Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.09G036100 Manihot esculenta HOM05D008163 ORTHO05D010305 3.9e-70 268.1 141 100.0
Hma1.2p1_0136F.1_g062003 Hydrangea macrophylla HOM05D008163 ORTHO05D010305 2.3e-30 136.0 94 73.4
SalBow1G5351 Salvia bowleyana HOM05D008163 ORTHO05D010305 1.1e-29 133.7 94 73.4
SalBow1G7817 Salvia bowleyana HOM05D008163 ORTHO05D010305 1.1e-29 133.7 94 73.4
Actinidia29350 Actinidia chinensis HOM05D008163 ORTHO05D010305 1.9e-29 132.9 116 58.6
CSS0047821 Camellia sinensis var. sinensis HOM05D008163 ORTHO05D010305 1.9e-29 132.9 154 49.4
Prupe.7G030100 Prunus persica HOM05D008163 ORTHO05D010305 7.4e-29 131.0 98 68.4
MD15G1374400 Malus domestica HOM05D008163 ORTHO05D010305 9.7e-29 130.6 94 70.2
Prupe.4G282300 Prunus persica HOM05D008163 ORTHO05D010305 1.6e-28 129.8 98 68.4
MD12G1044600 Malus domestica HOM05D008163 ORTHO05D010305 2.2e-28 129.4 94 69.1
Potri.007G072900 Populus trichocarpa HOM05D008163 ORTHO05D010305 1.8e-27 126.3 92 70.7
Sabra07G0061500 Salix brachista HOM05D008163 ORTHO05D010305 2.6e-26 122.5 92 69.6
Solyc11g063600.3 Solanum lycopersicum HOM05D008163 ORTHO05D010305 2.6e-26 122.5 94 70.2
Sabra15G0022500 Salix brachista HOM05D008163 ORTHO05D010305 4.5e-26 121.7 92 68.5
Rhsim06G0223600 Rhododendron simsii HOM05D000504 ORTHO05D000403 2.2e-25 119.4 77 74.0
RcHm_v2.0_Chr1g0321141 Rosa chinensis HOM05D008163 ORTHO05D010305 3.8e-25 118.6 85 69.4
Os12g0517200 Oryza sativa ssp. japonica HOM05D008163 ORTHO05D010305 6.5e-25 117.9 115 56.5
ECA238G1787 Erigeron canadensis HOM05D003855 ORTHO05D004722 1.4e-24 116.7 104 61.5
FvH4_7g02510 Fragaria vesca HOM05D008163 ORTHO05D010305 1.4e-24 116.7 81 69.1
FAN03G0237 Fragaria x ananassa HOM05D008163 ORTHO05D010305 1.4e-24 116.7 81 69.1
FAN06G4466 Fragaria x ananassa HOM05D008163 ORTHO05D010305 1.4e-24 116.7 81 69.1
RcHm_v2.0_Chr2g0149911 Rosa chinensis HOM05D008163 ORTHO05D010305 1.9e-24 116.3 86 67.4
CSS0033547 Camellia sinensis var. sinensis HOM05D008163 ORTHO05D010305 4.2e-24 115.2 86 65.1
SHI03043 Sapria himalayana HOM05D008163 ORTHO05D010305 1.2e-23 113.6 85 62.4
Prupe.7G029400 Prunus persica HOM05D008163 ORTHO05D010305 1.6e-23 113.2 104 57.7
HanXRQChr07g0196921 Helianthus annuus HOM05D003855 ORTHO05D004722 1.8e-22 109.8 104 56.7
Thhalv10021368m.g Eutrema salsugineum HOM05D008163 ORTHO05D010305 3.9e-22 108.6 77 64.9
Aa31LG8G8870 Aethionema arabicum HOM05D008163 ORTHO05D010305 8.8e-22 107.5 77 62.3
AT3G22300 Arabidopsis thaliana HOM05D008163 ORTHO05D010305 1.1e-21 107.1 77 63.6
CARHR098200 Cardamine hirsuta HOM05D008163 ORTHO05D010305 7.4e-21 104.4 105 51.4
AL3G36570 Arabidopsis lyrata HOM05D008163 ORTHO05D010305 9.7e-21 104.0 105 50.5
BcaB06g26334 Brassica carinata HOM05D008163 ORTHO05D010305 9.7e-21 104.0 77 63.6
A05p26470 Brassica napus HOM05D008163 ORTHO05D010305 9.7e-21 104.0 77 63.6
BraA05t21520Z Brassica rapa HOM05D008163 ORTHO05D010305 9.7e-21 104.0 77 63.6
Hund21444 Selenicereus undatus HOM05D008163 ORTHO05D010305 9.7e-21 104.0 106 55.7
