-08 62.4 53 69.8
Sopen08g009640 Solanum pennellii HOM05D000216 ORTHO05D004083 2.8e-08 62.4 52 67.3
Manes.05G065650 Manihot esculenta HOM05D000216 ORTHO05D004083 3.7e-08 62.0 61 60.7
Gohir.D10G221700 Gossypium hirsutum HOM05D000216 ORTHO05D004083 4.8e-08 61.6 63 61.9
Peaxi162Scf00211g00234 Petunia axillaris HOM05D000216 ORTHO05D004083 2.4e-07 59.3 91 49.5
Psat0s2288g0080 Pisum sativum HOM05D000743 ORTHO05D000580 1.2e-06 57.0 57 57.9
Gohir.D10G154900 Gossypium hirsutum HOM05D000216 ORTHO05D004083 1.5e-06 56.6 51 66.7
LjContig00318g0027021 Lotus japonicus HOM05D000216 ORTHO05D004083 1.5e-06 56.6 64 60.9
LjContig00489g0003457 Lotus japonicus HOM05D000216 ORTHO05D004083 1.5e-06 56.6 64 60.9
Lsat_1_v5_gn_3_17381 Lactuca sativa HOM05D000216 ORTHO05D004083 4.5e-06 55.1 64 57.8
BraSC59t46516Z Brassica rapa HOM05D000216 ORTHO05D004083 7.7e-06 54.3 45 66.7
Glyma.19G109600 Glycine max HOM05D000216 ORTHO05D004083 7.7e-06 54.3 77 51.9
Gorai.011G099400 Gossypium raimondii HOM05D000216 ORTHO05D004083 7.7e-06 54.3 45 73.3


User provided reference genes

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