Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.09G034800 Manihot esculenta HOM05D003436 ORTHO05D003674 2.2e-27 125.6 101 100.0
Manes.08G044900 Manihot esculenta HOM05D003436 ORTHO05D003674 9.1e-13 77.0 98 50.0
HanXRQChr10g0300671 Helianthus annuus HOM05D003436 ORTHO05D003674 3.2e-10 68.6 42 88.1
Lsat_1_v5_gn_9_26540 Lactuca sativa HOM05D003436 ORTHO05D003674 3.2e-10 68.6 42 85.7
Ciclev10012978m.g Citrus clementina HOM05D003436 ORTHO05D003674 2.7e-09 65.5 44 81.8
MSTRG.19903 Avicennia marina HOM05D003436 ORTHO05D003674 3.6e-09 65.1 93 47.3
Sed0015125 Sechium edule HOM05D003436 ORTHO05D003674 3.6e-09 65.1 44 79.5
Atru.chr8.1096 Acer truncatum HOM05D003436 ORTHO05D003674 6.1e-09 64.3 44 81.8
ECA247G3621 Erigeron canadensis HOM05D003436 ORTHO05D003674 6.1e-09 64.3 42 78.6
Cpa.g.sc85.72 Carica papaya HOM05D003436 ORTHO05D003674 1.4e-08 63.2 44 77.3
CDE06G2670 Ceratophyllum demersum HOM05D003436 ORTHO05D003674 1.4e-08 63.2 42 78.6
ClCG04G002110 Citrullus lanatus HOM05D003436 ORTHO05D003674 1.4e-08 63.2 44 75.0
Thecc.05G170800 Theobroma cacao HOM05D003436 ORTHO05D003674 1.4e-08 63.2 44 75.0
HanXRQChr05g0132881 Helianthus annuus HOM05D003436 ORTHO05D003674 1.8e-08 62.8 90 46.7
Peaxi162Scf00003g04336 Petunia axillaris HOM05D003436 ORTHO05D003674 2.3e-08 62.4 44 79.5
Nitab4.5_0001538g0030 Nicotiana tabacum HOM05D003436 ORTHO05D003674 4.0e-08 61.6 44 75.0
PSO017G1578 Papaver somniferum HOM05D003436 ORTHO05D003674 4.0e-08 61.6 42 73.8
PSO170G2585 Papaver somniferum HOM05D003436 ORTHO05D003674 4.0e-08 61.6 42 73.8
Peaxi162Scf00003g04347 Petunia axillaris HOM05D003436 ORTHO05D003674 4.0e-08 61.6 44 75.0
Potri.016G046350 Populus trichocarpa HOM05D003436 ORTHO05D003674 4.0e-08 61.6 44 75.0
Actinidia22034 Actinidia chinensis HOM05D003436 ORTHO05D003674 5.2e-08 61.2 42 78.6
Medtr7g093140 Medicago truncatula HOM05D003436 ORTHO05D003674 5.2e-08 61.2 43 74.4
PGSC0003DMG400011437 Solanum tuberosum HOM05D003436 ORTHO05D003674 6.7e-08 60.8 44 75.0
SGA_v2.0_scaffold105G30485 Striga asiatica HOM05D003436 ORTHO05D003674 6.7e-08 60.8 92 47.8
Medtr7g093160 Medicago truncatula HOM05D003436 ORTHO05D003674 8.8e-08 60.5 43 74.4
PSO339G4457 Papaver somniferum HOM05D003436 ORTHO05D003674 8.8e-08 60.5 42 71.4
Prupe.7G076400 Prunus persica HOM05D003436 ORTHO05D003674 8.8e-08 60.5 93 44.1
THA.LOC104826769 Tarenaya hassleriana HOM05D003436 ORTHO05D003674 8.8e-08 60.5 102 44.1
A10p29610 Brassica napus HOM05D003436 ORTHO05D003674 1.1e-07 60.1 44 70.5
C09p69990 Brassica napus HOM05D003436 ORTHO05D003674 1.1e-07 60.1 44 70.5
BolC9t59741H Brassica oleracea HOM05D003436 ORTHO05D003674 1.1e-07 60.1 44 70.5
BraA10t45003Z Brassica rapa HOM05D003436 ORTHO05D003674 1.1e-07 60.1 44 70.5
Nitab4.5_0000105g0070 Nicotiana tabacum HOM05D003436 ORTHO05D003674 1.1e-07 60.1 44 72.7
Nitab4.5_0000105g0110 Nicotiana tabacum HOM05D003436 ORTHO05D003674 1.1e-07 60.1 95 43.2
TWI77G0090 Tripterygium wilfordii HOM05D003436 ORTHO05D003674 1.1e-07 60.1 44 70.5
Aa31sc24G30 Aethionema arabicum HOM05D003436 ORTHO05D003674 1.5e-07 59.7 44 70.5
BcaC06g32544 Brassica carinata HOM05D003436 ORTHO05D003674 1.5e-07 59.7 44 70.5