Zm00001eb215210 Zea mays HOM05D008163 ORTHO05D010305 9.7e-21 104.0 112 50.9
Sp3g20090 Schrenkiella parvula HOM05D008163 ORTHO05D010305 1.3e-20 103.6 85 60.0
Zm00001eb056700 Zea mays HOM05D008163 ORTHO05D010305 1.3e-20 103.6 110 52.7
Carub.0003s2247 Capsella rubella HOM05D008163 ORTHO05D010305 1.7e-20 103.2 109 48.6
BcaC01g03452 Brassica carinata HOM05D008163 ORTHO05D010305 2.2e-20 102.8 77 62.3
A03p42710 Brassica napus HOM05D008163 ORTHO05D010305 2.2e-20 102.8 77 62.3
C03p52430 Brassica napus HOM05D008163 ORTHO05D010305 2.2e-20 102.8 77 62.3
BolC3t17513H Brassica oleracea HOM05D008163 ORTHO05D010305 2.2e-20 102.8 77 62.3
BraA03t13418Z Brassica rapa HOM05D008163 ORTHO05D010305 2.2e-20 102.8 77 62.3
BcaC05g28083 Brassica carinata HOM05D008163 ORTHO05D010305 3.7e-20 102.1 77 62.3
C05p41060 Brassica napus HOM05D008163 ORTHO05D010305 3.7e-20 102.1 77 62.3
BolC5t32848H Brassica oleracea HOM05D008163 ORTHO05D010305 3.1e-19 99.0 114 47.4
EL10Ac8g20156 Beta vulgaris HOM05D008163 ORTHO05D010305 3.4e-18 95.5 68 66.2
AUR62012772 Chenopodium quinoa HOM05D008163 ORTHO05D010305 5.9e-18 94.7 77 61.0
AUR62021886 Chenopodium quinoa HOM05D008163 ORTHO05D010305 5.9e-18 94.7 77 61.0
Nn1g09991 Nelumbo nucifera HOM05D008163 ORTHO05D010305 1.0e-17 94.0 67 74.6
Nn1g10091 Nelumbo nucifera HOM05D008163 ORTHO05D010305 1.0e-17 94.0 67 74.6
SEGI_07019 Sequoiadendron giganteum HOM05D008163 ORTHO05D010305 1.0e-17 94.0 77 58.4
DCAR_027582 Daucus carota HOM05D008163 ORTHO05D010305 1.3e-17 93.6 77 55.8
PSO017G7110 Papaver somniferum HOM05D008163 ORTHO05D010305 1.7e-17 93.2 93 54.8
AUR62036216 Chenopodium quinoa HOM05D008163 ORTHO05D010305 6.5e-17 91.3 77 59.7
PSO170G4613 Papaver somniferum HOM05D008163 ORTHO05D010305 8.5e-17 90.9 132 44.7
TPR.G20554 Trifolium pratense HOM05D008163 ORTHO05D010305 8.5e-17 90.9 67 73.1
Lalb_Chr00c21g0405831 Lupinus albus HOM05D008163 ORTHO05D010305 1.9e-16 89.7 67 73.1
Nitab4.5_0001127g0310 Nicotiana tabacum HOM05D008163 ORTHO05D010305 2.5e-16 89.4 67 70.1
Nitab4.5_0000161g0030 Nicotiana tabacum HOM05D008163 ORTHO05D010305 3.2e-16 89.0 67 68.7
Ah.14g087810 Amaranthus hybridus HOM05D000967 ORTHO05D000796 1.4e-14 83.6 77 51.9
Nitab4.5_0000592g0150 Nicotiana tabacum HOM05D008163 ORTHO05D010305 2.3e-14 82.8 64 68.8
Nitab4.5_0000172g1360 Nicotiana tabacum HOM05D008163 ORTHO05D010305 1.1e-13 80.5 62 69.4
Pp3c3_3090 Physcomitrium patens HOM05D008163 ORTHO05D010305 8.2e-12 74.3 83 43.4
FAN10G0940 Fragaria x ananassa HOM05D008163 ORTHO05D010305 5.3e-11 71.6 53 66.0
AagrBONN_evm.TU.Sc2ySwM_368.972 Anthoceros agrestis HOM05D008163 ORTHO05D010305 4.5e-10 68.6 75 44.0
MD07G1062900 Malus domestica HOM05D008163 ORTHO05D010305 5.9e-10 68.2 51 64.7
Glyma.17G185500 Glycine max HOM05D008163 ORTHO05D010305 1.7e-09 66.6 52 69.2
SMO196G0141 Selaginella moellendorffii HOM05D008163 ORTHO05D010305 5.0e-09 65.1 77 41.6
SMO234G0032 Selaginella moellendorffii HOM05D008163 ORTHO05D010305 5.0e-09 65.1 77 41.6


User provided reference genes

Program Settings