Peaxi162Scf00003g04337 Petunia axillaris HOM05D003436 ORTHO05D003674 1.5e-07 59.7 95 43.2
Sed0019071 Sechium edule HOM05D003436 ORTHO05D003674 1.5e-07 59.7 44 72.7
FAN02G3232 Fragaria x ananassa HOM05D003436 ORTHO05D003674 2.0e-07 59.3 44 70.5
Glyma.03G144400 Glycine max HOM05D003436 ORTHO05D003674 2.0e-07 59.3 43 72.1
RcHm_v2.0_Chr3g0479771 Rosa chinensis HOM05D003436 ORTHO05D003674 2.0e-07 59.3 44 72.7
Eucgr.K01836 Eucalyptus grandis HOM05D003436 ORTHO05D003674 2.6e-07 58.9 85 47.1
Lalb_Chr04g0261031 Lupinus albus HOM05D003436 ORTHO05D003674 2.6e-07 58.9 44 68.2
Nn7g36015 Nelumbo nucifera HOM05D003436 ORTHO05D003674 2.6e-07 58.9 44 72.7
VMungo1383G0252 Vigna mungo HOM05D003436 ORTHO05D003674 2.6e-07 58.9 43 69.8
BcaB01g06002 Brassica carinata HOM05D003436 ORTHO05D003674 3.3e-07 58.5 44 68.2
BcaC06g32392 Brassica carinata HOM05D003436 ORTHO05D003674 3.3e-07 58.5 44 68.2
MELO3C008930.2 Cucumis melo HOM05D003436 ORTHO05D003674 3.3e-07 58.5 44 70.5
CsaV3_4G030630 Cucumis sativus L. HOM05D003436 ORTHO05D003674 3.3e-07 58.5 44 70.5
CsaV3_3G038880 Cucumis sativus L. HOM05D003436 ORTHO05D003674 4.4e-07 58.2 43 72.1
Migut.J01829 Erythranthe guttata HOM05D003436 ORTHO05D003674 4.4e-07 58.2 109 41.3
Psat0s797g0240 Pisum sativum HOM05D003436 ORTHO05D003674 4.4e-07 58.2 44 68.2
VMungo1383G0066 Vigna mungo HOM05D003436 ORTHO05D003674 4.4e-07 58.2 43 69.8
GSVIVG01033505001 Vitis vinifera HOM05D003436 ORTHO05D003674 4.4e-07 58.2 101 41.6
ATR0605G384 Amborella trichopoda HOM05D003436 ORTHO05D003674 7.5e-07 57.4 97 42.3
CAN.G1161.29 Capsicum annuum HOM05D003436 ORTHO05D003674 7.5e-07 57.4 44 70.5
Thhalv10014897m.g Eutrema salsugineum HOM05D003436 ORTHO05D003674 7.5e-07 57.4 44 68.2
MBI04_g14513_MAGBIO Magnolia biondii HOM05D003436 ORTHO05D003674 7.5e-07 57.4 42 71.4
Oeu033740.1 Olea europaea HOM05D003436 ORTHO05D003674 7.5e-07 57.4 92 45.7
Sabra16G0050300 Salix brachista HOM05D003436 ORTHO05D003674 7.5e-07 57.4 44 70.5
Sp6g36090 Schrenkiella parvula HOM05D003436 ORTHO05D003674 7.5e-07 57.4 44 65.9
TWI53G0478 Tripterygium wilfordii HOM05D003436 ORTHO05D003674 7.5e-07 57.4 95 42.1
ClCG10G017480 Citrullus lanatus HOM05D003436 ORTHO05D003674 9.7e-07 57.0 43 69.8
Dinv14294 Davidia involucrata HOM05D003436 ORTHO05D003674 9.7e-07 57.0 42 71.4
Lalb_Chr15g0078981 Lupinus albus HOM05D003436 ORTHO05D003674 9.7e-07 57.0 43 69.8
Nitab4.5_0008334g0040 Nicotiana tabacum HOM05D003436 ORTHO05D003674 9.7e-07 57.0 44 70.5
Sopen10g029380 Solanum pennellii HOM05D003436 ORTHO05D003674 9.7e-07 57.0 44 70.5
Medtr7g093170 Medicago truncatula HOM05D003436 ORTHO05D003674 1.3e-06 56.6 43 69.8
Sc19g0007020 Simmondsia chinensis HOM05D003436 ORTHO05D003674 1.3e-06 56.6 44 65.9
Aqoxy7G03903 Aquilegia oxysepala HOM05D003436 ORTHO05D003674 1.7e-06 56.2 44 68.2
AL6G16870 Arabidopsis lyrata HOM05D003436 ORTHO05D003674 1.7e-06 56.2 44 65.9
AT5G06760 Arabidopsis thaliana HOM05D003436 ORTHO05D003674 1.7e-06 56.2 44 65.9
CANSAT64G0020 Cannabis sativa HOM05D003436 ORTHO05D003674 1.7e-06 56.2 99 40.4
Carub.0006s0565 Capsella rubella HOM05D003436 ORTHO05D003674 1.7e-06 56.2 44 65.9
FvH4_6g22410 Fragaria vesca HOM05D003436 ORTHO05D003674 1.7e-06 56.2 44 65.9
FAN14G5712 Fragaria x ananassa HOM05D003436 ORTHO05D003674 1.7e-06 56.2 44 65.9
Glyma.19G147200 Glycine max HOM05D003436 ORTHO05D003674 1.7e-06 56.2 43 67.4
TPR.G27745 Trifolium pratense HOM05D003436 ORTHO05D003674 1.7e-06 56.2 44 65.9
Aqoxy2G03681 Aquilegia oxysepala HOM05D003436 ORTHO05D003674 2.2e-06 55.8 44 68.2
Aqoxy3G02738 Aquilegia oxysepala HOM05D003436 ORTHO05D003674 2.2e-06 55.8 44 68.2
Aqoxy6G00181 Aquilegia oxysepala HOM05D003436 ORTHO05D003674 2.2e-06 55.8 44 68.2
Aqoxy7G02037 Aquilegia oxysepala HOM05D003436 ORTHO05D003674 2.2e-06 55.8 44 68.2
C03p03280 Brassica napus HOM05D003436 ORTHO05D003674 2.2e-06 55.8 44 65.9
Ca_25707_v3 Cicer arietinum L. HOM05D003436 ORTHO05D003674 2.2e-06 55.8 44 63.6
COL.COLO4_33990 Corchorus olitorius HOM05D011887 ORTHO05D003674 2.2e-06 55.8 44 63.6
MELO3C009631.2 Cucumis melo HOM05D003436 ORTHO05D003674 2.2e-06 55.8 42 71.4
ECA236G0475 Erigeron canadensis HOM05D000402 ORTHO05D000263 2.2e-06 55.8 42 69.0
Nitab4.5_0000324g0100 Nicotiana tabacum HOM05D003436 ORTHO05D003674 2.2e-06 55.8 44 72.7
QL07p023622 Quercus lobata HOM05D003436 ORTHO05D003674 2.2e-06 55.8 42 69.0
CAN.G1161.31 Capsicum annuum HOM05D003436 ORTHO05D003674 2.8e-06 55.5 95 40.0
Medtr1g053970 Medicago truncatula HOM05D003436 ORTHO05D003674 2.8e-06 55.5 44 63.6
Nitab4.5_0000324g0070 Nicotiana tabacum HOM05D003436 ORTHO05D003674 2.8e-06 55.5 44 65.9
Nitab4.5_0008334g0020 Nicotiana tabacum HOM05D003436 ORTHO05D003674 2.8e-06 55.5 44 72.7
Oeu034263.1 Olea europaea HOM05D008970 ORTHO05D003674 2.8e-06 55.5 44 68.2
Phvul.001G143100 Phaseolus vulgaris HOM05D003436 ORTHO05D003674 2.8e-06 55.5 43 65.1
Solyc10g078760.2 Solanum lycopersicum HOM05D003436 ORTHO05D003674 2.8e-06 55.5 44 68.2
TWI74G0976 Tripterygium wilfordii HOM05D003436 ORTHO05D003674 2.8e-06 55.5 103 40.8
Actinidia32389 Actinidia chinensis HOM05D003436 ORTHO05D003674 3.7e-06 55.1 44 68.2
CARHR206420 Cardamine hirsuta HOM05D003436 ORTHO05D003674 3.7e-06 55.1 44 65.9
Nitab4.5_0002343g0050 Nicotiana tabacum HOM05D003436 ORTHO05D003674 3.7e-06 55.1 98 41.8
arahy.Tifrunner.gnm1.ann1.6M6V4C Arachis hypogaea HOM05D003436 ORTHO05D003674 4.8e-06 54.7 43 65.1
Ca_08518_v3 Cicer arietinum L. HOM05D003436 ORTHO05D003674 4.8e-06 54.7 43 69.8
Cc06_g15980 Coffea canephora HOM05D003436 ORTHO05D003674 4.8e-06 54.7 93 43.0
Lj1g0001300 Lotus japonicus HOM05D003436 ORTHO05D003674 4.8e-06 54.7 43 67.4
Peaxi162Scf00258g00520 Petunia axillaris HOM05D003436 ORTHO05D003674 4.8e-06 54.7 44 68.2
SalBow4G2804 Salvia bowleyana HOM05D003436 ORTHO05D003674 4.8e-06 54.7 39 71.8
CAN.G1161.30 Capsicum annuum HOM05D003436 ORTHO05D003674 6.3e-06 54.3 35 77.1
MD12G1057800 Malus domestica HOM05D003436 ORTHO05D003674 6.3e-06 54.3 42 69.0
MBI04_g39831_MAGBIO Magnolia biondii HOM05D003436 ORTHO05D003674 8.2e-06 53.9 42 66.7
Psat6g120960 Pisum sativum HOM05D003436 ORTHO05D003674 8.2e-06 53.9 44 63.6


User provided reference genes

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